RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
TRIO-224ENST00000620511 CARD14Q9BXL6 1004 aa13.34□□□□□ -0.27
TRIO-224ENST00000620511 ANKRD36BQ8N2N9 1353 aa13.34□□□□□ -0.27
TRIO-224ENST00000620511 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
TRIO-224ENST00000620511 SHPRHQ149N8 1683 aa13.33□□□□□ -0.28
TRIO-224ENST00000620511 TNS3Q68CZ2 1445 aa13.33□□□□□ -0.28
TRIO-224ENST00000620511 MARF1Q9Y4F3 1742 aaKnown RBP13.33□□□□□ -0.28
TRIO-224ENST00000620511 LRRC59Q96AG4 307 aaKnown RBP13.33□□□□□ -0.28
TRIO-224ENST00000620511 POLR3GLQ9BT43 218 aa13.33□□□□□ -0.28
TRIO-224ENST00000620511 KTN1Q86UP2 1357 aaKnown RBP13.33□□□□□ -0.28
TRIO-224ENST00000620511 PNPLA6Q8IY17 1366 aa13.33□□□□□ -0.28
TRIO-224ENST00000620511 PIK3C2AO00443 1686 aa13.33□□□□□ -0.28
TRIO-224ENST00000620511 COL22A1Q8NFW1 1626 aaPredicted RBP13.32□□□□□ -0.28
TRIO-224ENST00000620511 TERF2IPQ9NYB0 399 aa13.32□□□□□ -0.28
TRIO-224ENST00000620511 CRYBG1Q9Y4K1 1723 aa13.32□□□□□ -0.28
TRIO-224ENST00000620511 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
TRIO-224ENST00000620511 BRD4O60885 1362 aaPredicted RBP13.31□□□□□ -0.28
TRIO-224ENST00000620511 ZNF316A6NFI3 1004 aaPredicted RBP13.31□□□□□ -0.28
TRIO-224ENST00000620511 EDC4Q6P2E9 1401 aaKnown RBP13.31□□□□□ -0.28
TRIO-224ENST00000620511 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
TRIO-224ENST00000620511 PANK3Q9H999 370 aa13.3□□□□□ -0.28
TRIO-224ENST00000620511 JCADQ9P266 1359 aa13.3□□□□□ -0.28
TRIO-224ENST00000620511 MED1Q15648 1581 aaPredicted RBP13.29□□□□□ -0.28
TRIO-224ENST00000620511 ABCA3Q99758 1704 aa13.29□□□□□ -0.28
TRIO-224ENST00000620511 USP54Q70EL1 1684 aa13.29□□□□□ -0.28
TRIO-224ENST00000620511 PER1O15534 1290 aaPredicted RBP13.29□□□□□ -0.28
TRIO-224ENST00000620511 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
TRIO-224ENST00000620511 ZRANB1Q9UGI0 708 aa13.29□□□□□ -0.28
TRIO-224ENST00000620511 NSD3Q9BZ95 1437 aa13.28□□□□□ -0.28
TRIO-224ENST00000620511 TTC21AQ8NDW8 1320 aa13.27□□□□□ -0.28
TRIO-224ENST00000620511 ARHGEF10O15013 1369 aa13.27□□□□□ -0.28
TRIO-224ENST00000620511 NUTM2GQ5VZR2 741 aa13.27□□□□□ -0.29
TRIO-224ENST00000620511 NME9Q86XW9 330 aa13.27□□□□□ -0.29
TRIO-224ENST00000620511 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRIO-224ENST00000620511 ABTB2Q8N961 1025 aa13.27□□□□□ -0.29
TRIO-224ENST00000620511 CABLES1Q8TDN4 633 aa13.27□□□□□ -0.29
TRIO-224ENST00000620511 USP31Q70CQ4 1352 aa13.26□□□□□ -0.29
TRIO-224ENST00000620511 LRP6O75581 1613 aa13.26□□□□□ -0.29
TRIO-224ENST00000620511 FYB1O15117 783 aa13.26□□□□□ -0.29
TRIO-224ENST00000620511 USP19O94966 1318 aa13.26□□□□□ -0.29
TRIO-224ENST00000620511 PHRF1Q9P1Y6 1649 aaKnown RBP13.26□□□□□ -0.29
TRIO-224ENST00000620511 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
TRIO-224ENST00000620511 OVOS2A0A0J9YW53 1432 aa13.25□□□□□ -0.29
TRIO-224ENST00000620511 OVOS2Q6IE36 1432 aa13.25□□□□□ -0.29
TRIO-224ENST00000620511 SLIT3O75094 1523 aa13.25□□□□□ -0.29
TRIO-224ENST00000620511 LMOD2Q6P5Q4 547 aa13.24□□□□□ -0.29
TRIO-224ENST00000620511 NLRP6P59044 892 aa13.23□□□□□ -0.29
TRIO-224ENST00000620511 DIEXFQ68CQ4 756 aaKnown RBP13.23□□□□□ -0.29
TRIO-224ENST00000620511 SPATA31A6Q5VVP1 1343 aa13.23□□□□□ -0.29
TRIO-224ENST00000620511 AMER1Q5JTC6 1135 aaPredicted RBP13.23□□□□□ -0.29
TRIO-224ENST00000620511 NLRP13Q86W25 1043 aa13.22□□□□□ -0.29
TRIO-224ENST00000620511 GGNBP2Q9H3C7 697 aa13.22□□□□□ -0.29
TRIO-224ENST00000620511 ANKRD26Q9UPS8 1709 aa13.22□□□□□ -0.29
TRIO-224ENST00000620511 NFAT5O94916 1531 aa13.21□□□□□ -0.29
TRIO-224ENST00000620511 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
TRIO-224ENST00000620511 DDX10Q13206 875 aaKnown RBP13.21□□□□□ -0.29
TRIO-224ENST00000620511 NUTM2BA6NNL0 878 aaPredicted RBP13.2□□□□□ -0.3
TRIO-224ENST00000620511 NUTM2EB1AL46 878 aaPredicted RBP13.2□□□□□ -0.3
TRIO-224ENST00000620511 GCP02774 474 aa13.2□□□□□ -0.3
TRIO-224ENST00000620511 NUTM2AQ8IVF1 878 aaPredicted RBP13.2□□□□□ -0.3
TRIO-224ENST00000620511 CGNL1Q0VF96 1302 aa13.19□□□□□ -0.3
TRIO-224ENST00000620511 FBLN1P23142 703 aa13.19□□□□□ -0.3
TRIO-224ENST00000620511 COL18A1P39060 1754 aa13.19□□□□□ -0.3
TRIO-224ENST00000620511 ADAMTS2O95450 1211 aa13.18□□□□□ -0.3
TRIO-224ENST00000620511 KNSTRNQ9Y448 316 aa13.18□□□□□ -0.3
TRIO-224ENST00000620511 CPDO75976 1380 aa13.17□□□□□ -0.3
TRIO-224ENST00000620511 NPC1L1Q9UHC9 1359 aa13.17□□□□□ -0.3
TRIO-224ENST00000620511 FAM83GA6ND36 823 aa13.17□□□□□ -0.3
TRIO-224ENST00000620511 COG3Q96JB2 828 aa13.17□□□□□ -0.3
TRIO-224ENST00000620511 LTN1O94822 1766 aa13.16□□□□□ -0.3
TRIO-224ENST00000620511 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
TRIO-224ENST00000620511 LMO7Q8WWI1 1683 aa13.16□□□□□ -0.3
TRIO-224ENST00000620511 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
TRIO-224ENST00000620511 ARHGEF25Q86VW2 580 aa13.16□□□□□ -0.3
TRIO-224ENST00000620511 NSD2O96028 1365 aa13.16□□□□□ -0.3
TRIO-224ENST00000620511 RGPD5Q99666 1765 aa13.15□□□□□ -0.3
TRIO-224ENST00000620511 ZC3H6P61129 1189 aaKnown RBP13.15□□□□□ -0.3
TRIO-224ENST00000620511 KCNH5Q8NCM2 988 aa13.15□□□□□ -0.3
TRIO-224ENST00000620511 PLCH1Q4KWH8 1693 aa13.15□□□□□ -0.3
TRIO-224ENST00000620511 SOX12O15370 315 aa13.14□□□□□ -0.31
TRIO-224ENST00000620511 RGS17Q9UGC6 210 aaPredicted RBP13.14□□□□□ -0.31
TRIO-224ENST00000620511 SLIT2O94813 1529 aa13.14□□□□□ -0.31
TRIO-224ENST00000620511 COL14A1Q05707 1796 aaKnown RBP13.14□□□□□ -0.31
TRIO-224ENST00000620511 PEAK1Q9H792 1746 aa13.14□□□□□ -0.31
TRIO-224ENST00000620511 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
TRIO-224ENST00000620511 CHRNA2Q15822 529 aa13.13□□□□□ -0.31
TRIO-224ENST00000620511 CC2D1BQ5T0F9 858 aaKnown RBP13.13□□□□□ -0.31
TRIO-224ENST00000620511 FNBP4Q8N3X1 1017 aaPredicted RBP13.13□□□□□ -0.31
TRIO-224ENST00000620511 BCL9LQ86UU0 1499 aa13.13□□□□□ -0.31
TRIO-224ENST00000620511 HAP1P54257 671 aaPredicted RBP13.13□□□□□ -0.31
TRIO-224ENST00000620511 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
TRIO-224ENST00000620511 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
TRIO-224ENST00000620511 NRAPQ86VF7 1730 aa13.13□□□□□ -0.31
TRIO-224ENST00000620511 NWD2Q9ULI1 1742 aa13.13□□□□□ -0.31
TRIO-224ENST00000620511 MAP3K19Q56UN5 1328 aa13.12□□□□□ -0.31
TRIO-224ENST00000620511 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
TRIO-224ENST00000620511 PRDM11Q9NQV5 511 aa13.12□□□□□ -0.31
TRIO-224ENST00000620511 AATKQ6ZMQ8 1374 aa13.12□□□□□ -0.31
TRIO-224ENST00000620511 AFF2P51816 1311 aa13.11□□□□□ -0.31
TRIO-224ENST00000620511 TNNT2P45379 298 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms