RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, human

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-223	ENST00000620507	MADD	Q8WXG6	1647 aa		11.55	□□□□□ -0.56
RBFOX1-223	ENST00000620507	ZNF521	Q96K83	1311 aa		11.55	□□□□□ -0.56
RBFOX1-223	ENST00000620507	API5	Q9BZZ5	524 aa	Known RBP	11.55	□□□□□ -0.56
RBFOX1-223	ENST00000620507	NEO1	Q92859	1461 aa		11.54	□□□□□ -0.56
RBFOX1-223	ENST00000620507		A0A1W2PP64	1363 aa		11.54	□□□□□ -0.56
RBFOX1-223	ENST00000620507	KIF1B	O60333	1816 aa		11.54	□□□□□ -0.56
RBFOX1-223	ENST00000620507	RRS1	Q15050	365 aa	Known RBP	11.54	□□□□□ -0.56
RBFOX1-223	ENST00000620507	NFKBIB	Q15653	356 aa		11.54	□□□□□ -0.56
RBFOX1-223	ENST00000620507	LAMC1	P11047	1609 aa		11.54	□□□□□ -0.56
RBFOX1-223	ENST00000620507	EFCAB6	Q5THR3	1501 aa		11.54	□□□□□ -0.56
RBFOX1-223	ENST00000620507	ABCC11	Q96J66	1382 aa		11.54	□□□□□ -0.56
RBFOX1-223	ENST00000620507	SLC4A10	Q6U841	1118 aa		11.54	□□□□□ -0.56
RBFOX1-223	ENST00000620507	STK31	Q9BXU1	1019 aa		11.54	□□□□□ -0.56
RBFOX1-223	ENST00000620507	WASL	O00401	505 aa	Predicted RBP	11.53	□□□□□ -0.56
RBFOX1-223	ENST00000620507	FBLN1	P23142	703 aa		11.53	□□□□□ -0.56
RBFOX1-223	ENST00000620507	NME9	Q86XW9	330 aa		11.53	□□□□□ -0.56
RBFOX1-223	ENST00000620507	NFE2L2	Q16236	605 aa		11.53	□□□□□ -0.56
RBFOX1-223	ENST00000620507	EMILIN1	Q9Y6C2	1016 aa		11.53	□□□□□ -0.56
RBFOX1-223	ENST00000620507	TWISTNB	Q3B726	338 aa	Predicted RBP	11.52	□□□□□ -0.56
RBFOX1-223	ENST00000620507	LTV1	Q96GA3	475 aa	Predicted RBP	11.52	□□□□□ -0.56
RBFOX1-223	ENST00000620507	THUMPD2	Q9BTF0	503 aa	Known RBP	11.52	□□□□□ -0.56
RBFOX1-223	ENST00000620507	CFAP44	Q96MT7	982 aa		11.52	□□□□□ -0.57
RBFOX1-223	ENST00000620507	GOLGA6L22	H0YM25	854 aa		11.52	□□□□□ -0.57
RBFOX1-223	ENST00000620507	SLC26A8	Q96RN1	970 aa		11.52	□□□□□ -0.57
RBFOX1-223	ENST00000620507	ABCA9	Q8IUA7	1624 aa		11.52	□□□□□ -0.57
RBFOX1-223	ENST00000620507	MAP3K4	Q9Y6R4	1608 aa		11.52	□□□□□ -0.57
RBFOX1-223	ENST00000620507	KDM2B	Q8NHM5	1336 aa		11.52	□□□□□ -0.57
RBFOX1-223	ENST00000620507	TRIM27	P14373	513 aa		11.51	□□□□□ -0.57
RBFOX1-223	ENST00000620507	GSE1	Q14687	1217 aa		11.51	□□□□□ -0.57
RBFOX1-223	ENST00000620507	SULT6B1	Q6IMI4	303 aa		11.51	□□□□□ -0.57
RBFOX1-223	ENST00000620507	TRMT2A	Q8IZ69	625 aa	Known RBP	11.51	□□□□□ -0.57
RBFOX1-223	ENST00000620507	TMEM57	Q8N5G2	664 aa		11.51	□□□□□ -0.57
RBFOX1-223	ENST00000620507	CFAP74	Q9C0B2	1584 aa		11.51	□□□□□ -0.57
RBFOX1-223	ENST00000620507	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.51	□□□□□ -0.57
RBFOX1-223	ENST00000620507	ZNF428	Q96B54	188 aa		11.51	□□□□□ -0.57
RBFOX1-223	ENST00000620507	PCDHB15	Q9Y5E8	787 aa		11.51	□□□□□ -0.57
RBFOX1-223	ENST00000620507	ANP32B	Q92688	251 aa	Known RBP	11.51	□□□□□ -0.57
RBFOX1-223	ENST00000620507	C22orf23	Q9BZE7	217 aa		11.51	□□□□□ -0.57
RBFOX1-223	ENST00000620507	TNN	Q9UQP3	1299 aa		11.5	□□□□□ -0.57
RBFOX1-223	ENST00000620507	YEATS2	Q9ULM3	1422 aa		11.5	□□□□□ -0.57
RBFOX1-223	ENST00000620507	HMMR	O75330	724 aa		11.5	□□□□□ -0.57
RBFOX1-223	ENST00000620507	RLBP1	P12271	317 aa		11.5	□□□□□ -0.57
RBFOX1-223	ENST00000620507	RNF17	Q9BXT8	1623 aa	Known RBP	11.5	□□□□□ -0.57
RBFOX1-223	ENST00000620507	C8orf34	Q49A92	452 aa		11.49	□□□□□ -0.57
RBFOX1-223	ENST00000620507	IL16	Q14005	1332 aa		11.49	□□□□□ -0.57
RBFOX1-223	ENST00000620507	C1orf115	Q9H7X2	142 aa		11.49	□□□□□ -0.57
RBFOX1-223	ENST00000620507	HECW2	Q9P2P5	1572 aa		11.49	□□□□□ -0.57
RBFOX1-223	ENST00000620507	ALDH1L2	Q3SY69	923 aa		11.48	□□□□□ -0.57
RBFOX1-223	ENST00000620507	INO80	Q9ULG1	1556 aa	Predicted RBP	11.48	□□□□□ -0.57
RBFOX1-223	ENST00000620507	POLK	Q9UBT6	870 aa		11.48	□□□□□ -0.57
RBFOX1-223	ENST00000620507	RIMS2	Q9UQ26	1411 aa		11.48	□□□□□ -0.57
RBFOX1-223	ENST00000620507	NLRP6	P59044	892 aa		11.47	□□□□□ -0.57
RBFOX1-223	ENST00000620507	PKNOX2	Q96KN3	472 aa		11.47	□□□□□ -0.57
RBFOX1-223	ENST00000620507	TSPYL4	Q9UJ04	414 aa		11.47	□□□□□ -0.57
RBFOX1-223	ENST00000620507	ABCC3	O15438	1527 aa		11.47	□□□□□ -0.57
RBFOX1-223	ENST00000620507	FRAT2	O75474	233 aa	Predicted RBP	11.46	□□□□□ -0.57
RBFOX1-223	ENST00000620507	CEP152	O94986	1710 aa		11.46	□□□□□ -0.57
RBFOX1-223	ENST00000620507	GZF1	Q9H116	711 aa	Predicted RBP	11.46	□□□□□ -0.57
RBFOX1-223	ENST00000620507	DCTN1	Q14203	1278 aa		11.46	□□□□□ -0.58
RBFOX1-223	ENST00000620507	NUTM2G	Q5VZR2	741 aa		11.46	□□□□□ -0.58
RBFOX1-223	ENST00000620507	GCC1	Q96CN9	775 aa		11.46	□□□□□ -0.58
RBFOX1-223	ENST00000620507	IFT57	Q9NWB7	429 aa		11.46	□□□□□ -0.58
RBFOX1-223	ENST00000620507	ABCA6	Q8N139	1617 aa		11.45	□□□□□ -0.58
RBFOX1-223	ENST00000620507	NCL	P19338	710 aa	Known RBP	11.44	□□□□□ -0.58
RBFOX1-223	ENST00000620507	OS9	Q13438	667 aa	Predicted RBP	11.44	□□□□□ -0.58
RBFOX1-223	ENST00000620507	CHD1L	Q86WJ1	897 aa		11.44	□□□□□ -0.58
RBFOX1-223	ENST00000620507	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.44	□□□□□ -0.58
RBFOX1-223	ENST00000620507	L1TD1	Q5T7N2	865 aa	Known RBP	11.44	□□□□□ -0.58
RBFOX1-223	ENST00000620507	GBP4	Q96PP9	640 aa		11.44	□□□□□ -0.58
RBFOX1-223	ENST00000620507	FOXD4L1	Q9NU39	408 aa		11.44	□□□□□ -0.58
RBFOX1-223	ENST00000620507	ZRANB1	Q9UGI0	708 aa		11.44	□□□□□ -0.58
RBFOX1-223	ENST00000620507	PPIP5K1	Q6PFW1	1433 aa		11.44	□□□□□ -0.58
RBFOX1-223	ENST00000620507	CEBPA	P49715	358 aa	Predicted RBP	11.44	□□□□□ -0.58
RBFOX1-223	ENST00000620507	NECTIN2	Q92692	538 aa		11.44	□□□□□ -0.58
RBFOX1-223	ENST00000620507	TRIM35	Q9UPQ4	493 aa		11.44	□□□□□ -0.58
RBFOX1-223	ENST00000620507	NCBP3	Q53F19	620 aa	Known RBP	11.43	□□□□□ -0.58
RBFOX1-223	ENST00000620507	LMTK2	Q8IWU2	1503 aa		11.43	□□□□□ -0.58
RBFOX1-223	ENST00000620507	PPRC1	Q5VV67	1664 aa	Known RBP	11.43	□□□□□ -0.58
RBFOX1-223	ENST00000620507	PHACTR3	Q96KR7	559 aa		11.43	□□□□□ -0.58
RBFOX1-223	ENST00000620507	CHMP4A	Q9BY43	222 aa		11.43	□□□□□ -0.58
RBFOX1-223	ENST00000620507	ADGRB3	O60242	1522 aa		11.43	□□□□□ -0.58
RBFOX1-223	ENST00000620507	IQGAP1	P46940	1657 aa		11.42	□□□□□ -0.58
RBFOX1-223	ENST00000620507	TNR	Q92752	1358 aa		11.42	□□□□□ -0.58
RBFOX1-223	ENST00000620507	FKBP5	Q13451	457 aa	Predicted RBP	11.42	□□□□□ -0.58
RBFOX1-223	ENST00000620507	CHMP5	Q9NZZ3	219 aa		11.42	□□□□□ -0.58
RBFOX1-223	ENST00000620507	ABTB2	Q8N961	1025 aa		11.42	□□□□□ -0.58
RBFOX1-223	ENST00000620507	MBIP	Q9NS73	344 aa		11.42	□□□□□ -0.58
RBFOX1-223	ENST00000620507	NCKAP5L	Q9HCH0	1330 aa		11.42	□□□□□ -0.58
RBFOX1-223	ENST00000620507	FAM83G	A6ND36	823 aa		11.42	□□□□□ -0.58
RBFOX1-223	ENST00000620507	ZFYVE9	O95405	1425 aa		11.42	□□□□□ -0.58
RBFOX1-223	ENST00000620507	SLC4A2	P04920	1241 aa		11.42	□□□□□ -0.58
RBFOX1-223	ENST00000620507	MCM10	Q7L590	875 aa		11.42	□□□□□ -0.58
RBFOX1-223	ENST00000620507	GAS2L2	Q8NHY3	880 aa		11.42	□□□□□ -0.58
RBFOX1-223	ENST00000620507	KIDINS220	Q9ULH0	1771 aa		11.41	□□□□□ -0.58
RBFOX1-223	ENST00000620507	MCC	P23508	829 aa		11.41	□□□□□ -0.58
RBFOX1-223	ENST00000620507	HDAC1	Q13547	482 aa	Predicted RBP	11.41	□□□□□ -0.58
RBFOX1-223	ENST00000620507	ZMYM3	Q14202	1370 aa		11.41	□□□□□ -0.58
RBFOX1-223	ENST00000620507	RSPH6A	Q9H0K4	717 aa		11.41	□□□□□ -0.58
RBFOX1-223	ENST00000620507	ACE	P12821	1306 aa		11.41	□□□□□ -0.58
RBFOX1-223	ENST00000620507	ARHGAP31	Q2M1Z3	1444 aa		11.41	□□□□□ -0.58

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