RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 NCLP19338 710 aaKnown RBP20.13■□□□□ 0.81
DKC1-213ENST00000620277 L1TD1Q5T7N2 865 aaKnown RBP20.13■□□□□ 0.81
DKC1-213ENST00000620277 CDK19Q9BWU1 502 aa20.13■□□□□ 0.81
DKC1-213ENST00000620277 FOXD4L5Q5VV16 416 aaPredicted RBP20.13■□□□□ 0.81
DKC1-213ENST00000620277 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
DKC1-213ENST00000620277 FOXD4L4Q8WXT5 416 aaPredicted RBP20.13■□□□□ 0.81
DKC1-213ENST00000620277 ZBTB40Q9NUA8 1239 aa20.13■□□□□ 0.81
DKC1-213ENST00000620277 CD109Q6YHK3 1445 aa20.13■□□□□ 0.81
DKC1-213ENST00000620277 ZNF518AQ6AHZ1 1483 aa20.12■□□□□ 0.81
DKC1-213ENST00000620277 RRS1Q15050 365 aaKnown RBP20.12■□□□□ 0.81
DKC1-213ENST00000620277 KRT24Q2M2I5 525 aa20.12■□□□□ 0.81
DKC1-213ENST00000620277 CHD1LQ86WJ1 897 aa20.12■□□□□ 0.81
DKC1-213ENST00000620277 NINLQ9Y2I6 1382 aa20.12■□□□□ 0.81
DKC1-213ENST00000620277 C16orf71Q8IYS4 520 aaPredicted RBP20.11■□□□□ 0.81
DKC1-213ENST00000620277 TERF2IPQ9NYB0 399 aa20.11■□□□□ 0.81
DKC1-213ENST00000620277 CCDC27Q2M243 656 aa20.1■□□□□ 0.81
DKC1-213ENST00000620277 IPO8O15397 1037 aaKnown RBP20.1■□□□□ 0.81
DKC1-213ENST00000620277 TNPO1Q92973 898 aaKnown RBP20.09■□□□□ 0.81
DKC1-213ENST00000620277 MROH2AA6NES4 1674 aa20.09■□□□□ 0.81
DKC1-213ENST00000620277 ASXL2Q76L83 1435 aa20.09■□□□□ 0.81
DKC1-213ENST00000620277 ANKRD36BQ8N2N9 1353 aa20.09■□□□□ 0.81
DKC1-213ENST00000620277 HDGFL2Q7Z4V5 671 aaPredicted RBP20.08■□□□□ 0.81
DKC1-213ENST00000620277 TET3O43151 1660 aa20.08■□□□□ 0.8
DKC1-213ENST00000620277 ZBTB7CA1YPR0 619 aa20.07■□□□□ 0.8
DKC1-213ENST00000620277 CHAMP1Q96JM3 812 aa20.07■□□□□ 0.8
DKC1-213ENST00000620277 SMC5Q8IY18 1101 aa20.07■□□□□ 0.8
DKC1-213ENST00000620277 HDAC1Q13547 482 aaPredicted RBP20.06■□□□□ 0.8
DKC1-213ENST00000620277 NME9Q86XW9 330 aa20.06■□□□□ 0.8
DKC1-213ENST00000620277 SMARCA5O60264 1052 aaPredicted RBP20.06■□□□□ 0.8
DKC1-213ENST00000620277 NUCB1Q02818 461 aa20.06■□□□□ 0.8
DKC1-213ENST00000620277 GAS2L3Q86XJ1 694 aa20.06■□□□□ 0.8
DKC1-213ENST00000620277 SSFA2P28290 1259 aa20.05■□□□□ 0.8
DKC1-213ENST00000620277 C8orf58Q8NAV2 365 aa20.05■□□□□ 0.8
DKC1-213ENST00000620277 MIS18AQ9NYP9 233 aa20.05■□□□□ 0.8
DKC1-213ENST00000620277 TBC1D9Q6ZT07 1266 aa20.04■□□□□ 0.8
DKC1-213ENST00000620277 OTUD7AQ8TE49 926 aaPredicted RBP20.04■□□□□ 0.8
DKC1-213ENST00000620277 PNNQ9H307 717 aaKnown RBP20.04■□□□□ 0.8
DKC1-213ENST00000620277 IQSEC2Q5JU85 1478 aa20.04■□□□□ 0.8
DKC1-213ENST00000620277 KIF1BO60333 1816 aa20.04■□□□□ 0.8
DKC1-213ENST00000620277 NOL8Q76FK4 1167 aaKnown RBP20.04■□□□□ 0.8
DKC1-213ENST00000620277 FOXD4L6Q3SYB3 417 aaPredicted RBP20.04■□□□□ 0.8
DKC1-213ENST00000620277 FOXD4L3Q6VB84 417 aaPredicted RBP20.04■□□□□ 0.8
DKC1-213ENST00000620277 SHPRHQ149N8 1683 aa20.03■□□□□ 0.8
DKC1-213ENST00000620277 POLKQ9UBT6 870 aa20.03■□□□□ 0.8
DKC1-213ENST00000620277 MYOM2P54296 1465 aa20.02■□□□□ 0.8
DKC1-213ENST00000620277 GRPEL1Q9HAV7 217 aa20.02■□□□□ 0.8
DKC1-213ENST00000620277 KIF16BQ96L93 1317 aa20.02■□□□□ 0.8
DKC1-213ENST00000620277 PLEKHG5O94827 1062 aa20.02■□□□□ 0.8
DKC1-213ENST00000620277 SIRT2Q8IXJ6 389 aa20.02■□□□□ 0.8
DKC1-213ENST00000620277 MBIPQ9NS73 344 aa20.02■□□□□ 0.8
DKC1-213ENST00000620277 PPRC1Q5VV67 1664 aaKnown RBP20.02■□□□□ 0.79
DKC1-213ENST00000620277 GAS2L2Q8NHY3 880 aa20.01■□□□□ 0.79
DKC1-213ENST00000620277 TWISTNBQ3B726 338 aaPredicted RBP20.01■□□□□ 0.79
DKC1-213ENST00000620277 ZBTB7BO15156 539 aaPredicted RBP20.01■□□□□ 0.79
DKC1-213ENST00000620277 VAMP4O75379 141 aa20.01■□□□□ 0.79
DKC1-213ENST00000620277 SBNO2Q9Y2G9 1366 aa20■□□□□ 0.79
DKC1-213ENST00000620277 NECTIN2Q92692 538 aa20■□□□□ 0.79
DKC1-213ENST00000620277 TSHZ3Q63HK5 1081 aa19.99■□□□□ 0.79
DKC1-213ENST00000620277 SLC4A10Q6U841 1118 aa19.99■□□□□ 0.79
DKC1-213ENST00000620277 TRIM44Q96DX7 344 aaPredicted RBP19.99■□□□□ 0.79
DKC1-213ENST00000620277 RSPH6AQ9H0K4 717 aa19.99■□□□□ 0.79
DKC1-213ENST00000620277 AAMPQ13685 434 aa19.99■□□□□ 0.79
DKC1-213ENST00000620277 TXNDC2Q86VQ3 553 aa19.99■□□□□ 0.79
DKC1-213ENST00000620277 QRICH2Q9H0J4 1663 aa19.99■□□□□ 0.79
DKC1-213ENST00000620277 EFCAB6Q5THR3 1501 aa19.99■□□□□ 0.79
DKC1-213ENST00000620277 SHROOM2Q13796 1616 aa19.98■□□□□ 0.79
DKC1-213ENST00000620277 AEBP1Q8IUX7 1158 aa19.98■□□□□ 0.79
DKC1-213ENST00000620277 ZNF692Q9BU19 519 aaPredicted RBP19.98■□□□□ 0.79
DKC1-213ENST00000620277 TULP4Q9NRJ4 1543 aa19.97■□□□□ 0.79
DKC1-213ENST00000620277 PKP1Q13835 747 aa19.97■□□□□ 0.79
DKC1-213ENST00000620277 MCM10Q7L590 875 aa19.97■□□□□ 0.79
DKC1-213ENST00000620277 MROH1Q8NDA8 1641 aa19.97■□□□□ 0.79
DKC1-213ENST00000620277 MRPL50Q8N5N7 158 aaKnown RBP19.96■□□□□ 0.79
DKC1-213ENST00000620277 KIF2CQ99661 725 aa19.96■□□□□ 0.79
DKC1-213ENST00000620277 MCTP1Q6DN14 999 aa19.96■□□□□ 0.79
DKC1-213ENST00000620277 DDX49Q9Y6V7 483 aaKnown RBP19.96■□□□□ 0.79
DKC1-213ENST00000620277 ERBB4Q15303 1308 aa19.95■□□□□ 0.78
DKC1-213ENST00000620277 FCHSD2O94868 740 aa19.95■□□□□ 0.78
DKC1-213ENST00000620277 FSD2A1L4K1 749 aa19.94■□□□□ 0.78
DKC1-213ENST00000620277 DDX11L8A8MPP1 907 aa19.94■□□□□ 0.78
DKC1-213ENST00000620277 DTNBO60941 627 aa19.94■□□□□ 0.78
DKC1-213ENST00000620277 PPIP5K1Q6PFW1 1433 aa19.94■□□□□ 0.78
DKC1-213ENST00000620277 MRE11P49959 708 aa19.94■□□□□ 0.78
DKC1-213ENST00000620277 NFE2L2Q16236 605 aa19.94■□□□□ 0.78
DKC1-213ENST00000620277 ABCC11Q96J66 1382 aa19.94■□□□□ 0.78
DKC1-213ENST00000620277 RPGRIP1LQ68CZ1 1315 aa19.93■□□□□ 0.78
DKC1-213ENST00000620277 GSPT1P15170 499 aaKnown RBP19.93■□□□□ 0.78
DKC1-213ENST00000620277 GBP4Q96PP9 640 aa19.93■□□□□ 0.78
DKC1-213ENST00000620277 ARID3AQ99856 593 aa19.93■□□□□ 0.78
DKC1-213ENST00000620277 ADGRB1O14514 1584 aa19.93■□□□□ 0.78
DKC1-213ENST00000620277 K7ELQ4 463 aaPredicted RBP19.92■□□□□ 0.78
DKC1-213ENST00000620277 CT47B1P0C2W7 299 aaPredicted RBP19.92■□□□□ 0.78
DKC1-213ENST00000620277 F6X3S4 739 aa19.91■□□□□ 0.78
DKC1-213ENST00000620277 BMP2KLQ5H9B9 411 aa19.91■□□□□ 0.78
DKC1-213ENST00000620277 INO80Q9ULG1 1556 aaPredicted RBP19.91■□□□□ 0.78
DKC1-213ENST00000620277 MPNDQ8N594 471 aa19.91■□□□□ 0.78
DKC1-213ENST00000620277 DEPDC5O75140 1603 aa19.91■□□□□ 0.78
DKC1-213ENST00000620277 RBM25P49756 843 aaKnown RBP19.91■□□□□ 0.78
DKC1-213ENST00000620277 SULT6B1Q6IMI4 303 aa19.91■□□□□ 0.78
DKC1-213ENST00000620277 VWDEQ8N2E2 1590 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms