RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 DDX46Q7L014 1031 aaKnown RBP5.57□□□□□ -1.52
CHL1-216ENST00000620033 TPM4P67936 248 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 CERKQ8TCT0 537 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 VEZTQ9HBM0 779 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 FHOD3Q2V2M9 1422 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 SCAPERQ9BY12 1400 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 CCDC88BA6NC98 1476 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 MYL6BP14649 208 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 SMARCC1Q92922 1105 aaPredicted RBP5.56□□□□□ -1.52
CHL1-216ENST00000620033 RTCBQ9Y3I0 505 aaKnown RBP5.56□□□□□ -1.52
CHL1-216ENST00000620033 UQCRHLA0A096LP55 91 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 TAF12Q16514 161 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 CT47A1Q5JQC4 288 aaPredicted RBP5.56□□□□□ -1.52
CHL1-216ENST00000620033 FOXD4L1Q9NU39 408 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 IFIT2P09913 472 aaKnown RBP5.56□□□□□ -1.52
CHL1-216ENST00000620033 BRMS1Q9HCU9 246 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 SMARCA4P51532 1647 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 H0YIN7 160 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 MYCP01106 439 aaPredicted RBP5.56□□□□□ -1.52
CHL1-216ENST00000620033 TNNI2P48788 182 aa5.56□□□□□ -1.52
CHL1-216ENST00000620033 FAM98CQ17RN3 349 aaKnown RBP5.56□□□□□ -1.52
CHL1-216ENST00000620033 NBPF6Q5VWK0 638 aa5.55□□□□□ -1.52
CHL1-216ENST00000620033 NBPF5PQ86XG9 351 aaPredicted RBP5.55□□□□□ -1.52
CHL1-216ENST00000620033 DCPSQ96C86 337 aaKnown RBP5.55□□□□□ -1.52
CHL1-216ENST00000620033 NBPF4Q96M43 638 aa5.55□□□□□ -1.52
CHL1-216ENST00000620033 SETDB2Q96T68 719 aa5.55□□□□□ -1.52
CHL1-216ENST00000620033 KTN1Q86UP2 1357 aaKnown RBP5.55□□□□□ -1.52
CHL1-216ENST00000620033 FGD5Q6ZNL6 1462 aa5.55□□□□□ -1.52
CHL1-216ENST00000620033 BIRC2Q13490 618 aa5.55□□□□□ -1.52
CHL1-216ENST00000620033 ARID3AQ99856 593 aa5.55□□□□□ -1.52
CHL1-216ENST00000620033 ATF5Q9Y2D1 282 aaPredicted RBP5.55□□□□□ -1.52
CHL1-216ENST00000620033 TSPOAP1O95153 1857 aa5.55□□□□□ -1.52
CHL1-216ENST00000620033 CAVIN4Q5BKX8 364 aa5.55□□□□□ -1.52
CHL1-216ENST00000620033 STK24Q9Y6E0 443 aa5.55□□□□□ -1.52
CHL1-216ENST00000620033 ZFYVE27Q5T4F4 411 aa5.55□□□□□ -1.52
CHL1-216ENST00000620033 AFAP1Q8N556 730 aa5.55□□□□□ -1.52
CHL1-216ENST00000620033 ERC1Q8IUD2 1116 aa5.55□□□□□ -1.52
CHL1-216ENST00000620033 NPHP3Q7Z494 1330 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 CCDC85CA6NKD9 419 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 EPS15P42566 896 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 USP5P45974 858 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 TRAPPC3LQ5T215 181 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 GPHNQ9NQX3 736 aaPredicted RBP5.54□□□□□ -1.52
CHL1-216ENST00000620033 PLB1Q6P1J6 1458 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 POLR3DP05423 398 aaPredicted RBP5.54□□□□□ -1.52
CHL1-216ENST00000620033 DESP17661 470 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 CCDC152Q4G0S7 254 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 MSL1Q68DK7 614 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 ZNF530Q6P9A1 599 aaPredicted RBP5.54□□□□□ -1.52
CHL1-216ENST00000620033 DRC7Q8IY82 874 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 STK11IPQ8N1F8 1099 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 EHMT1Q9H9B1 1298 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 DENND4BO75064 1496 aaPredicted RBP5.54□□□□□ -1.52
CHL1-216ENST00000620033 FOXO3O43524 673 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 PRAM1Q96QH2 718 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 PICK1Q9NRD5 415 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 H7C1D1 291 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 CPLX3Q8WVH0 158 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 RBM17Q96I25 401 aaKnown RBP5.54□□□□□ -1.52
CHL1-216ENST00000620033 CDK5RAP3Q96JB5 506 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 PCMTD1Q96MG8 357 aaPredicted RBP5.54□□□□□ -1.52
CHL1-216ENST00000620033 NBPF3Q9H094 633 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 CABP5Q9NP86 173 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 RAI14Q9P0K7 980 aa5.54□□□□□ -1.52
CHL1-216ENST00000620033 TNRQ92752 1358 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 TOP2AP11388 1531 aaKnown RBP5.53□□□□□ -1.52
CHL1-216ENST00000620033 CCDC158Q5M9N0 1113 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 CPLX2Q6PUV4 134 aaKnown RBP5.53□□□□□ -1.52
CHL1-216ENST00000620033 DZIP1Q86YF9 867 aaKnown RBP5.53□□□□□ -1.52
CHL1-216ENST00000620033 GAS2L2Q8NHY3 880 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 AMOTL2Q9Y2J4 779 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 RTEL1-TNFRSF6BF6WH68 1400 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 DIAPH1O60610 1272 aaKnown RBP5.53□□□□□ -1.52
CHL1-216ENST00000620033 CNGA1P29973 690 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 CCDC57Q2TAC2 916 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 ERICH6BQ5W0A0 696 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 CHMP4CQ96CF2 233 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 CDK19Q9BWU1 502 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 PLEKHH2Q8IVE3 1493 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 WDR7Q9Y4E6 1490 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 WIZO95785 1651 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 DCAF1Q9Y4B6 1507 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 DNAJC2Q99543 621 aaKnown RBP5.53□□□□□ -1.52
CHL1-216ENST00000620033 KRT18P05783 430 aaKnown RBP5.53□□□□□ -1.52
CHL1-216ENST00000620033 HRCP23327 699 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 ATF7IPQ6VMQ6 1270 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 FAM200AQ8TCP9 573 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 LBHD1Q9BQE6 289 aaPredicted RBP5.53□□□□□ -1.52
CHL1-216ENST00000620033 TMOD4Q9NZQ9 345 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 KIF3AQ9Y496 699 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 PTCD1O75127 700 aaKnown RBP5.53□□□□□ -1.52
CHL1-216ENST00000620033 TNNT3P45378 269 aaPredicted RBP5.53□□□□□ -1.52
CHL1-216ENST00000620033 NIM1KQ8IY84 436 aa5.53□□□□□ -1.52
CHL1-216ENST00000620033 H3BQV1 296 aa5.52□□□□□ -1.53
CHL1-216ENST00000620033 PDE3AQ14432 1141 aa5.52□□□□□ -1.53
CHL1-216ENST00000620033 HSP90AB4PQ58FF6 505 aa5.52□□□□□ -1.53
CHL1-216ENST00000620033 IFFO2Q5TF58 517 aa5.52□□□□□ -1.53
CHL1-216ENST00000620033 B4DLN1 442 aa5.52□□□□□ -1.53
CHL1-216ENST00000620033 MRPL12P52815 198 aaKnown RBP5.52□□□□□ -1.53
CHL1-216ENST00000620033 LRRFIP2Q9Y608 721 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms