RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 BCL2L13Q9BXK5 485 aa25.11■■□□□ 1.61
LAPTM4B-204ENST00000619747 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.1■■□□□ 1.61
LAPTM4B-204ENST00000619747 NRXN3Q9Y4C0 1643 aa25.1■■□□□ 1.61
LAPTM4B-204ENST00000619747 FRAT1Q92837 279 aaPredicted RBP25.1■■□□□ 1.61
LAPTM4B-204ENST00000619747 PPIP5K1Q6PFW1 1433 aa25.08■■□□□ 1.61
LAPTM4B-204ENST00000619747 NGEFQ8N5V2 710 aa25.08■■□□□ 1.61
LAPTM4B-204ENST00000619747 BRPF3Q9ULD4 1205 aa25.08■■□□□ 1.61
LAPTM4B-204ENST00000619747 SETD1AO15047 1707 aaKnown RBP25.08■■□□□ 1.6
LAPTM4B-204ENST00000619747 DIAPH1O60610 1272 aaKnown RBP25.07■■□□□ 1.6
LAPTM4B-204ENST00000619747 NLRP1Q9C000 1473 aa25.07■■□□□ 1.6
LAPTM4B-204ENST00000619747 ROBO2Q9HCK4 1378 aa25.07■■□□□ 1.6
LAPTM4B-204ENST00000619747 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
LAPTM4B-204ENST00000619747 CCDC61Q9Y6R9 512 aa25.06■■□□□ 1.6
LAPTM4B-204ENST00000619747 EMILIN1Q9Y6C2 1016 aa25.06■■□□□ 1.6
LAPTM4B-204ENST00000619747 POLKQ9UBT6 870 aa25.05■■□□□ 1.6
LAPTM4B-204ENST00000619747 TSR2Q969E8 191 aaKnown RBP25.05■■□□□ 1.6
LAPTM4B-204ENST00000619747 MAPK8IP3Q9UPT6 1336 aa25.04■■□□□ 1.6
LAPTM4B-204ENST00000619747 DLC1Q96QB1 1528 aa25.04■■□□□ 1.6
LAPTM4B-204ENST00000619747 EID1Q9Y6B2 187 aa25.04■■□□□ 1.6
LAPTM4B-204ENST00000619747 PRR36Q9H6K5 1346 aa25.03■■□□□ 1.6
LAPTM4B-204ENST00000619747 PANK1Q8TE04 598 aa25.03■■□□□ 1.6
LAPTM4B-204ENST00000619747 HMOX1P09601 288 aa25.03■■□□□ 1.6
LAPTM4B-204ENST00000619747 PHF23Q9BUL5 403 aaPredicted RBP25.03■■□□□ 1.6
LAPTM4B-204ENST00000619747 NEFMP07197 916 aa25.02■■□□□ 1.6
LAPTM4B-204ENST00000619747 RRS1Q15050 365 aaKnown RBP25.02■■□□□ 1.6
LAPTM4B-204ENST00000619747 PLEKHF1Q96S99 279 aa25.02■■□□□ 1.6
LAPTM4B-204ENST00000619747 TMPOP42166 694 aaKnown RBP25.02■■□□□ 1.6
LAPTM4B-204ENST00000619747 WDR63Q8IWG1 891 aa25.01■■□□□ 1.59
LAPTM4B-204ENST00000619747 LAS1LQ9Y4W2 734 aaKnown RBP25.01■■□□□ 1.59
LAPTM4B-204ENST00000619747 IQSEC2Q5JU85 1478 aa25.01■■□□□ 1.59
LAPTM4B-204ENST00000619747 UBR1Q8IWV7 1749 aa25■■□□□ 1.59
LAPTM4B-204ENST00000619747 ADAMTS13Q76LX8 1427 aa25■■□□□ 1.59
LAPTM4B-204ENST00000619747 TNNQ9UQP3 1299 aa25■■□□□ 1.59
LAPTM4B-204ENST00000619747 SOX12O15370 315 aa24.99■■□□□ 1.59
LAPTM4B-204ENST00000619747 COG6Q9Y2V7 657 aa24.99■■□□□ 1.59
LAPTM4B-204ENST00000619747 RIPK4P57078 832 aa24.99■■□□□ 1.59
LAPTM4B-204ENST00000619747 CLUAP1Q96AJ1 413 aa24.98■■□□□ 1.59
LAPTM4B-204ENST00000619747 AMOTL2Q9Y2J4 779 aa24.98■■□□□ 1.59
LAPTM4B-204ENST00000619747 RARSP54136 660 aaKnown RBP24.98■■□□□ 1.59
LAPTM4B-204ENST00000619747 TRIM35Q9UPQ4 493 aa24.97■■□□□ 1.59
LAPTM4B-204ENST00000619747 PRKAR2BP31323 418 aa24.96■■□□□ 1.59
LAPTM4B-204ENST00000619747 CCDC27Q2M243 656 aa24.96■■□□□ 1.59
LAPTM4B-204ENST00000619747 COG3Q96JB2 828 aa24.96■■□□□ 1.59
LAPTM4B-204ENST00000619747 COL3A1P02461 1466 aaPredicted RBP24.95■■□□□ 1.59
LAPTM4B-204ENST00000619747 ATP7BP35670 1465 aa24.95■■□□□ 1.59
LAPTM4B-204ENST00000619747 PMFBP1Q8TBY8 1022 aa24.95■■□□□ 1.58
LAPTM4B-204ENST00000619747 CPSF1Q10570 1443 aaKnown RBP24.95■■□□□ 1.58
LAPTM4B-204ENST00000619747 MYH16Q9H6N6 1097 aa24.94■■□□□ 1.58
LAPTM4B-204ENST00000619747 FAM135BQ49AJ0 1406 aa24.94■■□□□ 1.58
LAPTM4B-204ENST00000619747 NPM2Q86SE8 214 aaKnown RBP24.93■■□□□ 1.58
LAPTM4B-204ENST00000619747 MED14O60244 1454 aa24.93■■□□□ 1.58
LAPTM4B-204ENST00000619747 PHACTR3Q96KR7 559 aa24.93■■□□□ 1.58
LAPTM4B-204ENST00000619747 PLEKHG1Q9ULL1 1385 aa24.92■■□□□ 1.58
LAPTM4B-204ENST00000619747 EXOSC9Q06265 439 aaKnown RBP24.92■■□□□ 1.58
LAPTM4B-204ENST00000619747 SIRT1Q96EB6 747 aa24.92■■□□□ 1.58
LAPTM4B-204ENST00000619747 EDC4Q6P2E9 1401 aaKnown RBP24.92■■□□□ 1.58
LAPTM4B-204ENST00000619747 ACEP12821 1306 aa24.92■■□□□ 1.58
LAPTM4B-204ENST00000619747 TCERG1O14776 1098 aaKnown RBP24.92■■□□□ 1.58
LAPTM4B-204ENST00000619747 PNPLA6Q8IY17 1366 aa24.92■■□□□ 1.58
LAPTM4B-204ENST00000619747 PTPRUQ92729 1446 aa24.91■■□□□ 1.58
LAPTM4B-204ENST00000619747 CPS1P31327 1500 aa24.91■■□□□ 1.58
LAPTM4B-204ENST00000619747 TECPR2O15040 1411 aa24.91■■□□□ 1.58
LAPTM4B-204ENST00000619747 THEMISQ8N1K5 641 aaPredicted RBP24.91■■□□□ 1.58
LAPTM4B-204ENST00000619747 RLBP1P12271 317 aa24.9■■□□□ 1.58
LAPTM4B-204ENST00000619747 THUMPD2Q9BTF0 503 aaKnown RBP24.9■■□□□ 1.58
LAPTM4B-204ENST00000619747 KIF20BQ96Q89 1820 aa24.9■■□□□ 1.58
LAPTM4B-204ENST00000619747 KDM2BQ8NHM5 1336 aa24.89■■□□□ 1.58
LAPTM4B-204ENST00000619747 MAP2P11137 1827 aaKnown RBP24.89■■□□□ 1.57
LAPTM4B-204ENST00000619747 PDE4AP27815 886 aa24.89■■□□□ 1.57
LAPTM4B-204ENST00000619747 RBM33Q96EV2 1170 aaKnown RBP24.88■■□□□ 1.57
LAPTM4B-204ENST00000619747 ANKRD26Q9UPS8 1709 aa24.88■■□□□ 1.57
LAPTM4B-204ENST00000619747 FCHSD2O94868 740 aa24.88■■□□□ 1.57
LAPTM4B-204ENST00000619747 RGS3P49796 1198 aa24.88■■□□□ 1.57
LAPTM4B-204ENST00000619747 RSPH6AQ9H0K4 717 aa24.88■■□□□ 1.57
LAPTM4B-204ENST00000619747 C3P01024 1663 aa24.88■■□□□ 1.57
LAPTM4B-204ENST00000619747 CENPQQ7L2Z9 268 aaPredicted RBP24.87■■□□□ 1.57
LAPTM4B-204ENST00000619747 ZNF692Q9BU19 519 aaPredicted RBP24.87■■□□□ 1.57
LAPTM4B-204ENST00000619747 PDE3AQ14432 1141 aa24.86■■□□□ 1.57
LAPTM4B-204ENST00000619747 IGHDP01880 384 aa24.86■■□□□ 1.57
LAPTM4B-204ENST00000619747 USP35Q9P2H5 1018 aa24.85■■□□□ 1.57
LAPTM4B-204ENST00000619747 IL13P35225 146 aa24.84■■□□□ 1.57
LAPTM4B-204ENST00000619747 TTC21BQ7Z4L5 1316 aa24.84■■□□□ 1.57
LAPTM4B-204ENST00000619747 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.84■■□□□ 1.57
LAPTM4B-204ENST00000619747 PNNQ9H307 717 aaKnown RBP24.83■■□□□ 1.57
LAPTM4B-204ENST00000619747 SMC4Q9NTJ3 1288 aa24.83■■□□□ 1.57
LAPTM4B-204ENST00000619747 TBX22Q9Y458 520 aa24.83■■□□□ 1.57
LAPTM4B-204ENST00000619747 ADGRB2O60241 1585 aa24.82■■□□□ 1.56
LAPTM4B-204ENST00000619747 KCNA6P17658 529 aa24.82■■□□□ 1.56
LAPTM4B-204ENST00000619747 CDC42BPGQ6DT37 1551 aa24.81■■□□□ 1.56
LAPTM4B-204ENST00000619747 FER1L4A9Z1Z3 1794 aa24.81■■□□□ 1.56
LAPTM4B-204ENST00000619747 NGDNQ8NEJ9 315 aaKnown RBP24.81■■□□□ 1.56
LAPTM4B-204ENST00000619747 BACH2Q9BYV9 841 aa24.81■■□□□ 1.56
LAPTM4B-204ENST00000619747 SSH1Q8WYL5 1049 aa24.8■■□□□ 1.56
LAPTM4B-204ENST00000619747 ELL2O00472 640 aaPredicted RBP24.79■■□□□ 1.56
LAPTM4B-204ENST00000619747 LRRC7Q96NW7 1537 aa24.79■■□□□ 1.56
LAPTM4B-204ENST00000619747 KNDC1Q76NI1 1749 aa24.79■■□□□ 1.56
LAPTM4B-204ENST00000619747 AEBP1Q8IUX7 1158 aa24.79■■□□□ 1.56
LAPTM4B-204ENST00000619747 PLEKHG5O94827 1062 aa24.78■■□□□ 1.56
LAPTM4B-204ENST00000619747 NUTM2GQ5VZR2 741 aa24.78■■□□□ 1.56
LAPTM4B-204ENST00000619747 FAM83GA6ND36 823 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms