RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 SLC12A5Q9H2X9 1139 aa10.87□□□□□ -0.67
C9orf72-206ENST00000619707 EXOSC9Q06265 439 aaKnown RBP10.86□□□□□ -0.67
C9orf72-206ENST00000619707 ANP32BQ92688 251 aaKnown RBP10.86□□□□□ -0.67
C9orf72-206ENST00000619707 MYO3AQ8NEV4 1616 aa10.86□□□□□ -0.67
C9orf72-206ENST00000619707 NEURL4Q96JN8 1562 aa10.86□□□□□ -0.67
C9orf72-206ENST00000619707 GOLGA6L22H0YM25 854 aa10.85□□□□□ -0.67
C9orf72-206ENST00000619707 CCDC173Q0VFZ6 552 aa10.85□□□□□ -0.67
C9orf72-206ENST00000619707 SSH1Q8WYL5 1049 aa10.85□□□□□ -0.67
C9orf72-206ENST00000619707 ADGRL1O94910 1474 aa10.85□□□□□ -0.67
C9orf72-206ENST00000619707 LNPKQ9C0E8 428 aa10.84□□□□□ -0.67
C9orf72-206ENST00000619707 NUCB1Q02818 461 aa10.84□□□□□ -0.67
C9orf72-206ENST00000619707 TMEM57Q8N5G2 664 aa10.84□□□□□ -0.67
C9orf72-206ENST00000619707 NOB1Q9ULX3 412 aaKnown RBP10.84□□□□□ -0.67
C9orf72-206ENST00000619707 DEPDC5O75140 1603 aa10.84□□□□□ -0.67
C9orf72-206ENST00000619707 FOXD4L1Q9NU39 408 aa10.84□□□□□ -0.67
C9orf72-206ENST00000619707 TRAK1Q9UPV9 953 aa10.84□□□□□ -0.67
C9orf72-206ENST00000619707 NASPP49321 788 aaPredicted RBP10.83□□□□□ -0.68
C9orf72-206ENST00000619707 AFAP1Q8N556 730 aa10.83□□□□□ -0.68
C9orf72-206ENST00000619707 ZBTB40Q9NUA8 1239 aa10.83□□□□□ -0.68
C9orf72-206ENST00000619707 UGGT1Q9NYU2 1555 aa10.83□□□□□ -0.68
C9orf72-206ENST00000619707 ZFYVE16Q7Z3T8 1539 aa10.83□□□□□ -0.68
C9orf72-206ENST00000619707 IPO8O15397 1037 aaKnown RBP10.83□□□□□ -0.68
C9orf72-206ENST00000619707 CHD1LQ86WJ1 897 aa10.83□□□□□ -0.68
C9orf72-206ENST00000619707 ADGRB2O60241 1585 aa10.83□□□□□ -0.68
C9orf72-206ENST00000619707 KIF1BO60333 1816 aa10.83□□□□□ -0.68
C9orf72-206ENST00000619707 USP32Q8NFA0 1604 aa10.83□□□□□ -0.68
C9orf72-206ENST00000619707 K7ELQ4 463 aaPredicted RBP10.83□□□□□ -0.68
C9orf72-206ENST00000619707 KIAA1211Q6ZU35 1233 aa10.83□□□□□ -0.68
C9orf72-206ENST00000619707 KIF16BQ96L93 1317 aa10.82□□□□□ -0.68
C9orf72-206ENST00000619707 KIF3BO15066 747 aa10.82□□□□□ -0.68
C9orf72-206ENST00000619707 BMP2KLQ5H9B9 411 aa10.82□□□□□ -0.68
C9orf72-206ENST00000619707 ZSCAN30Q86W11 494 aa10.82□□□□□ -0.68
C9orf72-206ENST00000619707 PPP1R9BQ96SB3 815 aa10.82□□□□□ -0.68
C9orf72-206ENST00000619707 PDCL3Q9H2J4 239 aa10.82□□□□□ -0.68
C9orf72-206ENST00000619707 CDK11BP21127 795 aaKnown RBP10.81□□□□□ -0.68
C9orf72-206ENST00000619707 MSNP26038 577 aaKnown RBP10.81□□□□□ -0.68
C9orf72-206ENST00000619707 ABCC11Q96J66 1382 aa10.81□□□□□ -0.68
C9orf72-206ENST00000619707 U2SURPO15042 1029 aaKnown RBP10.81□□□□□ -0.68
C9orf72-206ENST00000619707 DDX49Q9Y6V7 483 aaKnown RBP10.81□□□□□ -0.68
C9orf72-206ENST00000619707 TMPOP42166 694 aaKnown RBP10.81□□□□□ -0.68
C9orf72-206ENST00000619707 QRICH2Q9H0J4 1663 aa10.8□□□□□ -0.68
C9orf72-206ENST00000619707 NSD2O96028 1365 aa10.8□□□□□ -0.68
C9orf72-206ENST00000619707 SSFA2P28290 1259 aa10.8□□□□□ -0.68
C9orf72-206ENST00000619707 KIF2CQ99661 725 aa10.8□□□□□ -0.68
C9orf72-206ENST00000619707 IFT172Q9UG01 1749 aa10.8□□□□□ -0.68
C9orf72-206ENST00000619707 VWDEQ8N2E2 1590 aa10.8□□□□□ -0.68
C9orf72-206ENST00000619707 SETBP1Q9Y6X0 1596 aa10.8□□□□□ -0.68
C9orf72-206ENST00000619707 NRXN1Q9ULB1 1477 aa10.8□□□□□ -0.68
C9orf72-206ENST00000619707 CHGAP10645 457 aaKnown RBP10.8□□□□□ -0.68
C9orf72-206ENST00000619707 KLHL40Q2TBA0 621 aa10.8□□□□□ -0.68
C9orf72-206ENST00000619707 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.8□□□□□ -0.68
C9orf72-206ENST00000619707 CD2BP2O95400 341 aaKnown RBP10.79□□□□□ -0.68
C9orf72-206ENST00000619707 NOS1P29475 1434 aa10.79□□□□□ -0.68
C9orf72-206ENST00000619707 CFAP74Q9C0B2 1584 aa10.79□□□□□ -0.68
C9orf72-206ENST00000619707 IBTKQ9P2D0 1353 aaPredicted RBP10.79□□□□□ -0.68
C9orf72-206ENST00000619707 ANKRD45Q5TZF3 282 aa10.79□□□□□ -0.68
C9orf72-206ENST00000619707 TRIM35Q9UPQ4 493 aa10.79□□□□□ -0.68
C9orf72-206ENST00000619707 IL16Q14005 1332 aa10.79□□□□□ -0.68
C9orf72-206ENST00000619707 OFD1O75665 1012 aa10.79□□□□□ -0.68
C9orf72-206ENST00000619707 ZC3H13Q5T200 1668 aaKnown RBP10.79□□□□□ -0.68
C9orf72-206ENST00000619707 CD109Q6YHK3 1445 aa10.78□□□□□ -0.68
C9orf72-206ENST00000619707 MROH2AA6NES4 1674 aa10.78□□□□□ -0.68
C9orf72-206ENST00000619707 TBC1D9Q6ZT07 1266 aa10.78□□□□□ -0.68
C9orf72-206ENST00000619707 GAS2L2Q8NHY3 880 aa10.78□□□□□ -0.68
C9orf72-206ENST00000619707 GCC1Q96CN9 775 aa10.78□□□□□ -0.68
C9orf72-206ENST00000619707 BAG4O95429 457 aaKnown RBP10.78□□□□□ -0.68
C9orf72-206ENST00000619707 CLEC17AQ6ZS10 378 aa10.78□□□□□ -0.68
C9orf72-206ENST00000619707 PLEKHF1Q96S99 279 aa10.78□□□□□ -0.68
C9orf72-206ENST00000619707 RBM42Q9BTD8 480 aaKnown RBP10.78□□□□□ -0.68
C9orf72-206ENST00000619707 ANKRD36BQ8N2N9 1353 aa10.77□□□□□ -0.68
C9orf72-206ENST00000619707 ATP7AQ04656 1500 aa10.77□□□□□ -0.69
C9orf72-206ENST00000619707 INO80Q9ULG1 1556 aaPredicted RBP10.77□□□□□ -0.69
C9orf72-206ENST00000619707 RIPK4P57078 832 aa10.77□□□□□ -0.69
C9orf72-206ENST00000619707 ALDH1L2Q3SY69 923 aa10.77□□□□□ -0.69
C9orf72-206ENST00000619707 CHMP4BQ9H444 224 aaKnown RBP10.77□□□□□ -0.69
C9orf72-206ENST00000619707 NCLP19338 710 aaKnown RBP10.76□□□□□ -0.69
C9orf72-206ENST00000619707 TMEM132EQ6IEE7 984 aa10.76□□□□□ -0.69
C9orf72-206ENST00000619707 C14orf93Q9H972 538 aaKnown RBP10.76□□□□□ -0.69
C9orf72-206ENST00000619707 EVC2Q86UK5 1308 aa10.76□□□□□ -0.69
C9orf72-206ENST00000619707 CALD1Q05682 793 aaKnown RBP10.76□□□□□ -0.69
C9orf72-206ENST00000619707 TERF1P54274 439 aa10.76□□□□□ -0.69
C9orf72-206ENST00000619707 ZCCHC11Q5TAX3 1644 aaKnown RBP10.75□□□□□ -0.69
C9orf72-206ENST00000619707 EFCAB6Q5THR3 1501 aa10.75□□□□□ -0.69
C9orf72-206ENST00000619707 CDC45O75419 566 aa10.75□□□□□ -0.69
C9orf72-206ENST00000619707 ZNF445P59923 1031 aa10.75□□□□□ -0.69
C9orf72-206ENST00000619707 MCTP1Q6DN14 999 aa10.75□□□□□ -0.69
C9orf72-206ENST00000619707 NUCB2P80303 420 aa10.74□□□□□ -0.69
C9orf72-206ENST00000619707 HS1BP3Q53T59 392 aa10.74□□□□□ -0.69
C9orf72-206ENST00000619707 CAVIN1Q6NZI2 390 aaKnown RBP10.74□□□□□ -0.69
C9orf72-206ENST00000619707 PPIP5K1Q6PFW1 1433 aa10.74□□□□□ -0.69
C9orf72-206ENST00000619707 PUS7Q96PZ0 661 aaKnown RBP10.74□□□□□ -0.69
C9orf72-206ENST00000619707 C1orf115Q9H7X2 142 aa10.74□□□□□ -0.69
C9orf72-206ENST00000619707 ADGRB3O60242 1522 aa10.74□□□□□ -0.69
C9orf72-206ENST00000619707 ARAP3Q8WWN8 1544 aa10.73□□□□□ -0.69
C9orf72-206ENST00000619707 RABEP1Q15276 862 aa10.73□□□□□ -0.69
C9orf72-206ENST00000619707 ZSCAN23Q3MJ62 389 aa10.73□□□□□ -0.69
C9orf72-206ENST00000619707 R3HCC1Q9Y3T6 440 aaKnown RBP10.73□□□□□ -0.69
C9orf72-206ENST00000619707 MED14O60244 1454 aa10.73□□□□□ -0.69
C9orf72-206ENST00000619707 MROH1Q8NDA8 1641 aa10.73□□□□□ -0.69
C9orf72-206ENST00000619707 ADGRB1O14514 1584 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms