RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 GNL2Q13823 731 aaKnown RBP13.26□□□□□ -0.29
HNF4A-209ENST00000619550 MVPQ14764 893 aaKnown RBP13.26□□□□□ -0.29
HNF4A-209ENST00000619550 GGNBP2Q9H3C7 697 aa13.26□□□□□ -0.29
HNF4A-209ENST00000619550 G3V3G9 751 aa13.26□□□□□ -0.29
HNF4A-209ENST00000619550 CT47B1P0C2W7 299 aaPredicted RBP13.26□□□□□ -0.29
HNF4A-209ENST00000619550 LRRFIP1Q32MZ4 808 aaKnown RBP13.26□□□□□ -0.29
HNF4A-209ENST00000619550 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
HNF4A-209ENST00000619550 NBPF1Q3BBV0 1214 aa13.26□□□□□ -0.29
HNF4A-209ENST00000619550 SMAP1Q8IYB5 467 aaPredicted RBP13.26□□□□□ -0.29
HNF4A-209ENST00000619550 ANO2Q9NQ90 1003 aa13.26□□□□□ -0.29
HNF4A-209ENST00000619550 WDR63Q8IWG1 891 aa13.25□□□□□ -0.29
HNF4A-209ENST00000619550 MEX3CQ5U5Q3 659 aaKnown RBP13.25□□□□□ -0.29
HNF4A-209ENST00000619550 HSP90B1P14625 803 aaKnown RBP13.25□□□□□ -0.29
HNF4A-209ENST00000619550 ATAD2Q6PL18 1390 aa13.25□□□□□ -0.29
HNF4A-209ENST00000619550 CALCOCO1Q9P1Z2 691 aa13.25□□□□□ -0.29
HNF4A-209ENST00000619550 ABTB2Q8N961 1025 aa13.24□□□□□ -0.29
HNF4A-209ENST00000619550 GTPBP4Q9BZE4 634 aaKnown RBP13.24□□□□□ -0.29
HNF4A-209ENST00000619550 NLRP2Q9NX02 1062 aa13.24□□□□□ -0.29
HNF4A-209ENST00000619550 XRCC6P12956 609 aaKnown RBP eCLIP13.24□□□□□ -0.292e-10■■■■□ 23.7
HNF4A-209ENST00000619550 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
HNF4A-209ENST00000619550 CHMP4CQ96CF2 233 aa13.24□□□□□ -0.29
HNF4A-209ENST00000619550 SMC3Q9UQE7 1217 aa13.24□□□□□ -0.29
HNF4A-209ENST00000619550 ERBINQ96RT1 1412 aa13.24□□□□□ -0.29
HNF4A-209ENST00000619550 ESCO1Q5FWF5 840 aa13.23□□□□□ -0.29
HNF4A-209ENST00000619550 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
HNF4A-209ENST00000619550 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
HNF4A-209ENST00000619550 CAMSAP2Q08AD1 1489 aa13.22□□□□□ -0.29
HNF4A-209ENST00000619550 H3BQV1 296 aa13.22□□□□□ -0.29
HNF4A-209ENST00000619550 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
HNF4A-209ENST00000619550 EXOSC9Q06265 439 aaKnown RBP13.22□□□□□ -0.29
HNF4A-209ENST00000619550 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
HNF4A-209ENST00000619550 C9orf78Q9NZ63 289 aaPredicted RBP13.22□□□□□ -0.29
HNF4A-209ENST00000619550 MTHFSP49914 203 aa13.22□□□□□ -0.29
HNF4A-209ENST00000619550 SF3A1Q15459 793 aaKnown RBP13.21□□□□□ -0.29
HNF4A-209ENST00000619550 CCDC34Q96HJ3 373 aa13.21□□□□□ -0.29
HNF4A-209ENST00000619550 ACBD3Q9H3P7 528 aa13.21□□□□□ -0.29
HNF4A-209ENST00000619550 LRPPRCP42704 1394 aaKnown RBP13.21□□□□□ -0.29
HNF4A-209ENST00000619550 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.29
HNF4A-209ENST00000619550 DUSP27Q5VZP5 1158 aa13.21□□□□□ -0.29
HNF4A-209ENST00000619550 TBC1D32Q96NH3 1257 aa13.21□□□□□ -0.29
HNF4A-209ENST00000619550 KIF21AQ7Z4S6 1674 aa13.21□□□□□ -0.3
HNF4A-209ENST00000619550 RTEL1-TNFRSF6BF6WH68 1400 aa13.21□□□□□ -0.3
HNF4A-209ENST00000619550 ZKSCAN1P17029 563 aaPredicted RBP13.21□□□□□ -0.3
HNF4A-209ENST00000619550 NEK4P51957 841 aa13.21□□□□□ -0.3
HNF4A-209ENST00000619550 TSPYL4Q9UJ04 414 aa13.21□□□□□ -0.3
HNF4A-209ENST00000619550 ADAMTS12P58397 1594 aa13.2□□□□□ -0.3
HNF4A-209ENST00000619550 RPRD2Q5VT52 1461 aaKnown RBP13.2□□□□□ -0.3
HNF4A-209ENST00000619550 PLEKHO1Q53GL0 409 aaPredicted RBP13.2□□□□□ -0.3
HNF4A-209ENST00000619550 ATF7IPQ6VMQ6 1270 aa13.2□□□□□ -0.3
HNF4A-209ENST00000619550 NKTRP30414 1462 aaKnown RBP13.2□□□□□ -0.3
HNF4A-209ENST00000619550 C8orf34Q49A92 452 aa13.2□□□□□ -0.3
HNF4A-209ENST00000619550 CHD1LQ86WJ1 897 aa13.2□□□□□ -0.3
HNF4A-209ENST00000619550 FAM184AQ8NB25 1140 aa13.2□□□□□ -0.3
HNF4A-209ENST00000619550 CDK19Q9BWU1 502 aa13.2□□□□□ -0.3
HNF4A-209ENST00000619550 EIF2S2P20042 333 aaKnown RBP13.2□□□□□ -0.3
HNF4A-209ENST00000619550 BICD2Q8TD16 824 aa13.2□□□□□ -0.3
HNF4A-209ENST00000619550 VPS37CA5D8V6 355 aaPredicted RBP13.19□□□□□ -0.3
HNF4A-209ENST00000619550 TNPO1Q92973 898 aaKnown RBP13.19□□□□□ -0.3
HNF4A-209ENST00000619550 ABCC5O15440 1437 aa13.19□□□□□ -0.3
HNF4A-209ENST00000619550 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
HNF4A-209ENST00000619550 ZHX1Q9UKY1 873 aaPredicted RBP13.19□□□□□ -0.3
HNF4A-209ENST00000619550 PTPN23Q9H3S7 1636 aa13.19□□□□□ -0.3
HNF4A-209ENST00000619550 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
HNF4A-209ENST00000619550 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
HNF4A-209ENST00000619550 NOB1Q9ULX3 412 aaKnown RBP13.19□□□□□ -0.3
HNF4A-209ENST00000619550 WWC1Q8IX03 1113 aa13.18□□□□□ -0.3
HNF4A-209ENST00000619550 AK7Q96M32 723 aa13.18□□□□□ -0.3
HNF4A-209ENST00000619550 DNAJC2Q99543 621 aaKnown RBP13.18□□□□□ -0.3
HNF4A-209ENST00000619550 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
HNF4A-209ENST00000619550 TERF1P54274 439 aa13.18□□□□□ -0.3
HNF4A-209ENST00000619550 TPD52L1Q16890 204 aaPredicted RBP13.18□□□□□ -0.3
HNF4A-209ENST00000619550 FANCAO15360 1455 aa13.18□□□□□ -0.3
HNF4A-209ENST00000619550 FKBP5Q13451 457 aaPredicted RBP13.18□□□□□ -0.3
HNF4A-209ENST00000619550 SLC26A8Q96RN1 970 aa13.18□□□□□ -0.3
HNF4A-209ENST00000619550 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
HNF4A-209ENST00000619550 SYTL4Q96C24 671 aaPredicted RBP13.17□□□□□ -0.3
HNF4A-209ENST00000619550 PRIMPOLQ96LW4 560 aa13.17□□□□□ -0.3
HNF4A-209ENST00000619550 DCAF8L1A6NGE4 600 aa13.17□□□□□ -0.3
HNF4A-209ENST00000619550 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
HNF4A-209ENST00000619550 RNF20Q5VTR2 975 aa13.17□□□□□ -0.3
HNF4A-209ENST00000619550 USP8P40818 1118 aa13.17□□□□□ -0.3
HNF4A-209ENST00000619550 CCAR2Q8N163 923 aaKnown RBP13.17□□□□□ -0.3
HNF4A-209ENST00000619550 PHF23Q9BUL5 403 aaPredicted RBP13.17□□□□□ -0.3
HNF4A-209ENST00000619550 PRDM10Q9NQV6 1147 aa13.17□□□□□ -0.3
HNF4A-209ENST00000619550 KIF20AO95235 890 aa13.16□□□□□ -0.3
HNF4A-209ENST00000619550 HMOX1P09601 288 aa13.16□□□□□ -0.3
HNF4A-209ENST00000619550 TRIM5Q9C035 493 aa13.16□□□□□ -0.3
HNF4A-209ENST00000619550 RNF123Q5XPI4 1314 aa13.16□□□□□ -0.3
HNF4A-209ENST00000619550 MNS1Q8NEH6 495 aa13.16□□□□□ -0.3
HNF4A-209ENST00000619550 SLC12A5Q9H2X9 1139 aa13.16□□□□□ -0.3
HNF4A-209ENST00000619550 XPCQ01831 940 aaPredicted RBP13.16□□□□□ -0.3
HNF4A-209ENST00000619550 LEKR1Q6ZMV7 388 aa13.16□□□□□ -0.3
HNF4A-209ENST00000619550 DEF6Q9H4E7 631 aa13.16□□□□□ -0.3
HNF4A-209ENST00000619550 CABP1Q9NZU7 370 aa13.16□□□□□ -0.3
HNF4A-209ENST00000619550 PANK2Q9BZ23 570 aa13.16□□□□□ -0.3
HNF4A-209ENST00000619550 RARSP54136 660 aaKnown RBP13.15□□□□□ -0.3
HNF4A-209ENST00000619550 WDR33Q9C0J8 1336 aaKnown RBP13.15□□□□□ -0.3
HNF4A-209ENST00000619550 DHX29Q7Z478 1369 aaKnown RBP13.15□□□□□ -0.3
HNF4A-209ENST00000619550 TEX14Q8IWB6 1497 aa13.15□□□□□ -0.3
HNF4A-209ENST00000619550 CGNQ9P2M7 1197 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms