RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 NKX1-1Q15270 411 aaPredicted RBP8.56□□□□□ -1.04
CBWD3-215ENST00000619322 NHSQ6T4R5 1651 aa8.56□□□□□ -1.04
CBWD3-215ENST00000619322 CHGAP10645 457 aaKnown RBP8.55□□□□□ -1.04
CBWD3-215ENST00000619322 WASHC2CQ9Y4E1 1318 aa8.55□□□□□ -1.04
CBWD3-215ENST00000619322 C1orf167Q5SNV9 1468 aa8.55□□□□□ -1.04
CBWD3-215ENST00000619322 UBTFP17480 764 aaKnown RBP8.54□□□□□ -1.04
CBWD3-215ENST00000619322 P3H3Q8IVL6 736 aa8.54□□□□□ -1.04
CBWD3-215ENST00000619322 SP7Q8TDD2 431 aaPredicted RBP8.54□□□□□ -1.04
CBWD3-215ENST00000619322 RALGAPBQ86X10 1494 aa8.54□□□□□ -1.04
CBWD3-215ENST00000619322 MSH6P52701 1360 aa8.54□□□□□ -1.04
CBWD3-215ENST00000619322 PIK3C2AO00443 1686 aa8.54□□□□□ -1.04
CBWD3-215ENST00000619322 PAK3O75914 559 aaPredicted RBP8.54□□□□□ -1.04
CBWD3-215ENST00000619322 RGPD8O14715 1765 aaPredicted RBP8.53□□□□□ -1.04
CBWD3-215ENST00000619322 RIOK3O14730 519 aaKnown RBP8.53□□□□□ -1.04
CBWD3-215ENST00000619322 BCL11BQ9C0K0 894 aaPredicted RBP8.53□□□□□ -1.04
CBWD3-215ENST00000619322 ESF1Q9H501 851 aaKnown RBP8.52□□□□□ -1.04
CBWD3-215ENST00000619322 BMP2KQ9NSY1 1161 aaPredicted RBP8.52□□□□□ -1.04
CBWD3-215ENST00000619322 ZNF335Q9H4Z2 1342 aaPredicted RBP8.52□□□□□ -1.04
CBWD3-215ENST00000619322 SBNO2Q9Y2G9 1366 aa8.52□□□□□ -1.05
CBWD3-215ENST00000619322 NCKAP5LQ9HCH0 1330 aa8.52□□□□□ -1.05
CBWD3-215ENST00000619322 STK25O00506 426 aa8.51□□□□□ -1.05
CBWD3-215ENST00000619322 ZNF644Q9H582 1327 aaPredicted RBP8.51□□□□□ -1.05
CBWD3-215ENST00000619322 PNPLA6Q8IY17 1366 aa8.51□□□□□ -1.05
CBWD3-215ENST00000619322 SOS2Q07890 1332 aaPredicted RBP8.51□□□□□ -1.05
CBWD3-215ENST00000619322 SHANK3Q9BYB0 1731 aa8.51□□□□□ -1.05
CBWD3-215ENST00000619322 LRRC37A3O60309 1634 aa8.51□□□□□ -1.05
CBWD3-215ENST00000619322 NUP155O75694 1391 aa8.51□□□□□ -1.05
CBWD3-215ENST00000619322 ATN1P54259 1190 aaPredicted RBP8.51□□□□□ -1.05
CBWD3-215ENST00000619322 LY75O60449 1722 aa8.5□□□□□ -1.05
CBWD3-215ENST00000619322 MYOM1P52179 1685 aa8.5□□□□□ -1.05
CBWD3-215ENST00000619322 AATKQ6ZMQ8 1374 aa8.5□□□□□ -1.05
CBWD3-215ENST00000619322 PARD3Q8TEW0 1356 aa8.5□□□□□ -1.05
CBWD3-215ENST00000619322 TTLL13PA6NNM8 815 aa8.5□□□□□ -1.05
CBWD3-215ENST00000619322 TMEM94Q12767 1356 aa8.49□□□□□ -1.05
CBWD3-215ENST00000619322 PKD1L3Q7Z443 1732 aa8.49□□□□□ -1.05
CBWD3-215ENST00000619322 KIF3BO15066 747 aa8.49□□□□□ -1.05
CBWD3-215ENST00000619322 CHRM1P11229 460 aaPredicted RBP8.49□□□□□ -1.05
CBWD3-215ENST00000619322 EID1Q9Y6B2 187 aa8.49□□□□□ -1.05
CBWD3-215ENST00000619322 CFAP65Q6ZU64 1925 aaKnown RBP8.49□□□□□ -1.05
CBWD3-215ENST00000619322 BCL9LQ86UU0 1499 aa8.48□□□□□ -1.05
CBWD3-215ENST00000619322 PSEN1P49768 467 aa8.48□□□□□ -1.05
CBWD3-215ENST00000619322 CABP2Q9NPB3 220 aa8.48□□□□□ -1.05
CBWD3-215ENST00000619322 TMEM106CQ9BVX2 250 aa8.47□□□□□ -1.05
CBWD3-215ENST00000619322 STK24Q9Y6E0 443 aa8.47□□□□□ -1.05
CBWD3-215ENST00000619322 KIF13BQ9NQT8 1826 aa8.47□□□□□ -1.05
CBWD3-215ENST00000619322 ADAMTS7Q9UKP4 1686 aa8.47□□□□□ -1.05
CBWD3-215ENST00000619322 LTKP29376 864 aa8.46□□□□□ -1.06
CBWD3-215ENST00000619322 CCDC125Q86Z20 511 aa8.46□□□□□ -1.06
CBWD3-215ENST00000619322 POLR3AO14802 1390 aaPredicted RBP8.46□□□□□ -1.06
CBWD3-215ENST00000619322 GPRASP1Q5JY77 1395 aa8.46□□□□□ -1.06
CBWD3-215ENST00000619322 C11orf95C9JLR9 678 aaPredicted RBP8.46□□□□□ -1.06
CBWD3-215ENST00000619322 TRIM35Q9UPQ4 493 aa8.46□□□□□ -1.06
CBWD3-215ENST00000619322 KIF20BQ96Q89 1820 aa8.45□□□□□ -1.06
CBWD3-215ENST00000619322 EFCAB3Q8N7B9 438 aa8.45□□□□□ -1.06
CBWD3-215ENST00000619322 PUS7Q96PZ0 661 aaKnown RBP8.45□□□□□ -1.06
CBWD3-215ENST00000619322 POTEFA5A3E0 1075 aa8.44□□□□□ -1.06
CBWD3-215ENST00000619322 TNS3Q68CZ2 1445 aa8.44□□□□□ -1.06
CBWD3-215ENST00000619322 SSH2Q76I76 1423 aa8.44□□□□□ -1.06
CBWD3-215ENST00000619322 CEBPAP49715 358 aaPredicted RBP8.44□□□□□ -1.06
CBWD3-215ENST00000619322 HSPA2P54652 639 aa8.44□□□□□ -1.06
CBWD3-215ENST00000619322 KANK4Q5T7N3 995 aaPredicted RBP8.44□□□□□ -1.06
CBWD3-215ENST00000619322 NCAPD2Q15021 1401 aa8.44□□□□□ -1.06
CBWD3-215ENST00000619322 DPY19L2Q6NUT2 758 aa8.44□□□□□ -1.06
CBWD3-215ENST00000619322 COLQQ9Y215 455 aaPredicted RBP8.44□□□□□ -1.06
CBWD3-215ENST00000619322 CADPS2Q86UW7 1296 aa8.43□□□□□ -1.06
CBWD3-215ENST00000619322 CPDO75976 1380 aa8.43□□□□□ -1.06
CBWD3-215ENST00000619322 ONECUT3O60422 494 aaPredicted RBP8.43□□□□□ -1.06
CBWD3-215ENST00000619322 ATMINO43313 823 aaPredicted RBP8.42□□□□□ -1.06
CBWD3-215ENST00000619322 RGS12O14924 1447 aa8.42□□□□□ -1.06
CBWD3-215ENST00000619322 IDI1Q13907 227 aa8.42□□□□□ -1.06
CBWD3-215ENST00000619322 POTEB2H3BUK9 544 aa8.41□□□□□ -1.06
CBWD3-215ENST00000619322 C19orf44Q9H6X5 657 aa8.41□□□□□ -1.06
CBWD3-215ENST00000619322 YTHDC2Q9H6S0 1430 aaKnown RBP8.41□□□□□ -1.06
CBWD3-215ENST00000619322 NFAT5O94916 1531 aa8.41□□□□□ -1.06
CBWD3-215ENST00000619322 PPP1R37O75864 691 aa8.41□□□□□ -1.06
CBWD3-215ENST00000619322 PDAP1Q13442 181 aaKnown RBP8.41□□□□□ -1.06
CBWD3-215ENST00000619322 ZNF467Q7Z7K2 595 aaPredicted RBP8.41□□□□□ -1.06
CBWD3-215ENST00000619322 PPARGC1BQ86YN6 1023 aaKnown RBP8.41□□□□□ -1.06
CBWD3-215ENST00000619322 MFRPQ9BY79 579 aa8.41□□□□□ -1.06
CBWD3-215ENST00000619322 ARHGEF10O15013 1369 aa8.41□□□□□ -1.06
CBWD3-215ENST00000619322 FNBP4Q8N3X1 1017 aaPredicted RBP8.41□□□□□ -1.06
CBWD3-215ENST00000619322 ZNF772Q68DY9 489 aaPredicted RBP8.4□□□□□ -1.06
CBWD3-215ENST00000619322 MS4A4AQ96JQ5 239 aa8.4□□□□□ -1.06
CBWD3-215ENST00000619322 PHF8Q9UPP1 1060 aa8.4□□□□□ -1.06
CBWD3-215ENST00000619322 VGFO15240 615 aaPredicted RBP8.4□□□□□ -1.07
CBWD3-215ENST00000619322 DHX57Q6P158 1386 aaKnown RBP8.39□□□□□ -1.07
CBWD3-215ENST00000619322 RGS17Q9UGC6 210 aaPredicted RBP8.39□□□□□ -1.07
CBWD3-215ENST00000619322 FBXO31Q5XUX0 539 aaPredicted RBP8.39□□□□□ -1.07
CBWD3-215ENST00000619322 HS6ST3Q8IZP7 471 aa8.39□□□□□ -1.07
CBWD3-215ENST00000619322 C5P01031 1676 aa8.39□□□□□ -1.07
CBWD3-215ENST00000619322 ASTLQ6HA08 431 aaPredicted RBP8.38□□□□□ -1.07
CBWD3-215ENST00000619322 NINLQ9Y2I6 1382 aa8.38□□□□□ -1.07
CBWD3-215ENST00000619322 LTN1O94822 1766 aa8.38□□□□□ -1.07
CBWD3-215ENST00000619322 ARFGEF2Q9Y6D5 1785 aa8.38□□□□□ -1.07
CBWD3-215ENST00000619322 POTEJP0CG39 1038 aa8.37□□□□□ -1.07
CBWD3-215ENST00000619322 METP08581 1390 aa8.37□□□□□ -1.07
CBWD3-215ENST00000619322 MAP3K5Q99683 1374 aa8.37□□□□□ -1.07
CBWD3-215ENST00000619322 ATAD2Q6PL18 1390 aa8.36□□□□□ -1.07
CBWD3-215ENST00000619322 HSPA1LP34931 641 aa8.36□□□□□ -1.07
CBWD3-215ENST00000619322 BLMP54132 1417 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms