RNA–Protein interactions for RNA: ENST00000618698.4

CPEB1-217, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 2

Gene CPEB1, Length 2,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-217ENST00000618698 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
CPEB1-217ENST00000618698 PLEKHG3A1L390 1219 aa12.68□□□□□ -0.38
CPEB1-217ENST00000618698 PPIP5K1Q6PFW1 1433 aa12.68□□□□□ -0.38
CPEB1-217ENST00000618698 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
CPEB1-217ENST00000618698 BRPF3Q9ULD4 1205 aa12.67□□□□□ -0.38
CPEB1-217ENST00000618698 POLR3AO14802 1390 aaPredicted RBP12.67□□□□□ -0.38
CPEB1-217ENST00000618698 ANKRD36BQ8N2N9 1353 aa12.67□□□□□ -0.38
CPEB1-217ENST00000618698 SENP3-EIF4A1A0A087X0R7 540 aa12.66□□□□□ -0.38
CPEB1-217ENST00000618698 C14orf37Q86TY3 774 aa12.65□□□□□ -0.38
CPEB1-217ENST00000618698 SLC12A5Q9H2X9 1139 aa12.65□□□□□ -0.38
CPEB1-217ENST00000618698 PER1O15534 1290 aaPredicted RBP12.65□□□□□ -0.38
CPEB1-217ENST00000618698 A0A1W2PP64 1363 aa12.65□□□□□ -0.39
CPEB1-217ENST00000618698 ATF3P18847 181 aa12.64□□□□□ -0.39
CPEB1-217ENST00000618698 PRKRIP1Q9H875 184 aaPredicted RBP12.64□□□□□ -0.39
CPEB1-217ENST00000618698 CABP1Q9NZU7 370 aa12.64□□□□□ -0.39
CPEB1-217ENST00000618698 SSH2Q76I76 1423 aa12.64□□□□□ -0.39
CPEB1-217ENST00000618698 TRPM3Q9HCF6 1732 aaPredicted RBP12.63□□□□□ -0.39
CPEB1-217ENST00000618698 USP54Q70EL1 1684 aa12.63□□□□□ -0.39
CPEB1-217ENST00000618698 NHSL1Q5SYE7 1610 aa12.63□□□□□ -0.39
CPEB1-217ENST00000618698 ANKRD26Q9UPS8 1709 aa12.63□□□□□ -0.39
CPEB1-217ENST00000618698 KIF20BQ96Q89 1820 aa12.62□□□□□ -0.39
CPEB1-217ENST00000618698 PANK3Q9H999 370 aa12.62□□□□□ -0.39
CPEB1-217ENST00000618698 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
CPEB1-217ENST00000618698 CNGB1Q14028 1251 aaPredicted RBP12.62□□□□□ -0.39
CPEB1-217ENST00000618698 CARD14Q9BXL6 1004 aa12.62□□□□□ -0.39
CPEB1-217ENST00000618698 NPC1L1Q9UHC9 1359 aa12.62□□□□□ -0.39
CPEB1-217ENST00000618698 USP6P35125 1406 aa12.61□□□□□ -0.39
CPEB1-217ENST00000618698 POLR3GLQ9BT43 218 aa12.61□□□□□ -0.39
CPEB1-217ENST00000618698 EDC4Q6P2E9 1401 aaKnown RBP12.61□□□□□ -0.39
CPEB1-217ENST00000618698 TERF2IPQ9NYB0 399 aa12.61□□□□□ -0.39
CPEB1-217ENST00000618698 ACEP12821 1306 aa12.61□□□□□ -0.39
CPEB1-217ENST00000618698 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
CPEB1-217ENST00000618698 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
CPEB1-217ENST00000618698 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
CPEB1-217ENST00000618698 PHF8Q9UPP1 1060 aa12.6□□□□□ -0.39
CPEB1-217ENST00000618698 SLAIN2Q9P270 581 aa12.6□□□□□ -0.39
CPEB1-217ENST00000618698 USP35Q9P2H5 1018 aa12.6□□□□□ -0.39
CPEB1-217ENST00000618698 ROBO1Q9Y6N7 1651 aa12.6□□□□□ -0.39
CPEB1-217ENST00000618698 ORAI2Q96SN7 254 aa12.59□□□□□ -0.39
CPEB1-217ENST00000618698 NSD3Q9BZ95 1437 aa12.59□□□□□ -0.39
CPEB1-217ENST00000618698 ALS2Q96Q42 1657 aa12.59□□□□□ -0.39
CPEB1-217ENST00000618698 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
CPEB1-217ENST00000618698 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
CPEB1-217ENST00000618698 AHDC1Q5TGY3 1603 aaPredicted RBP12.59□□□□□ -0.39
CPEB1-217ENST00000618698 SMG6Q86US8 1419 aaKnown RBP12.59□□□□□ -0.39
CPEB1-217ENST00000618698 HDGFL2Q7Z4V5 671 aaPredicted RBP12.59□□□□□ -0.39
CPEB1-217ENST00000618698 PXDNQ92626 1479 aa12.59□□□□□ -0.39
CPEB1-217ENST00000618698 KTN1Q86UP2 1357 aaKnown RBP12.58□□□□□ -0.4
CPEB1-217ENST00000618698 BRINP3Q76B58 766 aa12.58□□□□□ -0.4
CPEB1-217ENST00000618698 PIK3C2AO00443 1686 aa12.58□□□□□ -0.4
CPEB1-217ENST00000618698 ESCO1Q5FWF5 840 aa12.58□□□□□ -0.4
CPEB1-217ENST00000618698 AMER1Q5JTC6 1135 aaPredicted RBP12.58□□□□□ -0.4
CPEB1-217ENST00000618698 NUDCQ9Y266 331 aa12.58□□□□□ -0.4
CPEB1-217ENST00000618698 PMFBP1Q8TBY8 1022 aa12.57□□□□□ -0.4
CPEB1-217ENST00000618698 NSD2O96028 1365 aa12.57□□□□□ -0.4
CPEB1-217ENST00000618698 PPM1GO15355 546 aaPredicted RBP12.56□□□□□ -0.4
CPEB1-217ENST00000618698 TTC21AQ8NDW8 1320 aa12.55□□□□□ -0.4
CPEB1-217ENST00000618698 SBNO1A3KN83 1393 aa12.55□□□□□ -0.4
CPEB1-217ENST00000618698 RNF123Q5XPI4 1314 aa12.55□□□□□ -0.4
CPEB1-217ENST00000618698 TTC21BQ7Z4L5 1316 aa12.55□□□□□ -0.4
CPEB1-217ENST00000618698 PDE4AP27815 886 aa12.55□□□□□ -0.4
CPEB1-217ENST00000618698 GSE1Q14687 1217 aa12.55□□□□□ -0.4
CPEB1-217ENST00000618698 NGDNQ8NEJ9 315 aaKnown RBP12.55□□□□□ -0.4
CPEB1-217ENST00000618698 CRYBG1Q9Y4K1 1723 aa12.54□□□□□ -0.4
CPEB1-217ENST00000618698 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
CPEB1-217ENST00000618698 NPHP3Q7Z494 1330 aa12.54□□□□□ -0.4
CPEB1-217ENST00000618698 KNSTRNQ9Y448 316 aa12.54□□□□□ -0.4
CPEB1-217ENST00000618698 SOS2Q07890 1332 aaPredicted RBP12.54□□□□□ -0.4
CPEB1-217ENST00000618698 CGNL1Q0VF96 1302 aa12.54□□□□□ -0.4
CPEB1-217ENST00000618698 TOM1O60784 492 aa12.54□□□□□ -0.4
CPEB1-217ENST00000618698 OVOS2A0A0J9YW53 1432 aa12.53□□□□□ -0.4
CPEB1-217ENST00000618698 OVOS2Q6IE36 1432 aa12.53□□□□□ -0.4
CPEB1-217ENST00000618698 PARD3Q8TEW0 1356 aa12.53□□□□□ -0.4
CPEB1-217ENST00000618698 MED1Q15648 1581 aaPredicted RBP12.53□□□□□ -0.4
CPEB1-217ENST00000618698 FYB1O15117 783 aa12.52□□□□□ -0.4
CPEB1-217ENST00000618698 FOXO3O43524 673 aa12.52□□□□□ -0.4
CPEB1-217ENST00000618698 COL16A1Q07092 1604 aaPredicted RBP12.52□□□□□ -0.4
CPEB1-217ENST00000618698 FRAT1Q92837 279 aaPredicted RBP12.52□□□□□ -0.41
CPEB1-217ENST00000618698 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
CPEB1-217ENST00000618698 KRT28Q7Z3Y7 464 aa12.51□□□□□ -0.41
CPEB1-217ENST00000618698 TNS3Q68CZ2 1445 aa12.5□□□□□ -0.41
CPEB1-217ENST00000618698 SLIT3O75094 1523 aa12.5□□□□□ -0.41
CPEB1-217ENST00000618698 PSME1Q06323 249 aa12.5□□□□□ -0.41
CPEB1-217ENST00000618698 BACH2Q9BYV9 841 aa12.5□□□□□ -0.41
CPEB1-217ENST00000618698 COL22A1Q8NFW1 1626 aaPredicted RBP12.5□□□□□ -0.41
CPEB1-217ENST00000618698 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
CPEB1-217ENST00000618698 ABCA3Q99758 1704 aa12.5□□□□□ -0.41
CPEB1-217ENST00000618698 EXOC6Q8TAG9 804 aa12.49□□□□□ -0.41
CPEB1-217ENST00000618698 UBAP1LF5GYI3 381 aa12.49□□□□□ -0.41
CPEB1-217ENST00000618698 NFKBIBQ15653 356 aa12.49□□□□□ -0.41
CPEB1-217ENST00000618698 PHRF1Q9P1Y6 1649 aaKnown RBP12.49□□□□□ -0.41
CPEB1-217ENST00000618698 SPATA31A3Q5VYP0 1347 aa12.49□□□□□ -0.41
CPEB1-217ENST00000618698 SLC4A3P48751 1232 aa12.48□□□□□ -0.41
CPEB1-217ENST00000618698 RALBP1Q15311 655 aa12.48□□□□□ -0.41
CPEB1-217ENST00000618698 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
CPEB1-217ENST00000618698 NME9Q86XW9 330 aa12.48□□□□□ -0.41
CPEB1-217ENST00000618698 DDX17Q92841 729 aaKnown RBP12.48□□□□□ -0.41
CPEB1-217ENST00000618698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPEB1-217ENST00000618698 PKNOX2Q96KN3 472 aa12.48□□□□□ -0.41
CPEB1-217ENST00000618698 USP19O94966 1318 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms