RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 NUTM2GQ5VZR2 741 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 SRCIN1Q9C0H9 1055 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 IFT57Q9NWB7 429 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 CHMP3Q9Y3E7 222 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 CASKIN1Q8WXD9 1431 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 MARCH6O60337 910 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 KCTD17Q8N5Z5 321 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 RNF214Q8ND24 703 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 ZNF771Q7L3S4 317 aaPredicted RBP3.67□□□□□ -1.82
LPP-221ENST00000618621 ANKRD20A12PQ8NF67 263 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 TRIM29Q14134 588 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 SAFBQ15424 915 aaKnown RBP eCLIP3.67□□□□□ -1.82
LPP-221ENST00000618621 TXNDC2Q86VQ3 553 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 TAF3Q5VWG9 929 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 WWC1Q8IX03 1113 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 CNTROBQ8N137 903 aa3.67□□□□□ -1.82
LPP-221ENST00000618621 CWC15Q9P013 229 aaKnown RBP3.67□□□□□ -1.82
LPP-221ENST00000618621 C1orf141Q5JVX7 400 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 TTC16Q8NEE8 873 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 MCM5P33992 734 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 ACBD3Q9H3P7 528 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 CABP2Q9NPB3 220 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 PRXQ9BXM0 1461 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 PSME1Q06323 249 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 ZNF396Q96N95 335 aaPredicted RBP3.66□□□□□ -1.82
LPP-221ENST00000618621 GGNBP2Q9H3C7 697 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 CCDC192P0DO97 292 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 MATR3P43243 847 aaKnown RBP eCLIP3.66□□□□□ -1.821e-6■■■□□ 18.5
LPP-221ENST00000618621 ERCC4Q92889 916 aaPredicted RBP3.66□□□□□ -1.82
LPP-221ENST00000618621 MTMR7Q9Y216 660 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 ZNF330Q9Y3S2 320 aaPredicted RBP3.66□□□□□ -1.82
LPP-221ENST00000618621 RAD21O60216 631 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 NOL8Q76FK4 1167 aaKnown RBP3.66□□□□□ -1.82
LPP-221ENST00000618621 CCT4P50991 539 aaKnown RBP3.66□□□□□ -1.82
LPP-221ENST00000618621 CCDC30Q5VVM6 783 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 PDCL2Q8N4E4 241 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 NAIPQ13075 1403 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 ANKRD1Q15327 319 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 CCDC18Q5T9S5 1454 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 HFM1A2PYH4 1435 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 TRIM5Q9C035 493 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 TRDNQ13061 729 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 FOXD4L6Q3SYB3 417 aaPredicted RBP3.66□□□□□ -1.82
LPP-221ENST00000618621 FOXD4L3Q6VB84 417 aaPredicted RBP3.66□□□□□ -1.82
LPP-221ENST00000618621 SURF6O75683 361 aaKnown RBP3.66□□□□□ -1.82
LPP-221ENST00000618621 GNAI2P04899 355 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 GAS2L2Q8NHY3 880 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 NEK4P51957 841 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 EVA1CP58658 441 aa3.66□□□□□ -1.82
LPP-221ENST00000618621 ZNF692Q9BU19 519 aaPredicted RBP3.66□□□□□ -1.82
LPP-221ENST00000618621 IPO7O95373 1038 aaKnown RBP3.65□□□□□ -1.82
LPP-221ENST00000618621 OLFM4Q6UX06 510 aa3.65□□□□□ -1.82
LPP-221ENST00000618621 SLC12A5Q9H2X9 1139 aa3.65□□□□□ -1.82
LPP-221ENST00000618621 ZSCAN30Q86W11 494 aa3.65□□□□□ -1.82
LPP-221ENST00000618621 ZSCAN31Q96LW9 406 aaPredicted RBP3.65□□□□□ -1.82
LPP-221ENST00000618621 NEXNQ0ZGT2 675 aa3.65□□□□□ -1.82
LPP-221ENST00000618621 CAVIN1Q6NZI2 390 aaKnown RBP3.65□□□□□ -1.82
LPP-221ENST00000618621 CHD1LQ86WJ1 897 aa3.65□□□□□ -1.82
LPP-221ENST00000618621 ERC1Q8IUD2 1116 aa3.65□□□□□ -1.82
LPP-221ENST00000618621 CLASRPQ8N2M8 674 aaKnown RBP3.65□□□□□ -1.82
LPP-221ENST00000618621 MYOM3Q5VTT5 1437 aa3.65□□□□□ -1.82
LPP-221ENST00000618621 FBXO31Q5XUX0 539 aaPredicted RBP3.65□□□□□ -1.82
LPP-221ENST00000618621 NFXL1Q6ZNB6 911 aa3.65□□□□□ -1.82
LPP-221ENST00000618621 CCDC73Q6ZRK6 1079 aa3.65□□□□□ -1.82
LPP-221ENST00000618621 SSH1Q8WYL5 1049 aa3.65□□□□□ -1.82
LPP-221ENST00000618621 TSPYL4Q9UJ04 414 aa3.65□□□□□ -1.82
LPP-221ENST00000618621 SEC24BO95487 1268 aa3.65□□□□□ -1.82
LPP-221ENST00000618621 MPNDQ8N594 471 aa3.65□□□□□ -1.83
LPP-221ENST00000618621 RASSF8Q8NHQ8 419 aa3.65□□□□□ -1.83
LPP-221ENST00000618621 RRAGDQ9NQL2 400 aaPredicted RBP3.65□□□□□ -1.83
LPP-221ENST00000618621 BICD2Q8TD16 824 aa3.65□□□□□ -1.83
LPP-221ENST00000618621 SMARCA4P51532 1647 aa3.65□□□□□ -1.83
LPP-221ENST00000618621 EIF2S2P20042 333 aaKnown RBP3.65□□□□□ -1.83
LPP-221ENST00000618621 SDF4Q9BRK5 362 aa3.65□□□□□ -1.83
LPP-221ENST00000618621 CCDC47Q96A33 483 aaKnown RBP3.65□□□□□ -1.83
LPP-221ENST00000618621 MVPQ14764 893 aaKnown RBP3.65□□□□□ -1.83
LPP-221ENST00000618621 RAB11FIP3O75154 756 aa3.65□□□□□ -1.83
LPP-221ENST00000618621 NEUROD6Q96NK8 337 aa3.65□□□□□ -1.83
LPP-221ENST00000618621 WDR70Q9NW82 654 aa3.65□□□□□ -1.83
LPP-221ENST00000618621 GRIN2BQ13224 1484 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 BRPF1P55201 1214 aaPredicted RBP3.64□□□□□ -1.83
LPP-221ENST00000618621 PLEKHO1Q53GL0 409 aaPredicted RBP3.64□□□□□ -1.83
LPP-221ENST00000618621 GNAI3P08754 354 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 WDR33Q9C0J8 1336 aaKnown RBP3.64□□□□□ -1.83
LPP-221ENST00000618621 MNS1Q8NEH6 495 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 SECISBP2LQ93073 1101 aaKnown RBP3.64□□□□□ -1.83
LPP-221ENST00000618621 CTNNA3Q9UI47 895 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 SLC4A2P04920 1241 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 AEBP1Q8IUX7 1158 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 CFAP45Q9UL16 551 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 UBTFL1P0CB47 393 aaPredicted RBP3.64□□□□□ -1.83
LPP-221ENST00000618621 NAP1L1P55209 391 aaKnown RBP3.64□□□□□ -1.83
LPP-221ENST00000618621 OFD1O75665 1012 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 WAPLQ7Z5K2 1190 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 SEPT11Q9NVA2 429 aaKnown RBP3.64□□□□□ -1.83
LPP-221ENST00000618621 CYP46A1Q9Y6A2 500 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 HSP90B2PQ58FF3 399 aa3.64□□□□□ -1.83
LPP-221ENST00000618621 K7ELQ4 463 aaPredicted RBP3.64□□□□□ -1.83
LPP-221ENST00000618621 PER1O15534 1290 aaPredicted RBP3.64□□□□□ -1.83
LPP-221ENST00000618621 FKBP5Q13451 457 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms