RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 KLF16Q9BXK1 252 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-220ENST00000618606 TULP1O00294 542 aaPredicted RBP8.37□□□□□ -1.07
TARDBP-220ENST00000618606 DESI1Q6ICB0 168 aa8.37□□□□□ -1.07
TARDBP-220ENST00000618606 WDR4P57081 412 aaKnown RBP8.36□□□□□ -1.07
TARDBP-220ENST00000618606 PRR7Q8TB68 274 aa8.36□□□□□ -1.07
TARDBP-220ENST00000618606 SPIRE2Q8WWL2 714 aa8.36□□□□□ -1.07
TARDBP-220ENST00000618606 SPDYE5A6NIY4 337 aa8.35□□□□□ -1.07
TARDBP-220ENST00000618606 KRI1Q8N9T8 703 aaKnown RBP8.35□□□□□ -1.07
TARDBP-220ENST00000618606 SOBPA7XYQ1 873 aa8.34□□□□□ -1.07
TARDBP-220ENST00000618606 CDK15Q96Q40 435 aa8.34□□□□□ -1.07
TARDBP-220ENST00000618606 NDUFV2P19404 249 aa8.33□□□□□ -1.08
TARDBP-220ENST00000618606 SSTR3P32745 418 aaPredicted RBP8.33□□□□□ -1.08
TARDBP-220ENST00000618606 KCNMA1Q12791 1236 aa8.33□□□□□ -1.08
TARDBP-220ENST00000618606 MTMR2Q13614 643 aa8.33□□□□□ -1.08
TARDBP-220ENST00000618606 FAM174AQ8TBP5 190 aa8.33□□□□□ -1.08
TARDBP-220ENST00000618606 MOXD2PA6NHM9 499 aa8.32□□□□□ -1.08
TARDBP-220ENST00000618606 SUZ12Q15022 739 aaKnown RBP8.32□□□□□ -1.08
TARDBP-220ENST00000618606 MAN1A2O60476 641 aa8.3□□□□□ -1.08
TARDBP-220ENST00000618606 GSK3AP49840 483 aa8.3□□□□□ -1.08
TARDBP-220ENST00000618606 LYPD8Q6UX82 237 aa8.3□□□□□ -1.08
TARDBP-220ENST00000618606 PPFIA3O75145 1194 aa8.29□□□□□ -1.08
TARDBP-220ENST00000618606 ZIC2O95409 532 aaPredicted RBP8.29□□□□□ -1.08
TARDBP-220ENST00000618606 NR5A1Q13285 461 aa8.29□□□□□ -1.08
TARDBP-220ENST00000618606 GJA5P36382 358 aa8.28□□□□□ -1.08
TARDBP-220ENST00000618606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.28□□□□□ -1.08
TARDBP-220ENST00000618606 ITPKCQ96DU7 683 aa8.28□□□□□ -1.08
TARDBP-220ENST00000618606 ZFAND3Q9H8U3 227 aa8.28□□□□□ -1.08
TARDBP-220ENST00000618606 CTHP32929 405 aa8.27□□□□□ -1.09
TARDBP-220ENST00000618606 FOXJ1Q92949 421 aa8.27□□□□□ -1.09
TARDBP-220ENST00000618606 NR3C2P08235 984 aa8.26□□□□□ -1.09
TARDBP-220ENST00000618606 ARID5BQ14865 1188 aa8.26□□□□□ -1.09
TARDBP-220ENST00000618606 C6orf118Q5T5N4 469 aa8.26□□□□□ -1.09
TARDBP-220ENST00000618606 F12P00748 615 aaPredicted RBP8.25□□□□□ -1.09
TARDBP-220ENST00000618606 GRM5P41594 1212 aa8.25□□□□□ -1.09
TARDBP-220ENST00000618606 KCTD17Q8N5Z5 321 aa8.25□□□□□ -1.09
TARDBP-220ENST00000618606 SPTLC1O15269 473 aa8.24□□□□□ -1.09
TARDBP-220ENST00000618606 UPP2O95045 317 aa8.24□□□□□ -1.09
TARDBP-220ENST00000618606 BMP2P12643 396 aa8.24□□□□□ -1.09
TARDBP-220ENST00000618606 LINC00528Q8N1L1 170 aa8.24□□□□□ -1.09
TARDBP-220ENST00000618606 MEIOBQ8N635 442 aa8.24□□□□□ -1.09
TARDBP-220ENST00000618606 SOS2Q07890 1332 aaPredicted RBP8.24□□□□□ -1.09
TARDBP-220ENST00000618606 AMHR2Q16671 573 aa8.23□□□□□ -1.09
TARDBP-220ENST00000618606 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
TARDBP-220ENST00000618606 TMEM151AQ8N4L1 468 aa8.23□□□□□ -1.09
TARDBP-220ENST00000618606 CFAP99D6REC4 459 aa8.22□□□□□ -1.09
TARDBP-220ENST00000618606 TTLL12Q14166 644 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-220ENST00000618606 DIXDC1Q155Q3 683 aa8.22□□□□□ -1.09
TARDBP-220ENST00000618606 RSBN1LQ6PCB5 846 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-220ENST00000618606 BPHLQ86WA6 291 aaPredicted RBP8.22□□□□□ -1.09
TARDBP-220ENST00000618606 MAP10Q9P2G4 905 aa8.22□□□□□ -1.09
TARDBP-220ENST00000618606 DNMT3LQ9UJW3 386 aa8.22□□□□□ -1.09
TARDBP-220ENST00000618606 KRT76Q01546 638 aa8.21□□□□□ -1.1
TARDBP-220ENST00000618606 RASSF7Q02833 373 aa8.21□□□□□ -1.1
TARDBP-220ENST00000618606 GIGYF2Q6Y7W6 1299 aaKnown RBP8.21□□□□□ -1.1
TARDBP-220ENST00000618606 BEGAINQ9BUH8 593 aa8.21□□□□□ -1.1
TARDBP-220ENST00000618606 RNF225M0QZC1 329 aaPredicted RBP8.2□□□□□ -1.1
TARDBP-220ENST00000618606 GDF11O95390 407 aa8.2□□□□□ -1.1
TARDBP-220ENST00000618606 HRCP23327 699 aa8.2□□□□□ -1.1
TARDBP-220ENST00000618606 GPR161Q8N6U8 529 aaKnown RBP8.2□□□□□ -1.1
TARDBP-220ENST00000618606 TBC1D2Q9BYX2 928 aa8.2□□□□□ -1.1
TARDBP-220ENST00000618606 PCDHB15Q9Y5E8 787 aa8.2□□□□□ -1.1
TARDBP-220ENST00000618606 AGERQ15109 404 aa8.19□□□□□ -1.1
TARDBP-220ENST00000618606 PRPF38BQ5VTL8 546 aaKnown RBP8.19□□□□□ -1.1
TARDBP-220ENST00000618606 TSEN34Q9BSV6 310 aaKnown RBP8.19□□□□□ -1.1
TARDBP-220ENST00000618606 C1QTNF2Q9BXJ5 285 aa8.19□□□□□ -1.1
TARDBP-220ENST00000618606 ZBTB3Q9H5J0 574 aa8.19□□□□□ -1.1
TARDBP-220ENST00000618606 ADAMTS8Q9UP79 889 aa8.19□□□□□ -1.1
TARDBP-220ENST00000618606 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.18□□□□□ -1.12e-6■■■■□ 20.4
TARDBP-220ENST00000618606 CNTNAP3BQ96NU0 1288 aa8.18□□□□□ -1.1
TARDBP-220ENST00000618606 CNTNAP3Q9BZ76 1288 aa8.18□□□□□ -1.1
TARDBP-220ENST00000618606 MAP4K5Q9Y4K4 846 aa8.18□□□□□ -1.1
TARDBP-220ENST00000618606 BARGINQ6ZT62 677 aa8.17□□□□□ -1.1
TARDBP-220ENST00000618606 SH3RF1Q7Z6J0 888 aa8.17□□□□□ -1.1
TARDBP-220ENST00000618606 NANOS1Q8WY41 292 aaKnown RBP8.17□□□□□ -1.1
TARDBP-220ENST00000618606 ZMYND10O75800 440 aa8.16□□□□□ -1.1
TARDBP-220ENST00000618606 TRMT44Q8IYL2 757 aaKnown RBP8.16□□□□□ -1.1
TARDBP-220ENST00000618606 ARMC2Q8NEN0 867 aa8.16□□□□□ -1.1
TARDBP-220ENST00000618606 EMILIN1Q9Y6C2 1016 aa8.16□□□□□ -1.1
TARDBP-220ENST00000618606 PER1O15534 1290 aaPredicted RBP8.15□□□□□ -1.1
TARDBP-220ENST00000618606 FSHRP23945 695 aa8.15□□□□□ -1.1
TARDBP-220ENST00000618606 PTSQ03393 145 aa8.15□□□□□ -1.1
TARDBP-220ENST00000618606 TTLL8A6PVC2 850 aa8.14□□□□□ -1.11
TARDBP-220ENST00000618606 VASH1Q7L8A9 365 aaPredicted RBP8.14□□□□□ -1.11
TARDBP-220ENST00000618606 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
TARDBP-220ENST00000618606 ZNF385CQ66K41 422 aaPredicted RBP8.13□□□□□ -1.11
TARDBP-220ENST00000618606 RIC3Q7Z5B4 369 aa8.13□□□□□ -1.11
TARDBP-220ENST00000618606 CCDC116Q8IYX3 515 aa8.13□□□□□ -1.11
TARDBP-220ENST00000618606 ZC3H15Q8WU90 426 aaKnown RBP8.13□□□□□ -1.11
TARDBP-220ENST00000618606 NBPF14Q5TI25 921 aa8.12□□□□□ -1.11
TARDBP-220ENST00000618606 SH3BP5LQ7L8J4 393 aa8.12□□□□□ -1.11
TARDBP-220ENST00000618606 CABLES1Q8TDN4 633 aa8.12□□□□□ -1.11
TARDBP-220ENST00000618606 CCDC155Q8N6L0 562 aa8.11□□□□□ -1.11
TARDBP-220ENST00000618606 SPINT1O43278 529 aa8.1□□□□□ -1.11
TARDBP-220ENST00000618606 SLURP2P0DP57 97 aa8.1□□□□□ -1.11
TARDBP-220ENST00000618606 RNFT1Q5M7Z0 435 aa8.1□□□□□ -1.11
TARDBP-220ENST00000618606 Q6ZVU0 165 aa8.1□□□□□ -1.11
TARDBP-220ENST00000618606 PARP9Q8IXQ6 854 aa8.1□□□□□ -1.11
TARDBP-220ENST00000618606 SVOPQ8N4V2 548 aa8.1□□□□□ -1.11
TARDBP-220ENST00000618606 DNMT3AQ9Y6K1 912 aaPredicted RBP8.1□□□□□ -1.11
TARDBP-220ENST00000618606 SLC35F4A4IF30 521 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms