RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 CFAP53Q96M91 514 aa14.93□□□□□ -0.02
CPEB1-216ENST00000618449 CCDC146Q8IYE0 955 aa14.92□□□□□ -0.02
CPEB1-216ENST00000618449 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
CPEB1-216ENST00000618449 RNF123Q5XPI4 1314 aa14.91□□□□□ -0.02
CPEB1-216ENST00000618449 KDM4FA0A1W2PPD8 638 aa14.91□□□□□ -0.02
CPEB1-216ENST00000618449 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
CPEB1-216ENST00000618449 PMFBP1Q8TBY8 1022 aa14.9□□□□□ -0.02
CPEB1-216ENST00000618449 RGPD8O14715 1765 aaPredicted RBP14.9□□□□□ -0.02
CPEB1-216ENST00000618449 FBLN1P23142 703 aa14.89□□□□□ -0.03
CPEB1-216ENST00000618449 NALCNQ8IZF0 1738 aa14.89□□□□□ -0.03
CPEB1-216ENST00000618449 USP6P35125 1406 aa14.89□□□□□ -0.03
CPEB1-216ENST00000618449 PDE3BQ13370 1112 aa14.89□□□□□ -0.03
CPEB1-216ENST00000618449 NRKQ7Z2Y5 1582 aa14.88□□□□□ -0.03
CPEB1-216ENST00000618449 ANKARQ7Z5J8 1434 aa14.88□□□□□ -0.03
CPEB1-216ENST00000618449 TTC21BQ7Z4L5 1316 aa14.88□□□□□ -0.03
CPEB1-216ENST00000618449 FMN2Q9NZ56 1722 aa14.88□□□□□ -0.03
CPEB1-216ENST00000618449 CDCA7LQ96GN5 454 aa14.88□□□□□ -0.03
CPEB1-216ENST00000618449 APAF1O14727 1248 aa14.87□□□□□ -0.03
CPEB1-216ENST00000618449 COG3Q96JB2 828 aa14.87□□□□□ -0.03
CPEB1-216ENST00000618449 COL3A1P02461 1466 aaPredicted RBP14.87□□□□□ -0.03
CPEB1-216ENST00000618449 HSPA2P54652 639 aa14.87□□□□□ -0.03
CPEB1-216ENST00000618449 POLKQ9UBT6 870 aa14.87□□□□□ -0.03
CPEB1-216ENST00000618449 NWD1Q149M9 1564 aa14.86□□□□□ -0.03
CPEB1-216ENST00000618449 NGDNQ8NEJ9 315 aaKnown RBP14.86□□□□□ -0.03
CPEB1-216ENST00000618449 PNPLA6Q8IY17 1366 aa14.86□□□□□ -0.03
CPEB1-216ENST00000618449 SSH2Q76I76 1423 aa14.86□□□□□ -0.03
CPEB1-216ENST00000618449 ADGRL3Q9HAR2 1447 aa14.86□□□□□ -0.03
CPEB1-216ENST00000618449 U2AF1L5P0DN76 240 aaPredicted RBP14.85□□□□□ -0.03
CPEB1-216ENST00000618449 U2AF1Q01081 240 aaKnown RBP eCLIP14.85□□□□□ -0.03
CPEB1-216ENST00000618449 ZNF521Q96K83 1311 aa14.85□□□□□ -0.03
CPEB1-216ENST00000618449 PPM1GO15355 546 aaPredicted RBP14.84□□□□□ -0.03
CPEB1-216ENST00000618449 B4GALNT3Q6L9W6 998 aa14.84□□□□□ -0.03
CPEB1-216ENST00000618449 MAP2P11137 1827 aaKnown RBP14.84□□□□□ -0.03
CPEB1-216ENST00000618449 AATKQ6ZMQ8 1374 aa14.84□□□□□ -0.03
CPEB1-216ENST00000618449 RUNDC1Q96C34 613 aa14.84□□□□□ -0.03
CPEB1-216ENST00000618449 C14orf37Q86TY3 774 aa14.83□□□□□ -0.04
CPEB1-216ENST00000618449 EMILIN1Q9Y6C2 1016 aa14.83□□□□□ -0.04
CPEB1-216ENST00000618449 U2SURPO15042 1029 aaKnown RBP14.83□□□□□ -0.04
CPEB1-216ENST00000618449 DIAPH1O60610 1272 aaKnown RBP14.83□□□□□ -0.04
CPEB1-216ENST00000618449 OVOS2A0A0J9YW53 1432 aa14.82□□□□□ -0.04
CPEB1-216ENST00000618449 OVOS2Q6IE36 1432 aa14.82□□□□□ -0.04
CPEB1-216ENST00000618449 RBM19Q9Y4C8 960 aaKnown RBP14.82□□□□□ -0.04
CPEB1-216ENST00000618449 TTC21AQ8NDW8 1320 aa14.82□□□□□ -0.04
CPEB1-216ENST00000618449 PROSER2Q86WR7 435 aaPredicted RBP14.82□□□□□ -0.04
CPEB1-216ENST00000618449 LMTK3Q96Q04 1460 aa14.81□□□□□ -0.04
CPEB1-216ENST00000618449 RRS1Q15050 365 aaKnown RBP14.81□□□□□ -0.04
CPEB1-216ENST00000618449 GOLGA2Q08379 1002 aa14.8□□□□□ -0.04
CPEB1-216ENST00000618449 TCP11L2Q8N4U5 519 aa14.8□□□□□ -0.04
CPEB1-216ENST00000618449 NGEFQ8N5V2 710 aa14.8□□□□□ -0.04
CPEB1-216ENST00000618449 PHF8Q9UPP1 1060 aa14.8□□□□□ -0.04
CPEB1-216ENST00000618449 IQSEC2Q5JU85 1478 aa14.8□□□□□ -0.04
CPEB1-216ENST00000618449 CDK12Q9NYV4 1490 aaPredicted RBP14.79□□□□□ -0.04
CPEB1-216ENST00000618449 RRP7AQ9Y3A4 280 aaKnown RBP14.78□□□□□ -0.04
CPEB1-216ENST00000618449 RRP1P56182 461 aaKnown RBP14.78□□□□□ -0.04
CPEB1-216ENST00000618449 NEUROD2Q15784 382 aa14.78□□□□□ -0.04
CPEB1-216ENST00000618449 ESCO1Q5FWF5 840 aa14.78□□□□□ -0.04
CPEB1-216ENST00000618449 RCAN3Q9UKA8 241 aa14.78□□□□□ -0.04
CPEB1-216ENST00000618449 USP31Q70CQ4 1352 aa14.78□□□□□ -0.04
CPEB1-216ENST00000618449 PLEKHF1Q96S99 279 aa14.77□□□□□ -0.04
CPEB1-216ENST00000618449 DUSP27Q5VZP5 1158 aa14.77□□□□□ -0.05
CPEB1-216ENST00000618449 WWC1Q8IX03 1113 aa14.77□□□□□ -0.05
CPEB1-216ENST00000618449 STRCP1A6NGW2 1772 aa14.77□□□□□ -0.05
CPEB1-216ENST00000618449 PIK3C2AO00443 1686 aa14.77□□□□□ -0.05
CPEB1-216ENST00000618449 SLFN5Q08AF3 891 aa14.76□□□□□ -0.05
CPEB1-216ENST00000618449 SPINK5Q9NQ38 1064 aaPredicted RBP14.76□□□□□ -0.05
CPEB1-216ENST00000618449 DMRT2Q9Y5R5 561 aa14.76□□□□□ -0.05
CPEB1-216ENST00000618449 IL13P35225 146 aa14.76□□□□□ -0.05
CPEB1-216ENST00000618449 SOX12O15370 315 aa14.75□□□□□ -0.05
CPEB1-216ENST00000618449 C19orf44Q9H6X5 657 aa14.75□□□□□ -0.05
CPEB1-216ENST00000618449 TMEM94Q12767 1356 aa14.75□□□□□ -0.05
CPEB1-216ENST00000618449 ORAI2Q96SN7 254 aa14.75□□□□□ -0.05
CPEB1-216ENST00000618449 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
CPEB1-216ENST00000618449 PAK3O75914 559 aaPredicted RBP14.74□□□□□ -0.05
CPEB1-216ENST00000618449 NLRP6P59044 892 aa14.74□□□□□ -0.05
CPEB1-216ENST00000618449 TRMT2AQ8IZ69 625 aaKnown RBP14.74□□□□□ -0.05
CPEB1-216ENST00000618449 STRCQ7RTU9 1775 aa14.74□□□□□ -0.05
CPEB1-216ENST00000618449 FCHSD2O94868 740 aa14.73□□□□□ -0.05
CPEB1-216ENST00000618449 NUTM2GQ5VZR2 741 aa14.73□□□□□ -0.05
CPEB1-216ENST00000618449 ABTB2Q8N961 1025 aa14.73□□□□□ -0.05
CPEB1-216ENST00000618449 CCDC136Q96JN2 1154 aa14.73□□□□□ -0.05
CPEB1-216ENST00000618449 E9PSI1 815 aa14.73□□□□□ -0.05
CPEB1-216ENST00000618449 PSME1Q06323 249 aa14.73□□□□□ -0.05
CPEB1-216ENST00000618449 CCDC27Q2M243 656 aa14.73□□□□□ -0.05
CPEB1-216ENST00000618449 MAPK8IP3Q9UPT6 1336 aa14.73□□□□□ -0.05
CPEB1-216ENST00000618449 NCBP3Q53F19 620 aaKnown RBP14.72□□□□□ -0.05
CPEB1-216ENST00000618449 RSPH6AQ9H0K4 717 aa14.72□□□□□ -0.05
CPEB1-216ENST00000618449 LRRC7Q96NW7 1537 aa14.72□□□□□ -0.05
CPEB1-216ENST00000618449 HMOX1P09601 288 aa14.72□□□□□ -0.05
CPEB1-216ENST00000618449 PNNQ9H307 717 aaKnown RBP14.72□□□□□ -0.05
CPEB1-216ENST00000618449 PEAK1Q9H792 1746 aa14.72□□□□□ -0.05
CPEB1-216ENST00000618449 TMPOP42166 694 aaKnown RBP14.71□□□□□ -0.05
CPEB1-216ENST00000618449 MAP3K19Q56UN5 1328 aa14.71□□□□□ -0.05
CPEB1-216ENST00000618449 MARF1Q9Y4F3 1742 aaKnown RBP14.71□□□□□ -0.05
CPEB1-216ENST00000618449 C1orf167Q5SNV9 1468 aa14.71□□□□□ -0.05
CPEB1-216ENST00000618449 FOXO3O43524 673 aa14.71□□□□□ -0.05
CPEB1-216ENST00000618449 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.05
CPEB1-216ENST00000618449 PRKAR2BP31323 418 aa14.71□□□□□ -0.05
CPEB1-216ENST00000618449 HSP90AB2PQ58FF8 381 aa14.71□□□□□ -0.05
CPEB1-216ENST00000618449 NCOA3Q9Y6Q9 1424 aa14.7□□□□□ -0.06
CPEB1-216ENST00000618449 EIF4A2Q14240 407 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms