RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ZNF518AQ6AHZ1 1483 aa13.49□□□□□ -0.25
POLR2A-209ENST00000617998 CDK13Q14004 1512 aaKnown RBP13.49□□□□□ -0.25
POLR2A-209ENST00000617998 ZNF526Q8TF50 670 aaPredicted RBP13.49□□□□□ -0.25
POLR2A-209ENST00000617998 RTCBQ9Y3I0 505 aaKnown RBP13.49□□□□□ -0.25
POLR2A-209ENST00000617998 HFM1A2PYH4 1435 aa13.49□□□□□ -0.25
POLR2A-209ENST00000617998 MPHOSPH10O00566 681 aaKnown RBP13.49□□□□□ -0.25
POLR2A-209ENST00000617998 ATAD2Q6PL18 1390 aa13.48□□□□□ -0.25
POLR2A-209ENST00000617998 SLC3A2P08195 630 aaKnown RBP13.48□□□□□ -0.25
POLR2A-209ENST00000617998 GNAI1P63096 354 aa13.48□□□□□ -0.25
POLR2A-209ENST00000617998 ZNF408Q9H9D4 720 aa13.48□□□□□ -0.25
POLR2A-209ENST00000617998 CUL7Q14999 1698 aa13.48□□□□□ -0.25
POLR2A-209ENST00000617998 DHX29Q7Z478 1369 aaKnown RBP13.48□□□□□ -0.25
POLR2A-209ENST00000617998 CDCA7Q9BWT1 371 aaPredicted RBP13.48□□□□□ -0.25
POLR2A-209ENST00000617998 WDR62O43379 1518 aa13.48□□□□□ -0.25
POLR2A-209ENST00000617998 IBSPP21815 317 aaPredicted RBP13.48□□□□□ -0.25
POLR2A-209ENST00000617998 TOP2BQ02880 1626 aa13.48□□□□□ -0.25
POLR2A-209ENST00000617998 TRDNQ13061 729 aa13.48□□□□□ -0.25
POLR2A-209ENST00000617998 RRS1Q15050 365 aaKnown RBP13.48□□□□□ -0.25
POLR2A-209ENST00000617998 CCDC34Q96HJ3 373 aa13.48□□□□□ -0.25
POLR2A-209ENST00000617998 CCDC30Q5VVM6 783 aa13.47□□□□□ -0.25
POLR2A-209ENST00000617998 NBPF6Q5VWK0 638 aa13.47□□□□□ -0.25
POLR2A-209ENST00000617998 NBPF5PQ86XG9 351 aaPredicted RBP13.47□□□□□ -0.25
POLR2A-209ENST00000617998 NBPF4Q96M43 638 aa13.47□□□□□ -0.25
POLR2A-209ENST00000617998 DPY19L2Q6NUT2 758 aa13.47□□□□□ -0.25
POLR2A-209ENST00000617998 AMOTQ4VCS5 1084 aa13.47□□□□□ -0.25
POLR2A-209ENST00000617998 WASLO00401 505 aaPredicted RBP13.47□□□□□ -0.25
POLR2A-209ENST00000617998 WASHC4Q2M389 1173 aa13.47□□□□□ -0.25
POLR2A-209ENST00000617998 CLUAP1Q96AJ1 413 aa13.47□□□□□ -0.25
POLR2A-209ENST00000617998 CHMP4BP1P59074 171 aa13.46□□□□□ -0.25
POLR2A-209ENST00000617998 CCDC57Q2TAC2 916 aa13.46□□□□□ -0.25
POLR2A-209ENST00000617998 ZCRB1Q8TBF4 217 aaKnown RBP13.46□□□□□ -0.25
POLR2A-209ENST00000617998 EHBP1L1Q8N3D4 1523 aa13.46□□□□□ -0.25
POLR2A-209ENST00000617998 DDX46Q7L014 1031 aaKnown RBP13.46□□□□□ -0.25
POLR2A-209ENST00000617998 TEX13AQ9BXU3 409 aaPredicted RBP13.46□□□□□ -0.25
POLR2A-209ENST00000617998 HDAC9Q9UKV0 1011 aa13.46□□□□□ -0.26
POLR2A-209ENST00000617998 GJA3Q9Y6H8 435 aa13.46□□□□□ -0.26
POLR2A-209ENST00000617998 USHBP1Q8N6Y0 703 aa13.45□□□□□ -0.26
POLR2A-209ENST00000617998 SETDB2Q96T68 719 aa13.45□□□□□ -0.26
POLR2A-209ENST00000617998 ANKRD24Q8TF21 1146 aa13.44□□□□□ -0.26
POLR2A-209ENST00000617998 EAPPQ56P03 285 aaPredicted RBP13.44□□□□□ -0.26
POLR2A-209ENST00000617998 HSP90AB3PQ58FF7 597 aa13.44□□□□□ -0.26
POLR2A-209ENST00000617998 CHAF1AQ13111 956 aaPredicted RBP13.44□□□□□ -0.26
POLR2A-209ENST00000617998 B4GALNT3Q6L9W6 998 aa13.44□□□□□ -0.26
POLR2A-209ENST00000617998 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
POLR2A-209ENST00000617998 OGFOD1Q8N543 542 aa13.44□□□□□ -0.26
POLR2A-209ENST00000617998 IFNL2Q8IZJ0 200 aa13.44□□□□□ -0.26
POLR2A-209ENST00000617998 USP47Q96K76 1375 aa13.44□□□□□ -0.26
POLR2A-209ENST00000617998 CCNL1Q9UK58 526 aaPredicted RBP13.43□□□□□ -0.26
POLR2A-209ENST00000617998 CRACR2BQ8N4Y2 399 aaPredicted RBP13.43□□□□□ -0.26
POLR2A-209ENST00000617998 CCDC87Q9NVE4 849 aa13.43□□□□□ -0.26
POLR2A-209ENST00000617998 BCS1LQ9Y276 419 aa13.43□□□□□ -0.26
POLR2A-209ENST00000617998 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
POLR2A-209ENST00000617998 ABCC2Q92887 1545 aa13.43□□□□□ -0.26
POLR2A-209ENST00000617998 IL2RBP14784 551 aa13.43□□□□□ -0.26
POLR2A-209ENST00000617998 HDGFL1Q5TGJ6 251 aa13.43□□□□□ -0.26
POLR2A-209ENST00000617998 VTI1AQ96AJ9 217 aa13.43□□□□□ -0.26
POLR2A-209ENST00000617998 SLC12A5Q9H2X9 1139 aa13.43□□□□□ -0.26
POLR2A-209ENST00000617998 ATP10AO60312 1499 aa13.43□□□□□ -0.26
POLR2A-209ENST00000617998 CPLX2Q6PUV4 134 aaKnown RBP13.43□□□□□ -0.26
POLR2A-209ENST00000617998 A2MP01023 1474 aa13.43□□□□□ -0.26
POLR2A-209ENST00000617998 RBM26Q5T8P6 1007 aaKnown RBP13.42□□□□□ -0.26
POLR2A-209ENST00000617998 TRAPPC3LQ5T215 181 aa13.42□□□□□ -0.26
POLR2A-209ENST00000617998 NOL8Q76FK4 1167 aaKnown RBP13.42□□□□□ -0.26
POLR2A-209ENST00000617998 NFXL1Q6ZNB6 911 aa13.42□□□□□ -0.26
POLR2A-209ENST00000617998 CRBNQ96SW2 442 aa13.42□□□□□ -0.26
POLR2A-209ENST00000617998 EIF6P56537 245 aaKnown RBP13.41□□□□□ -0.26
POLR2A-209ENST00000617998 HSP90AB4PQ58FF6 505 aa13.41□□□□□ -0.26
POLR2A-209ENST00000617998 ZNF428Q96B54 188 aa13.41□□□□□ -0.26
POLR2A-209ENST00000617998 KIF21AQ7Z4S6 1674 aa13.41□□□□□ -0.26
POLR2A-209ENST00000617998 RIMS2Q9UQ26 1411 aa13.41□□□□□ -0.26
POLR2A-209ENST00000617998 FCHSD2O94868 740 aa13.4□□□□□ -0.26
POLR2A-209ENST00000617998 RILPL2Q969X0 211 aa13.4□□□□□ -0.26
POLR2A-209ENST00000617998 UNC13AQ9UPW8 1703 aa13.4□□□□□ -0.26
POLR2A-209ENST00000617998 PLCH2O75038 1416 aa13.4□□□□□ -0.26
POLR2A-209ENST00000617998 PRKAR2BP31323 418 aa13.4□□□□□ -0.26
POLR2A-209ENST00000617998 TTC39AQ5SRH9 613 aa13.4□□□□□ -0.26
POLR2A-209ENST00000617998 TRMT112Q9UI30 125 aaKnown RBP13.4□□□□□ -0.26
POLR2A-209ENST00000617998 PPP1R42Q7Z4L9 355 aa13.4□□□□□ -0.26
POLR2A-209ENST00000617998 API5Q9BZZ5 524 aaKnown RBP13.4□□□□□ -0.26
POLR2A-209ENST00000617998 CCDC158Q5M9N0 1113 aa13.4□□□□□ -0.26
POLR2A-209ENST00000617998 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
POLR2A-209ENST00000617998 LRRC9Q6ZRR7 1453 aa13.4□□□□□ -0.26
POLR2A-209ENST00000617998 UBTFL1P0CB47 393 aaPredicted RBP13.4□□□□□ -0.27
POLR2A-209ENST00000617998 CAVIN4Q5BKX8 364 aa13.4□□□□□ -0.27
POLR2A-209ENST00000617998 DIAPH3Q9NSV4 1193 aa13.4□□□□□ -0.27
POLR2A-209ENST00000617998 KRT27Q7Z3Y8 459 aa13.39□□□□□ -0.27
POLR2A-209ENST00000617998 GNPATO15228 680 aa13.38□□□□□ -0.27
POLR2A-209ENST00000617998 KIAA2012Q0VF49 1180 aa13.38□□□□□ -0.27
POLR2A-209ENST00000617998 EIF4G3O43432 1585 aaKnown RBP13.38□□□□□ -0.27
POLR2A-209ENST00000617998 KIF3AQ9Y496 699 aa13.38□□□□□ -0.27
POLR2A-209ENST00000617998 TCP11L2Q8N4U5 519 aa13.38□□□□□ -0.27
POLR2A-209ENST00000617998 GNAT3A8MTJ3 354 aa13.37□□□□□ -0.27
POLR2A-209ENST00000617998 RAI14Q9P0K7 980 aa13.37□□□□□ -0.27
POLR2A-209ENST00000617998 FAM196AQ6ZSG2 479 aa13.37□□□□□ -0.27
POLR2A-209ENST00000617998 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
POLR2A-209ENST00000617998 ABCC10Q5T3U5 1492 aa13.37□□□□□ -0.27
POLR2A-209ENST00000617998 CHMP4CQ96CF2 233 aa13.37□□□□□ -0.27
POLR2A-209ENST00000617998 NAIPQ13075 1403 aa13.37□□□□□ -0.27
POLR2A-209ENST00000617998 ECM2O94769 699 aaPredicted RBP13.37□□□□□ -0.27
POLR2A-209ENST00000617998 FMNL2Q96PY5 1086 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms