RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 BMS1Q14692 1282 aaKnown RBP8.89□□□□□ -0.99
PDE6A-205ENST00000617647 GORABQ5T7V8 394 aa8.89□□□□□ -0.99
PDE6A-205ENST00000617647 CCDC91Q7Z6B0 441 aa8.89□□□□□ -0.99
PDE6A-205ENST00000617647 SMC5Q8IY18 1101 aa8.89□□□□□ -0.99
PDE6A-205ENST00000617647 FAM184AQ8NB25 1140 aa8.89□□□□□ -0.99
PDE6A-205ENST00000617647 CCDC9Q9Y3X0 531 aaKnown RBP8.89□□□□□ -0.99
PDE6A-205ENST00000617647 DMRT2Q9Y5R5 561 aa8.89□□□□□ -0.99
PDE6A-205ENST00000617647 HNRNPH2P55795 449 aaKnown RBP8.89□□□□□ -0.99
PDE6A-205ENST00000617647 LRRFIP2Q9Y608 721 aaKnown RBP8.89□□□□□ -0.99
PDE6A-205ENST00000617647 NCOA2Q15596 1464 aa8.89□□□□□ -0.99
PDE6A-205ENST00000617647 OS9Q13438 667 aaPredicted RBP8.89□□□□□ -0.99
PDE6A-205ENST00000617647 EP400NLQ6ZTU2 488 aa8.89□□□□□ -0.99
PDE6A-205ENST00000617647 ZNF397Q8NF99 534 aaPredicted RBP8.89□□□□□ -0.99
PDE6A-205ENST00000617647 CASKIN1Q8WXD9 1431 aa8.89□□□□□ -0.99
PDE6A-205ENST00000617647 GEMIN8Q9NWZ8 242 aaKnown RBP8.89□□□□□ -0.99
PDE6A-205ENST00000617647 CT47A1Q5JQC4 288 aaPredicted RBP8.88□□□□□ -0.99
PDE6A-205ENST00000617647 A0A1B0GUL7 405 aa8.88□□□□□ -0.99
PDE6A-205ENST00000617647 CCAR2Q8N163 923 aaKnown RBP8.88□□□□□ -0.99
PDE6A-205ENST00000617647 MNS1Q8NEH6 495 aa8.88□□□□□ -0.99
PDE6A-205ENST00000617647 GIMAP7Q8NHV1 300 aa8.88□□□□□ -0.99
PDE6A-205ENST00000617647 HSP90AB3PQ58FF7 597 aa8.88□□□□□ -0.99
PDE6A-205ENST00000617647 ANKRD45Q5TZF3 282 aa8.88□□□□□ -0.99
PDE6A-205ENST00000617647 KDM5BQ9UGL1 1544 aa8.87□□□□□ -0.99
PDE6A-205ENST00000617647 LMAN1P49257 510 aa8.87□□□□□ -0.99
PDE6A-205ENST00000617647 ICE2Q659A1 982 aa8.87□□□□□ -0.99
PDE6A-205ENST00000617647 CHMP3Q9Y3E7 222 aa8.87□□□□□ -0.99
PDE6A-205ENST00000617647 MNAT1P51948 309 aa8.87□□□□□ -0.99
PDE6A-205ENST00000617647 ZRSR1Q15695 479 aaKnown RBP8.87□□□□□ -0.99
PDE6A-205ENST00000617647 TRIM5Q9C035 493 aa8.87□□□□□ -0.99
PDE6A-205ENST00000617647 AQRO60306 1485 aaKnown RBP eCLIP8.87□□□□□ -0.99
PDE6A-205ENST00000617647 RDXP35241 583 aaKnown RBP8.87□□□□□ -0.99
PDE6A-205ENST00000617647 MLECQ14165 292 aa8.87□□□□□ -0.99
PDE6A-205ENST00000617647 TMCO3Q6UWJ1 677 aa8.87□□□□□ -0.99
PDE6A-205ENST00000617647 NEK11Q8NG66 645 aa8.87□□□□□ -0.99
PDE6A-205ENST00000617647 PLCD4Q9BRC7 762 aa8.87□□□□□ -0.99
PDE6A-205ENST00000617647 FEZ2Q9UHY8 353 aaPredicted RBP8.87□□□□□ -0.99
PDE6A-205ENST00000617647 RAD51AP2Q09MP3 1159 aa8.86□□□□□ -0.99
PDE6A-205ENST00000617647 HOMER1Q86YM7 354 aa8.86□□□□□ -0.99
PDE6A-205ENST00000617647 CASQ1P31415 396 aa8.86□□□□□ -0.99
PDE6A-205ENST00000617647 DUSP27Q5VZP5 1158 aa8.86□□□□□ -0.99
PDE6A-205ENST00000617647 GAS2L2Q8NHY3 880 aa8.86□□□□□ -0.99
PDE6A-205ENST00000617647 SLC20A2Q08357 652 aa8.86□□□□□ -0.99
PDE6A-205ENST00000617647 ANKRD20A12PQ8NF67 263 aa8.86□□□□□ -0.99
PDE6A-205ENST00000617647 NESP48681 1621 aa8.86□□□□□ -0.99
PDE6A-205ENST00000617647 IBSPP21815 317 aaPredicted RBP8.85□□□□□ -0.99
PDE6A-205ENST00000617647 SSR1P43307 286 aaKnown RBP8.85□□□□□ -0.99
PDE6A-205ENST00000617647 RGL3Q3MIN7 710 aa8.85□□□□□ -0.99
PDE6A-205ENST00000617647 APBB1O00213 710 aa8.85□□□□□ -0.99
PDE6A-205ENST00000617647 HCLS1P14317 486 aaPredicted RBP8.85□□□□□ -0.99
PDE6A-205ENST00000617647 E2F4Q16254 413 aa8.85□□□□□ -0.99
PDE6A-205ENST00000617647 DNAAF4Q8WXU2 420 aa8.85□□□□□ -0.99
PDE6A-205ENST00000617647 NCAPGQ9BPX3 1015 aa8.85□□□□□ -0.99
PDE6A-205ENST00000617647 ZBTB12Q9Y330 459 aaPredicted RBP8.85□□□□□ -0.99
PDE6A-205ENST00000617647 CEP83Q9Y592 693 aa8.85□□□□□ -0.99
PDE6A-205ENST00000617647 SMTNL1A8MU46 457 aa8.85□□□□□ -0.99
PDE6A-205ENST00000617647 SART3Q15020 963 aaKnown RBP8.85□□□□□ -0.99
PDE6A-205ENST00000617647 SNX21Q969T3 373 aa8.85□□□□□ -0.99
PDE6A-205ENST00000617647 YY1AP1Q9H869 796 aa8.85□□□□□ -0.99
PDE6A-205ENST00000617647 CWC22Q9HCG8 908 aaKnown RBP8.85□□□□□ -0.99
PDE6A-205ENST00000617647 RRP7AQ9Y3A4 280 aaKnown RBP8.85□□□□□ -0.99
PDE6A-205ENST00000617647 PAXBP1Q9Y5B6 917 aa8.85□□□□□ -0.99
PDE6A-205ENST00000617647 SAMD9Q5K651 1589 aa8.85□□□□□ -0.99
PDE6A-205ENST00000617647 LAMC3Q9Y6N6 1575 aa8.84□□□□□ -0.99
PDE6A-205ENST00000617647 H0YHG0 523 aa8.84□□□□□ -0.99
PDE6A-205ENST00000617647 SLFN14P0C7P3 912 aa8.84□□□□□ -0.99
PDE6A-205ENST00000617647 RBM42Q9BTD8 480 aaKnown RBP8.84□□□□□ -0.99
PDE6A-205ENST00000617647 JRKLQ9Y4A0 524 aa8.84□□□□□ -0.99
PDE6A-205ENST00000617647 CCDC172P0C7W6 258 aa8.84□□□□□ -0.99
PDE6A-205ENST00000617647 USP8P40818 1118 aa8.84□□□□□ -0.99
PDE6A-205ENST00000617647 FKBP5Q13451 457 aaPredicted RBP8.84□□□□□ -0.99
PDE6A-205ENST00000617647 RABEP1Q15276 862 aa8.84□□□□□ -0.99
PDE6A-205ENST00000617647 LRCH2Q5VUJ6 765 aa8.84□□□□□ -0.99
PDE6A-205ENST00000617647 DHX16O60231 1041 aaKnown RBP8.84□□□□□ -0.99
PDE6A-205ENST00000617647 PTPN14Q15678 1187 aa8.84□□□□□ -0.99
PDE6A-205ENST00000617647 CFAP44Q96MT7 982 aa8.84□□□□□ -0.99
PDE6A-205ENST00000617647 GOLGA6L19H0YKK7 550 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 MAP2K2P36507 400 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 ZKSCAN2Q63HK3 967 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 PDLIM2Q96JY6 352 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 LRPPRCP42704 1394 aaKnown RBP8.83□□□□□ -1
PDE6A-205ENST00000617647 MCCP23508 829 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 SARNPP82979 210 aaKnown RBP8.83□□□□□ -1
PDE6A-205ENST00000617647 RNF20Q5VTR2 975 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 CEP135Q66GS9 1140 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 SYT10Q6XYQ8 523 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 FGD6Q6ZV73 1430 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 CREBRFQ8IUR6 639 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 KCNG1Q9UIX4 513 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 DDX41Q9UJV9 622 aaKnown RBP8.83□□□□□ -1
PDE6A-205ENST00000617647 ZNF777Q9ULD5 760 aaPredicted RBP8.83□□□□□ -1
PDE6A-205ENST00000617647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.83□□□□□ -1
PDE6A-205ENST00000617647 SLFN5Q08AF3 891 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 UVSSAQ2YD98 709 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.83□□□□□ -1
PDE6A-205ENST00000617647 KIF21AQ7Z4S6 1674 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 TMF1P82094 1093 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 PPP2R5AQ15172 486 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 ZSCAN26Q16670 478 aa8.83□□□□□ -1
PDE6A-205ENST00000617647 DZIP1LQ8IYY4 767 aaKnown RBP8.83□□□□□ -1
PDE6A-205ENST00000617647 KIF18AQ8NI77 898 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms