RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-223	ENST00000617585	ROCK2	O75116	1388 aa	Known RBP	32.07	■■■□□ 2.72
ARHGEF1-223	ENST00000617585	NBPF8	Q3BBV2	869 aa		32.06	■■■□□ 2.72
ARHGEF1-223	ENST00000617585	ACE	P12821	1306 aa		32.05	■■■□□ 2.72
ARHGEF1-223	ENST00000617585	GLI3	P10071	1580 aa		32.04	■■■□□ 2.72
ARHGEF1-223	ENST00000617585	COL14A1	Q05707	1796 aa	Known RBP	32.02	■■■□□ 2.72
ARHGEF1-223	ENST00000617585	FAM83G	A6ND36	823 aa		32.01	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	SRPK2	P78362	688 aa	Known RBP	32.01	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	RALGAPB	Q86X10	1494 aa		32.01	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	PPIP5K1	Q6PFW1	1433 aa		32	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	PAK3	O75914	559 aa	Predicted RBP	32	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	NRAP	Q86VF7	1730 aa		32	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	CABP2	Q9NPB3	220 aa		31.99	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	PHRF1	Q9P1Y6	1649 aa	Known RBP	31.98	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	VPS72	Q15906	364 aa		31.98	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	BRD4	O60885	1362 aa	Predicted RBP	31.97	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	TONSL	Q96HA7	1378 aa		31.96	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	EVC2	Q86UK5	1308 aa		31.96	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	PLEKHG5	O94827	1062 aa		31.95	■■■□□ 2.71
ARHGEF1-223	ENST00000617585	ATAD2	Q6PL18	1390 aa		31.94	■■■□□ 2.7
ARHGEF1-223	ENST00000617585	SBNO2	Q9Y2G9	1366 aa		31.94	■■■□□ 2.7
ARHGEF1-223	ENST00000617585	ONECUT3	O60422	494 aa	Predicted RBP	31.91	■■■□□ 2.7
ARHGEF1-223	ENST00000617585	CABP1	Q9NZU7	370 aa		31.89	■■■□□ 2.7
ARHGEF1-223	ENST00000617585	BRWD3	Q6RI45	1802 aa		31.89	■■■□□ 2.69
ARHGEF1-223	ENST00000617585	EP400	Q96L91	3159 aa		31.88	■■■□□ 2.69
ARHGEF1-223	ENST00000617585	BTG4	Q9NY30	223 aa		31.88	■■■□□ 2.69
ARHGEF1-223	ENST00000617585	USP6	P35125	1406 aa		31.87	■■■□□ 2.69
ARHGEF1-223	ENST00000617585	SSH2	Q76I76	1423 aa		31.86	■■■□□ 2.69
ARHGEF1-223	ENST00000617585	USP19	O94966	1318 aa		31.86	■■■□□ 2.69
ARHGEF1-223	ENST00000617585	CARD11	Q9BXL7	1154 aa		31.86	■■■□□ 2.69
ARHGEF1-223	ENST00000617585	NRK	Q7Z2Y5	1582 aa		31.85	■■■□□ 2.69
ARHGEF1-223	ENST00000617585	ABTB2	Q8N961	1025 aa		31.85	■■■□□ 2.69
ARHGEF1-223	ENST00000617585	AKAP12	Q02952	1782 aa		31.85	■■■□□ 2.69
ARHGEF1-223	ENST00000617585	KIAA0232	Q92628	1395 aa		31.84	■■■□□ 2.69
ARHGEF1-223	ENST00000617585	PRDM11	Q9NQV5	511 aa		31.84	■■■□□ 2.69
ARHGEF1-223	ENST00000617585	NUTM2G	Q5VZR2	741 aa		31.81	■■■□□ 2.68
ARHGEF1-223	ENST00000617585	CPD	O75976	1380 aa		31.81	■■■□□ 2.68
ARHGEF1-223	ENST00000617585	NLRP13	Q86W25	1043 aa		31.8	■■■□□ 2.68
ARHGEF1-223	ENST00000617585	SEPT12	Q8IYM1	358 aa		31.79	■■■□□ 2.68
ARHGEF1-223	ENST00000617585	ZNF692	Q9BU19	519 aa	Predicted RBP	31.79	■■■□□ 2.68
ARHGEF1-223	ENST00000617585	CCDC9	Q9Y3X0	531 aa	Known RBP	31.78	■■■□□ 2.68
ARHGEF1-223	ENST00000617585	SPATA31A5	Q5VU36	1347 aa		31.77	■■■□□ 2.68
ARHGEF1-223	ENST00000617585	SPATA31A7	Q8IWB4	1347 aa		31.77	■■■□□ 2.68
ARHGEF1-223	ENST00000617585	LMO7	Q8WWI1	1683 aa		31.77	■■■□□ 2.68
ARHGEF1-223	ENST00000617585	CPSF1	Q10570	1443 aa	Known RBP	31.77	■■■□□ 2.68
ARHGEF1-223	ENST00000617585	CCDC125	Q86Z20	511 aa		31.77	■■■□□ 2.68
ARHGEF1-223	ENST00000617585	PIK3C2A	O00443	1686 aa		31.76	■■■□□ 2.68
ARHGEF1-223	ENST00000617585	SLIT3	O75094	1523 aa		31.75	■■■□□ 2.67
ARHGEF1-223	ENST00000617585	ZC3H6	P61129	1189 aa	Known RBP	31.75	■■■□□ 2.67
ARHGEF1-223	ENST00000617585	GC	P02774	474 aa		31.74	■■■□□ 2.67
ARHGEF1-223	ENST00000617585	CHRNA2	Q15822	529 aa		31.73	■■■□□ 2.67
ARHGEF1-223	ENST00000617585	MON2	Q7Z3U7	1717 aa		31.72	■■■□□ 2.67
ARHGEF1-223	ENST00000617585	PUS7	Q96PZ0	661 aa	Known RBP	31.72	■■■□□ 2.67
ARHGEF1-223	ENST00000617585	THSD7A	Q9UPZ6	1657 aa		31.72	■■■□□ 2.67
ARHGEF1-223	ENST00000617585	CAMTA1	Q9Y6Y1	1673 aa		31.71	■■■□□ 2.67
ARHGEF1-223	ENST00000617585	NLRP6	P59044	892 aa		31.69	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	FAM98C	Q17RN3	349 aa	Known RBP	31.69	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	TTC21B	Q7Z4L5	1316 aa		31.69	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	TTC21A	Q8NDW8	1320 aa		31.69	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	CLSPN	Q9HAW4	1339 aa		31.69	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	KRT27	Q7Z3Y8	459 aa		31.68	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	SPATA31A1	Q5TZJ5	1347 aa		31.68	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	BLM	P54132	1417 aa	Predicted RBP	31.66	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	CD163L1	Q9NR16	1453 aa		31.65	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	TESK2	Q96S53	571 aa		31.65	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	TIMELESS	Q9UNS1	1208 aa		31.65	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	COL18A1	P39060	1754 aa		31.64	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	KTN1	Q86UP2	1357 aa	Known RBP	31.64	■■■□□ 2.66
ARHGEF1-223	ENST00000617585	USP54	Q70EL1	1684 aa		31.64	■■■□□ 2.65
ARHGEF1-223	ENST00000617585	SLC24A1	O60721	1099 aa		31.63	■■■□□ 2.65
ARHGEF1-223	ENST00000617585	AATK	Q6ZMQ8	1374 aa		31.62	■■■□□ 2.65
ARHGEF1-223	ENST00000617585	STRN4	Q9NRL3	753 aa		31.61	■■■□□ 2.65
ARHGEF1-223	ENST00000617585	COL5A2	P05997	1499 aa	Predicted RBP	31.6	■■■□□ 2.65
ARHGEF1-223	ENST00000617585	ST20-MTHFS	A0A0A6YYL1	179 aa		31.6	■■■□□ 2.65
ARHGEF1-223	ENST00000617585	EVA1C	P58658	441 aa		31.59	■■■□□ 2.65
ARHGEF1-223	ENST00000617585	BARGIN	Q6ZT62	677 aa		31.59	■■■□□ 2.65
ARHGEF1-223	ENST00000617585	KCNH5	Q8NCM2	988 aa		31.57	■■■□□ 2.64
ARHGEF1-223	ENST00000617585	USP31	Q70CQ4	1352 aa		31.56	■■■□□ 2.64
ARHGEF1-223	ENST00000617585		A0A0G2JS52	829 aa		31.56	■■■□□ 2.64
ARHGEF1-223	ENST00000617585	MYT1	Q01538	1121 aa		31.56	■■■□□ 2.64
ARHGEF1-223	ENST00000617585	LARP1	Q6PKG0	1096 aa	Known RBP	31.56	■■■□□ 2.64
ARHGEF1-223	ENST00000617585	SLC12A5	Q9H2X9	1139 aa		31.56	■■■□□ 2.64
ARHGEF1-223	ENST00000617585	NINL	Q9Y2I6	1382 aa		31.55	■■■□□ 2.64
ARHGEF1-223	ENST00000617585	NFAT5	O94916	1531 aa		31.54	■■■□□ 2.64
ARHGEF1-223	ENST00000617585	ARHGEF25	Q86VW2	580 aa		31.54	■■■□□ 2.64
ARHGEF1-223	ENST00000617585	THRAP3	Q9Y2W1	955 aa	Known RBP	31.54	■■■□□ 2.64
ARHGEF1-223	ENST00000617585	EDC4	Q6P2E9	1401 aa	Known RBP	31.52	■■■□□ 2.64
ARHGEF1-223	ENST00000617585	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	31.52	■■■□□ 2.64
ARHGEF1-223	ENST00000617585	TMC1	Q8TDI8	760 aa		31.52	■■■□□ 2.64
ARHGEF1-223	ENST00000617585	ABCC6	O95255	1503 aa		31.51	■■■□□ 2.63
ARHGEF1-223	ENST00000617585	TCP11L2	Q8N4U5	519 aa		31.51	■■■□□ 2.63
ARHGEF1-223	ENST00000617585	RGPD5	Q99666	1765 aa		31.51	■■■□□ 2.63
ARHGEF1-223	ENST00000617585	CRB1	P82279	1406 aa		31.5	■■■□□ 2.63
ARHGEF1-223	ENST00000617585	PCGF6	Q9BYE7	350 aa		31.5	■■■□□ 2.63
ARHGEF1-223	ENST00000617585	TERF2IP	Q9NYB0	399 aa		31.5	■■■□□ 2.63
ARHGEF1-223	ENST00000617585		A0A1W2PP64	1363 aa		31.5	■■■□□ 2.63
ARHGEF1-223	ENST00000617585	USP47	Q96K76	1375 aa		31.5	■■■□□ 2.63
ARHGEF1-223	ENST00000617585	RGPD1	P0DJD0	1748 aa		31.49	■■■□□ 2.63
ARHGEF1-223	ENST00000617585	PARP4	Q9UKK3	1724 aa	Known RBP	31.49	■■■□□ 2.63
ARHGEF1-223	ENST00000617585	SF3B2	Q13435	895 aa	Known RBP	31.47	■■■□□ 2.63
ARHGEF1-223	ENST00000617585	USP35	Q9P2H5	1018 aa		31.47	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms