RNA–Protein interactions for RNA: ENST00000617575.4

NR2E3-202, Transcript of nuclear receptor subfamily 2 group E member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR2E3, Length 1,998 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3-202ENST00000617575 MTHFSP49914 203 aa20.74■□□□□ 0.91
NR2E3-202ENST00000617575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.73■□□□□ 0.91
NR2E3-202ENST00000617575 PRR36Q9H6K5 1346 aa20.72■□□□□ 0.91
NR2E3-202ENST00000617575 NGEFQ8N5V2 710 aa20.72■□□□□ 0.91
NR2E3-202ENST00000617575 ANKARQ7Z5J8 1434 aa20.72■□□□□ 0.91
NR2E3-202ENST00000617575 SHPRHQ149N8 1683 aa20.71■□□□□ 0.91
NR2E3-202ENST00000617575 PLEKHG3A1L390 1219 aa20.71■□□□□ 0.91
NR2E3-202ENST00000617575 RBM33Q96EV2 1170 aaKnown RBP20.69■□□□□ 0.9
NR2E3-202ENST00000617575 FMN2Q9NZ56 1722 aa20.68■□□□□ 0.9
NR2E3-202ENST00000617575 COG3Q96JB2 828 aa20.68■□□□□ 0.9
NR2E3-202ENST00000617575 SALL2Q9Y467 1007 aaPredicted RBP20.68■□□□□ 0.9
NR2E3-202ENST00000617575 ACEP12821 1306 aa20.67■□□□□ 0.9
NR2E3-202ENST00000617575 NRKQ7Z2Y5 1582 aa20.66■□□□□ 0.9
NR2E3-202ENST00000617575 NWD1Q149M9 1564 aa20.65■□□□□ 0.9
NR2E3-202ENST00000617575 USP6P35125 1406 aa20.65■□□□□ 0.9
NR2E3-202ENST00000617575 NALCNQ8IZF0 1738 aa20.65■□□□□ 0.9
NR2E3-202ENST00000617575 SENP3-EIF4A1A0A087X0R7 540 aa20.65■□□□□ 0.9
NR2E3-202ENST00000617575 NUTM2FA1L443 756 aa20.65■□□□□ 0.9
NR2E3-202ENST00000617575 IRX6P78412 446 aaPredicted RBP20.65■□□□□ 0.9
NR2E3-202ENST00000617575 NKTRP30414 1462 aaKnown RBP20.64■□□□□ 0.89
NR2E3-202ENST00000617575 AATKQ6ZMQ8 1374 aa20.63■□□□□ 0.89
NR2E3-202ENST00000617575 ADGRL3Q9HAR2 1447 aa20.63■□□□□ 0.89
NR2E3-202ENST00000617575 CCDC146Q8IYE0 955 aa20.63■□□□□ 0.89
NR2E3-202ENST00000617575 TTC21AQ8NDW8 1320 aa20.62■□□□□ 0.89
NR2E3-202ENST00000617575 NME9Q86XW9 330 aa20.62■□□□□ 0.89
NR2E3-202ENST00000617575 NGDNQ8NEJ9 315 aaKnown RBP20.62■□□□□ 0.89
NR2E3-202ENST00000617575 RUNDC1Q96C34 613 aa20.62■□□□□ 0.89
NR2E3-202ENST00000617575 TTC21BQ7Z4L5 1316 aa20.62■□□□□ 0.89
NR2E3-202ENST00000617575 RGPD8O14715 1765 aaPredicted RBP20.62■□□□□ 0.89
NR2E3-202ENST00000617575 PNNQ9H307 717 aaKnown RBP20.61■□□□□ 0.89
NR2E3-202ENST00000617575 STRCQ7RTU9 1775 aa20.61■□□□□ 0.89
NR2E3-202ENST00000617575 MAP2P11137 1827 aaKnown RBP20.61■□□□□ 0.89
NR2E3-202ENST00000617575 ANP32AP39687 249 aaKnown RBP20.61■□□□□ 0.89
NR2E3-202ENST00000617575 COL3A1P02461 1466 aaPredicted RBP20.6■□□□□ 0.89
NR2E3-202ENST00000617575 RNF123Q5XPI4 1314 aa20.6■□□□□ 0.89
NR2E3-202ENST00000617575 DIAPH1O60610 1272 aaKnown RBP20.59■□□□□ 0.89
NR2E3-202ENST00000617575 U2AF1L5P0DN76 240 aaPredicted RBP20.59■□□□□ 0.89
NR2E3-202ENST00000617575 U2AF1Q01081 240 aaKnown RBP eCLIP20.59■□□□□ 0.89
NR2E3-202ENST00000617575 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
NR2E3-202ENST00000617575 APAF1O14727 1248 aa20.59■□□□□ 0.89
NR2E3-202ENST00000617575 C14orf37Q86TY3 774 aa20.59■□□□□ 0.89
NR2E3-202ENST00000617575 GOLGA2Q08379 1002 aa20.58■□□□□ 0.89
NR2E3-202ENST00000617575 CDK12Q9NYV4 1490 aaPredicted RBP20.57■□□□□ 0.88
NR2E3-202ENST00000617575 IPO9Q96P70 1041 aaKnown RBP20.57■□□□□ 0.88
NR2E3-202ENST00000617575 B4GALNT3Q6L9W6 998 aa20.57■□□□□ 0.88
NR2E3-202ENST00000617575 PMFBP1Q8TBY8 1022 aa20.57■□□□□ 0.88
NR2E3-202ENST00000617575 U2SURPO15042 1029 aaKnown RBP20.56■□□□□ 0.88
NR2E3-202ENST00000617575 RTL5Q5HYW3 569 aaPredicted RBP20.56■□□□□ 0.88
NR2E3-202ENST00000617575 POLKQ9UBT6 870 aa20.56■□□□□ 0.88
NR2E3-202ENST00000617575 ZNF521Q96K83 1311 aa20.56■□□□□ 0.88
NR2E3-202ENST00000617575 NCBP3Q53F19 620 aaKnown RBP20.55■□□□□ 0.88
NR2E3-202ENST00000617575 OVOS2A0A0J9YW53 1432 aa20.55■□□□□ 0.88
NR2E3-202ENST00000617575 OVOS2Q6IE36 1432 aa20.55■□□□□ 0.88
NR2E3-202ENST00000617575 PPM1GO15355 546 aaPredicted RBP20.55■□□□□ 0.88
NR2E3-202ENST00000617575 SSH2Q76I76 1423 aa20.55■□□□□ 0.88
NR2E3-202ENST00000617575 IQSEC2Q5JU85 1478 aa20.54■□□□□ 0.88
NR2E3-202ENST00000617575 NEFMP07197 916 aa20.54■□□□□ 0.88
NR2E3-202ENST00000617575 PROSER2Q86WR7 435 aaPredicted RBP20.54■□□□□ 0.88
NR2E3-202ENST00000617575 STRCP1A6NGW2 1772 aa20.53■□□□□ 0.88
NR2E3-202ENST00000617575 MAPK8IP3Q9UPT6 1336 aa20.53■□□□□ 0.88
NR2E3-202ENST00000617575 CDCA7LQ96GN5 454 aa20.52■□□□□ 0.88
NR2E3-202ENST00000617575 RCAN3Q9UKA8 241 aa20.52■□□□□ 0.88
NR2E3-202ENST00000617575 PRKCSHP14314 528 aaPredicted RBP20.52■□□□□ 0.87
NR2E3-202ENST00000617575 PHF8Q9UPP1 1060 aa20.52■□□□□ 0.87
NR2E3-202ENST00000617575 E9PSI1 815 aa20.51■□□□□ 0.87
NR2E3-202ENST00000617575 TCP11L2Q8N4U5 519 aa20.51■□□□□ 0.87
NR2E3-202ENST00000617575 ZRANB1Q9UGI0 708 aa20.5■□□□□ 0.87
NR2E3-202ENST00000617575 USP35Q9P2H5 1018 aa20.5■□□□□ 0.87
NR2E3-202ENST00000617575 USP31Q70CQ4 1352 aa20.5■□□□□ 0.87
NR2E3-202ENST00000617575 CCDC27Q2M243 656 aa20.49■□□□□ 0.87
NR2E3-202ENST00000617575 EMILIN1Q9Y6C2 1016 aa20.49■□□□□ 0.87
NR2E3-202ENST00000617575 ZBTB47Q9UFB7 747 aaPredicted RBP20.48■□□□□ 0.87
NR2E3-202ENST00000617575 LRRC7Q96NW7 1537 aa20.48■□□□□ 0.87
NR2E3-202ENST00000617575 NCOA3Q9Y6Q9 1424 aa20.48■□□□□ 0.87
NR2E3-202ENST00000617575 FCHSD2O94868 740 aa20.48■□□□□ 0.87
NR2E3-202ENST00000617575 ZNF335Q9H4Z2 1342 aaPredicted RBP20.48■□□□□ 0.87
NR2E3-202ENST00000617575 PIK3C2AO00443 1686 aa20.47■□□□□ 0.87
NR2E3-202ENST00000617575 USP54Q70EL1 1684 aa20.47■□□□□ 0.87
NR2E3-202ENST00000617575 SLFN5Q08AF3 891 aa20.47■□□□□ 0.87
NR2E3-202ENST00000617575 WWC1Q8IX03 1113 aa20.46■□□□□ 0.87
NR2E3-202ENST00000617575 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
NR2E3-202ENST00000617575 RRS1Q15050 365 aaKnown RBP20.46■□□□□ 0.87
NR2E3-202ENST00000617575 DUSP27Q5VZP5 1158 aa20.46■□□□□ 0.87
NR2E3-202ENST00000617575 ESCO1Q5FWF5 840 aa20.45■□□□□ 0.86
NR2E3-202ENST00000617575 WDR63Q8IWG1 891 aa20.45■□□□□ 0.86
NR2E3-202ENST00000617575 C19orf44Q9H6X5 657 aa20.45■□□□□ 0.86
NR2E3-202ENST00000617575 PAK3O75914 559 aaPredicted RBP20.45■□□□□ 0.86
NR2E3-202ENST00000617575 NEUROD2Q15784 382 aa20.45■□□□□ 0.86
NR2E3-202ENST00000617575 KIF1AQ12756 1690 aa20.44■□□□□ 0.86
NR2E3-202ENST00000617575 DCCP43146 1447 aa20.44■□□□□ 0.86
NR2E3-202ENST00000617575 CCDC136Q96JN2 1154 aa20.44■□□□□ 0.86
NR2E3-202ENST00000617575 FBLN1P23142 703 aa20.43■□□□□ 0.86
NR2E3-202ENST00000617575 RRP1P56182 461 aaKnown RBP20.43■□□□□ 0.86
NR2E3-202ENST00000617575 PLEKHF1Q96S99 279 aa20.43■□□□□ 0.86
NR2E3-202ENST00000617575 NLRP6P59044 892 aa20.43■□□□□ 0.86
NR2E3-202ENST00000617575 PSME1Q06323 249 aa20.43■□□□□ 0.86
NR2E3-202ENST00000617575 IL13P35225 146 aa20.42■□□□□ 0.86
NR2E3-202ENST00000617575 NBR1Q14596 966 aa20.42■□□□□ 0.86
NR2E3-202ENST00000617575 TRMT2AQ8IZ69 625 aaKnown RBP20.42■□□□□ 0.86
NR2E3-202ENST00000617575 ABTB2Q8N961 1025 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms