RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 NPAS3Q8IXF0 933 aa8.93□□□□□ -0.98
MALAT1-210ENST00000617489 ZSCAN1Q8NBB4 408 aa8.92□□□□□ -0.98
MALAT1-210ENST00000617489 BEGAINQ9BUH8 593 aa8.91□□□□□ -0.98
MALAT1-210ENST00000617489 WDR4P57081 412 aaKnown RBP8.9□□□□□ -0.98
MALAT1-210ENST00000617489 ARID5BQ14865 1188 aa8.9□□□□□ -0.98
MALAT1-210ENST00000617489 DESI1Q6ICB0 168 aa8.9□□□□□ -0.98
MALAT1-210ENST00000617489 MRPL14Q6P1L8 145 aaKnown RBP8.9□□□□□ -0.98
MALAT1-210ENST00000617489 GIGYF2Q6Y7W6 1299 aaKnown RBP8.9□□□□□ -0.98
MALAT1-210ENST00000617489 FAM174AQ8TBP5 190 aa8.9□□□□□ -0.98
MALAT1-210ENST00000617489 H3BM21 787 aa8.89□□□□□ -0.99
MALAT1-210ENST00000617489 PURBQ96QR8 312 aaKnown RBP8.89□□□□□ -0.99
MALAT1-210ENST00000617489 DIXDC1Q155Q3 683 aa8.88□□□□□ -0.99
MALAT1-210ENST00000617489 BARGINQ6ZT62 677 aa8.88□□□□□ -0.99
MALAT1-210ENST00000617489 MPNDQ8N594 471 aa8.88□□□□□ -0.99
MALAT1-210ENST00000617489 ADH1CP00326 375 aa8.87□□□□□ -0.99
MALAT1-210ENST00000617489 AGERQ15109 404 aa8.87□□□□□ -0.99
MALAT1-210ENST00000617489 LYPD8Q6UX82 237 aa8.87□□□□□ -0.99
MALAT1-210ENST00000617489 TBC1D2Q9BYX2 928 aa8.87□□□□□ -0.99
MALAT1-210ENST00000617489 TIMP2P16035 220 aa8.86□□□□□ -0.99
MALAT1-210ENST00000617489 AMHR2Q16671 573 aa8.86□□□□□ -0.99
MALAT1-210ENST00000617489 ERBB4Q15303 1308 aa8.85□□□□□ -0.99
MALAT1-210ENST00000617489 SOBPA7XYQ1 873 aa8.85□□□□□ -0.99
MALAT1-210ENST00000617489 FOXJ1Q92949 421 aa8.85□□□□□ -0.99
MALAT1-210ENST00000617489 PCDHB15Q9Y5E8 787 aa8.85□□□□□ -0.99
MALAT1-210ENST00000617489 ZMYND10O75800 440 aa8.84□□□□□ -0.99
MALAT1-210ENST00000617489 RSBN1LQ6PCB5 846 aaPredicted RBP8.84□□□□□ -0.99
MALAT1-210ENST00000617489 MAN1A2O60476 641 aa8.83□□□□□ -1
MALAT1-210ENST00000617489 ZIC2O95409 532 aaPredicted RBP8.83□□□□□ -1
MALAT1-210ENST00000617489 GJA5P36382 358 aa8.83□□□□□ -1
MALAT1-210ENST00000617489 CSPP1Q1MSJ5 1256 aa8.83□□□□□ -1
MALAT1-210ENST00000617489 C6orf118Q5T5N4 469 aa8.83□□□□□ -1
MALAT1-210ENST00000617489 TSC1Q92574 1164 aa8.83□□□□□ -1
MALAT1-210ENST00000617489 ZBTB3Q9H5J0 574 aa8.83□□□□□ -1
MALAT1-210ENST00000617489 MAP10Q9P2G4 905 aa8.83□□□□□ -1
MALAT1-210ENST00000617489 CFAP99D6REC4 459 aa8.82□□□□□ -1
MALAT1-210ENST00000617489 HRCP23327 699 aa8.82□□□□□ -1
MALAT1-210ENST00000617489 ZC3H15Q8WU90 426 aaKnown RBP8.82□□□□□ -1
MALAT1-210ENST00000617489 UPP2O95045 317 aa8.81□□□□□ -1
MALAT1-210ENST00000617489 RIC3Q7Z5B4 369 aa8.81□□□□□ -1
MALAT1-210ENST00000617489 CDK15Q96Q40 435 aa8.81□□□□□ -1
MALAT1-210ENST00000617489 ZFAND3Q9H8U3 227 aa8.81□□□□□ -1
MALAT1-210ENST00000617489 SPTLC1O15269 473 aa8.8□□□□□ -1
MALAT1-210ENST00000617489 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
MALAT1-210ENST00000617489 NR5A1Q13285 461 aa8.8□□□□□ -1
MALAT1-210ENST00000617489 BPHLQ86WA6 291 aaPredicted RBP8.8□□□□□ -1
MALAT1-210ENST00000617489 KLF16Q9BXK1 252 aaPredicted RBP8.8□□□□□ -1
MALAT1-210ENST00000617489 NUTM2BA6NNL0 878 aaPredicted RBP8.79□□□□□ -1
MALAT1-210ENST00000617489 NUTM2EB1AL46 878 aaPredicted RBP8.79□□□□□ -1
MALAT1-210ENST00000617489 BMP2P12643 396 aa8.79□□□□□ -1
MALAT1-210ENST00000617489 NUTM2DQ5VT03 806 aaPredicted RBP8.79□□□□□ -1
MALAT1-210ENST00000617489 NUTM2AQ8IVF1 878 aaPredicted RBP8.79□□□□□ -1
MALAT1-210ENST00000617489 CABLES1Q8TDN4 633 aa8.79□□□□□ -1
MALAT1-210ENST00000617489 ITPKCQ96DU7 683 aa8.79□□□□□ -1
MALAT1-210ENST00000617489 PRPF38BQ5VTL8 546 aaKnown RBP8.78□□□□□ -1
MALAT1-210ENST00000617489 PARP9Q8IXQ6 854 aa8.78□□□□□ -1
MALAT1-210ENST00000617489 F12P00748 615 aaPredicted RBP8.77□□□□□ -1.01
MALAT1-210ENST00000617489 NR3C2P08235 984 aa8.77□□□□□ -1.01
MALAT1-210ENST00000617489 PER1O15534 1290 aaPredicted RBP8.76□□□□□ -1.01
MALAT1-210ENST00000617489 GRM5P41594 1212 aa8.76□□□□□ -1.01
MALAT1-210ENST00000617489 ARMC2Q8NEN0 867 aa8.76□□□□□ -1.01
MALAT1-210ENST00000617489 TRIM66O15016 1216 aa8.75□□□□□ -1.01
MALAT1-210ENST00000617489 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
MALAT1-210ENST00000617489 AK7Q96M32 723 aa8.74□□□□□ -1.01
MALAT1-210ENST00000617489 PPFIA3O75145 1194 aa8.73□□□□□ -1.01
MALAT1-210ENST00000617489 VSIG8P0DPA2 414 aa8.73□□□□□ -1.01
MALAT1-210ENST00000617489 VASH1Q7L8A9 365 aaPredicted RBP8.73□□□□□ -1.01
MALAT1-210ENST00000617489 LINC00528Q8N1L1 170 aa8.73□□□□□ -1.01
MALAT1-210ENST00000617489 MAGEB6P1A0A0J9YX57 407 aa8.72□□□□□ -1.01
MALAT1-210ENST00000617489 FSHRP23945 695 aa8.72□□□□□ -1.01
MALAT1-210ENST00000617489 NBPF14Q5TI25 921 aa8.71□□□□□ -1.02
MALAT1-210ENST00000617489 MEIOBQ8N635 442 aa8.71□□□□□ -1.02
MALAT1-210ENST00000617489 CCDC180Q9P1Z9 1646 aa8.71□□□□□ -1.02
MALAT1-210ENST00000617489 QPCTQ16769 361 aa8.7□□□□□ -1.02
MALAT1-210ENST00000617489 HELBQ8NG08 1087 aaPredicted RBP8.7□□□□□ -1.02
MALAT1-210ENST00000617489 TSEN34Q9BSV6 310 aaKnown RBP8.7□□□□□ -1.02
MALAT1-210ENST00000617489 LIMD1Q9UGP4 676 aa8.7□□□□□ -1.02
MALAT1-210ENST00000617489 MYSM1Q5VVJ2 828 aa8.69□□□□□ -1.02
MALAT1-210ENST00000617489 CARD14Q9BXL6 1004 aa8.69□□□□□ -1.02
MALAT1-210ENST00000617489 EMILIN1Q9Y6C2 1016 aa8.69□□□□□ -1.02
MALAT1-210ENST00000617489 SOS2Q07890 1332 aaPredicted RBP8.69□□□□□ -1.02
MALAT1-210ENST00000617489 CCDC116Q8IYX3 515 aa8.68□□□□□ -1.02
MALAT1-210ENST00000617489 DNMT3LQ9UJW3 386 aa8.68□□□□□ -1.02
MALAT1-210ENST00000617489 FIGNL2A6NMB9 653 aa8.67□□□□□ -1.02
MALAT1-210ENST00000617489 LILRB3O75022 631 aa8.67□□□□□ -1.02
MALAT1-210ENST00000617489 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.67□□□□□ -1.02
MALAT1-210ENST00000617489 C1QTNF2Q9BXJ5 285 aa8.67□□□□□ -1.02
MALAT1-210ENST00000617489 MAP4K5Q9Y4K4 846 aa8.67□□□□□ -1.02
MALAT1-210ENST00000617489 RTL5Q5HYW3 569 aaPredicted RBP8.66□□□□□ -1.02
MALAT1-210ENST00000617489 SH3RF1Q7Z6J0 888 aa8.66□□□□□ -1.02
MALAT1-210ENST00000617489 TTLL8A6PVC2 850 aa8.65□□□□□ -1.02
MALAT1-210ENST00000617489 PDE4DQ08499 809 aa8.65□□□□□ -1.02
MALAT1-210ENST00000617489 TUSC1Q2TAM9 212 aa8.65□□□□□ -1.02
MALAT1-210ENST00000617489 SH3BP5LQ7L8J4 393 aa8.65□□□□□ -1.02
MALAT1-210ENST00000617489 TRMT44Q8IYL2 757 aaKnown RBP8.65□□□□□ -1.02
MALAT1-210ENST00000617489 PGPEP1Q9NXJ5 209 aa8.65□□□□□ -1.02
MALAT1-210ENST00000617489 CNTNAP3BQ96NU0 1288 aa8.64□□□□□ -1.03
MALAT1-210ENST00000617489 CNTNAP3Q9BZ76 1288 aa8.64□□□□□ -1.03
MALAT1-210ENST00000617489 PTSQ03393 145 aa8.63□□□□□ -1.03
MALAT1-210ENST00000617489 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.03
MALAT1-210ENST00000617489 POLR3EQ9NVU0 708 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms