RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 CLASRPQ8N2M8 674 aaKnown RBP18.62■□□□□ 0.57
PTPRT-210ENST00000617474 NKTRP30414 1462 aaKnown RBP18.62■□□□□ 0.57
PTPRT-210ENST00000617474 DCTN1Q14203 1278 aa18.62■□□□□ 0.57
PTPRT-210ENST00000617474 CDK19Q9BWU1 502 aa18.62■□□□□ 0.57
PTPRT-210ENST00000617474 IL1RAPL2Q9NP60 686 aa18.62■□□□□ 0.57
PTPRT-210ENST00000617474 CEBPZQ03701 1054 aaKnown RBP18.62■□□□□ 0.57
PTPRT-210ENST00000617474 TXNDC2Q86VQ3 553 aa18.62■□□□□ 0.57
PTPRT-210ENST00000617474 UPF3BQ9BZI7 483 aaKnown RBP18.61■□□□□ 0.57
PTPRT-210ENST00000617474 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.61■□□□□ 0.57
PTPRT-210ENST00000617474 APPP05067 770 aa18.61■□□□□ 0.57
PTPRT-210ENST00000617474 SSFA2P28290 1259 aa18.61■□□□□ 0.57
PTPRT-210ENST00000617474 CIZ1Q9ULV3 898 aaPredicted RBP18.61■□□□□ 0.57
PTPRT-210ENST00000617474 EXOC6BQ9Y2D4 811 aa18.61■□□□□ 0.57
PTPRT-210ENST00000617474 ARHGEF11O15085 1522 aa18.61■□□□□ 0.57
PTPRT-210ENST00000617474 SYCE3A1L190 88 aa18.61■□□□□ 0.57
PTPRT-210ENST00000617474 SMARCA5O60264 1052 aaPredicted RBP18.61■□□□□ 0.57
PTPRT-210ENST00000617474 GNAI2P04899 355 aa18.61■□□□□ 0.57
PTPRT-210ENST00000617474 CT47B1P0C2W7 299 aaPredicted RBP18.61■□□□□ 0.57
PTPRT-210ENST00000617474 CCDC73Q6ZRK6 1079 aa18.61■□□□□ 0.57
PTPRT-210ENST00000617474 TRIM27P14373 513 aa18.61■□□□□ 0.57
PTPRT-210ENST00000617474 NEUROD6Q96NK8 337 aa18.61■□□□□ 0.57
PTPRT-210ENST00000617474 FMNL2Q96PY5 1086 aa18.61■□□□□ 0.57
PTPRT-210ENST00000617474 TPM3P06753 285 aa18.6■□□□□ 0.57
PTPRT-210ENST00000617474 TNPO1Q92973 898 aaKnown RBP18.6■□□□□ 0.57
PTPRT-210ENST00000617474 KDM4AO75164 1064 aa18.6■□□□□ 0.57
PTPRT-210ENST00000617474 PKNOX2Q96KN3 472 aa18.6■□□□□ 0.57
PTPRT-210ENST00000617474 PCDHB15Q9Y5E8 787 aa18.6■□□□□ 0.57
PTPRT-210ENST00000617474 HSP90AB4PQ58FF6 505 aa18.59■□□□□ 0.57
PTPRT-210ENST00000617474 CNTROBQ8N137 903 aa18.59■□□□□ 0.57
PTPRT-210ENST00000617474 SDF4Q9BRK5 362 aa18.59■□□□□ 0.57
PTPRT-210ENST00000617474 FSD1Q9BTV5 496 aa18.59■□□□□ 0.57
PTPRT-210ENST00000617474 GOLGA6L1Q8N7Z2 621 aa18.59■□□□□ 0.57
PTPRT-210ENST00000617474 MIS18AQ9NYP9 233 aa18.59■□□□□ 0.57
PTPRT-210ENST00000617474 TPD52L1Q16890 204 aaPredicted RBP18.59■□□□□ 0.57
PTPRT-210ENST00000617474 MCM2P49736 904 aa18.58■□□□□ 0.57
PTPRT-210ENST00000617474 CWC22Q9HCG8 908 aaKnown RBP18.58■□□□□ 0.57
PTPRT-210ENST00000617474 PANK2Q9BZ23 570 aa18.58■□□□□ 0.56
PTPRT-210ENST00000617474 TTC5Q8N0Z6 440 aa18.58■□□□□ 0.56
PTPRT-210ENST00000617474 C8orf34Q49A92 452 aa18.57■□□□□ 0.56
PTPRT-210ENST00000617474 PLB1Q6P1J6 1458 aa18.57■□□□□ 0.56
PTPRT-210ENST00000617474 CAMSAP2Q08AD1 1489 aa18.57■□□□□ 0.56
PTPRT-210ENST00000617474 UQCRHLA0A096LP55 91 aa18.57■□□□□ 0.56
PTPRT-210ENST00000617474 CLSTN1O94985 981 aa18.57■□□□□ 0.56
PTPRT-210ENST00000617474 DDX58O95786 925 aaKnown RBP18.57■□□□□ 0.56
PTPRT-210ENST00000617474 UQCRHP07919 91 aa18.57■□□□□ 0.56
PTPRT-210ENST00000617474 TNNQ9UQP3 1299 aa18.57■□□□□ 0.56
PTPRT-210ENST00000617474 CCDC30Q5VVM6 783 aa18.57■□□□□ 0.56
PTPRT-210ENST00000617474 STK3Q13188 491 aa18.57■□□□□ 0.56
PTPRT-210ENST00000617474 CPLX2Q6PUV4 134 aaKnown RBP18.57■□□□□ 0.56
PTPRT-210ENST00000617474 RIC3Q7Z5B4 369 aa18.57■□□□□ 0.56
PTPRT-210ENST00000617474 ZSCAN30Q86W11 494 aa18.57■□□□□ 0.56
PTPRT-210ENST00000617474 LRRCC1Q9C099 1032 aa18.57■□□□□ 0.56
PTPRT-210ENST00000617474 MAP7D2Q96T17 732 aa18.56■□□□□ 0.56
PTPRT-210ENST00000617474 TBC1D32Q96NH3 1257 aa18.56■□□□□ 0.56
PTPRT-210ENST00000617474 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
PTPRT-210ENST00000617474 PDE4CQ08493 712 aa18.55■□□□□ 0.56
PTPRT-210ENST00000617474 HDGFL1Q5TGJ6 251 aa18.55■□□□□ 0.56
PTPRT-210ENST00000617474 ADGRF5Q8IZF2 1346 aa18.55■□□□□ 0.56
PTPRT-210ENST00000617474 ABCA10Q8WWZ4 1543 aa18.55■□□□□ 0.56
PTPRT-210ENST00000617474 PSME1Q06323 249 aa18.54■□□□□ 0.56
PTPRT-210ENST00000617474 NOC3LQ8WTT2 800 aaKnown RBP18.54■□□□□ 0.56
PTPRT-210ENST00000617474 XPCQ01831 940 aaPredicted RBP18.54■□□□□ 0.56
PTPRT-210ENST00000617474 GPRASP1Q5JY77 1395 aa18.54■□□□□ 0.56
PTPRT-210ENST00000617474 FCHSD2O94868 740 aa18.53■□□□□ 0.56
PTPRT-210ENST00000617474 SEC24BO95487 1268 aa18.53■□□□□ 0.56
PTPRT-210ENST00000617474 DDX54Q8TDD1 881 aaKnown RBP18.53■□□□□ 0.56
PTPRT-210ENST00000617474 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
PTPRT-210ENST00000617474 WDR33Q9C0J8 1336 aaKnown RBP18.52■□□□□ 0.56
PTPRT-210ENST00000617474 NFE2L2Q16236 605 aa18.52■□□□□ 0.56
PTPRT-210ENST00000617474 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.56
PTPRT-210ENST00000617474 MCM10Q7L590 875 aa18.52■□□□□ 0.56
PTPRT-210ENST00000617474 DNAJC2Q99543 621 aaKnown RBP18.52■□□□□ 0.56
PTPRT-210ENST00000617474 SIL1Q9H173 461 aa18.52■□□□□ 0.56
PTPRT-210ENST00000617474 RAPGEF3O95398 923 aa18.52■□□□□ 0.55
PTPRT-210ENST00000617474 AKAP17AQ02040 695 aaKnown RBP18.52■□□□□ 0.55
PTPRT-210ENST00000617474 TRIM29Q14134 588 aa18.52■□□□□ 0.55
PTPRT-210ENST00000617474 WASHC4Q2M389 1173 aa18.52■□□□□ 0.55
PTPRT-210ENST00000617474 SYNE3Q6ZMZ3 975 aa18.52■□□□□ 0.55
PTPRT-210ENST00000617474 RRP9O43818 475 aaKnown RBP18.51■□□□□ 0.55
PTPRT-210ENST00000617474 CWC27Q6UX04 472 aaKnown RBP18.51■□□□□ 0.55
PTPRT-210ENST00000617474 FERMT3Q86UX7 667 aa18.51■□□□□ 0.55
PTPRT-210ENST00000617474 GDPD2Q9HCC8 539 aa18.51■□□□□ 0.55
PTPRT-210ENST00000617474 MRC2Q9UBG0 1479 aa18.51■□□□□ 0.55
PTPRT-210ENST00000617474 XRCC6P12956 609 aaKnown RBP eCLIP18.51■□□□□ 0.55
PTPRT-210ENST00000617474 FBLN1P23142 703 aa18.51■□□□□ 0.55
PTPRT-210ENST00000617474 HMGN5P82970 282 aaKnown RBP18.51■□□□□ 0.55
PTPRT-210ENST00000617474 TRDNQ13061 729 aa18.51■□□□□ 0.55
PTPRT-210ENST00000617474 MTERF4Q7Z6M4 381 aaKnown RBP18.5■□□□□ 0.55
PTPRT-210ENST00000617474 MNS1Q8NEH6 495 aa18.5■□□□□ 0.55
PTPRT-210ENST00000617474 GTF2E1P29083 439 aaPredicted RBP18.5■□□□□ 0.55
PTPRT-210ENST00000617474 GAS2L2Q8NHY3 880 aa18.5■□□□□ 0.55
PTPRT-210ENST00000617474 LARP6Q9BRS8 491 aaKnown RBP18.5■□□□□ 0.55
PTPRT-210ENST00000617474 SRGAP3O43295 1099 aa18.5■□□□□ 0.55
PTPRT-210ENST00000617474 NUTM1Q86Y26 1132 aa18.5■□□□□ 0.55
PTPRT-210ENST00000617474 PSMA5P28066 241 aa18.49■□□□□ 0.55
PTPRT-210ENST00000617474 RPAP2Q8IXW5 612 aaPredicted RBP18.49■□□□□ 0.55
PTPRT-210ENST00000617474 A0A0U1RQG5 324 aaPredicted RBP18.49■□□□□ 0.55
PTPRT-210ENST00000617474 F6X3S4 739 aa18.49■□□□□ 0.55
PTPRT-210ENST00000617474 ATP2B1P20020 1258 aa18.49■□□□□ 0.55
PTPRT-210ENST00000617474 CCT4P50991 539 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms