RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 NPHP3Q7Z494 1330 aa22.8■■□□□ 1.24
SPTSSB-204ENST00000617024 TRPC5Q9UL62 973 aaPredicted RBP22.79■■□□□ 1.24
SPTSSB-204ENST00000617024 PPIP5K1Q6PFW1 1433 aa22.79■■□□□ 1.24
SPTSSB-204ENST00000617024 POLR3GLQ9BT43 218 aa22.78■■□□□ 1.24
SPTSSB-204ENST00000617024 ACEP12821 1306 aa22.78■■□□□ 1.24
SPTSSB-204ENST00000617024 ITSN1Q15811 1721 aa22.77■■□□□ 1.24
SPTSSB-204ENST00000617024 MARF1Q9Y4F3 1742 aaKnown RBP22.77■■□□□ 1.24
SPTSSB-204ENST00000617024 KRT28Q7Z3Y7 464 aa22.77■■□□□ 1.24
SPTSSB-204ENST00000617024 C11orf95C9JLR9 678 aaPredicted RBP22.76■■□□□ 1.23
SPTSSB-204ENST00000617024 SLC12A5Q9H2X9 1139 aa22.76■■□□□ 1.23
SPTSSB-204ENST00000617024 KIF1AQ12756 1690 aa22.76■■□□□ 1.23
SPTSSB-204ENST00000617024 ZNF692Q9BU19 519 aaPredicted RBP22.75■■□□□ 1.23
SPTSSB-204ENST00000617024 BCL9LQ86UU0 1499 aa22.74■■□□□ 1.23
SPTSSB-204ENST00000617024 XPCQ01831 940 aaPredicted RBP22.74■■□□□ 1.23
SPTSSB-204ENST00000617024 POLR3AO14802 1390 aaPredicted RBP22.73■■□□□ 1.23
SPTSSB-204ENST00000617024 TOPAZ1Q8N9V7 1692 aa22.72■■□□□ 1.23
SPTSSB-204ENST00000617024 TERF2IPQ9NYB0 399 aa22.72■■□□□ 1.23
SPTSSB-204ENST00000617024 ZRANB1Q9UGI0 708 aa22.72■■□□□ 1.23
SPTSSB-204ENST00000617024 NINLQ9Y2I6 1382 aa22.72■■□□□ 1.23
SPTSSB-204ENST00000617024 HDGFL2Q7Z4V5 671 aaPredicted RBP22.71■■□□□ 1.23
SPTSSB-204ENST00000617024 PXDNQ92626 1479 aa22.71■■□□□ 1.23
SPTSSB-204ENST00000617024 KIF7Q2M1P5 1343 aa22.68■■□□□ 1.22
SPTSSB-204ENST00000617024 PAK3O75914 559 aaPredicted RBP22.68■■□□□ 1.22
SPTSSB-204ENST00000617024 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.67■■□□□ 1.22
SPTSSB-204ENST00000617024 CPSF1Q10570 1443 aaKnown RBP22.65■■□□□ 1.22
SPTSSB-204ENST00000617024 SBNO1A3KN83 1393 aa22.65■■□□□ 1.22
SPTSSB-204ENST00000617024 KTN1Q86UP2 1357 aaKnown RBP22.65■■□□□ 1.22
SPTSSB-204ENST00000617024 GLI3P10071 1580 aa22.65■■□□□ 1.22
SPTSSB-204ENST00000617024 LMOD2Q6P5Q4 547 aa22.65■■□□□ 1.22
SPTSSB-204ENST00000617024 BRWD3Q6RI45 1802 aa22.65■■□□□ 1.22
SPTSSB-204ENST00000617024 BRD4O60885 1362 aaPredicted RBP22.64■■□□□ 1.22
SPTSSB-204ENST00000617024 SPATA31A3Q5VYP0 1347 aa22.64■■□□□ 1.22
SPTSSB-204ENST00000617024 GJD4Q96KN9 370 aaPredicted RBP22.64■■□□□ 1.21
SPTSSB-204ENST00000617024 CCDC7Q96M83 1385 aa22.63■■□□□ 1.21
SPTSSB-204ENST00000617024 WASHC2AQ641Q2 1341 aa22.63■■□□□ 1.21
SPTSSB-204ENST00000617024 CCDC125Q86Z20 511 aa22.63■■□□□ 1.21
SPTSSB-204ENST00000617024 USP6P35125 1406 aa22.62■■□□□ 1.21
SPTSSB-204ENST00000617024 ANKRD36BQ8N2N9 1353 aa22.62■■□□□ 1.21
SPTSSB-204ENST00000617024 CD163L1Q9NR16 1453 aa22.61■■□□□ 1.21
SPTSSB-204ENST00000617024 A0A1W2PP64 1363 aa22.61■■□□□ 1.21
SPTSSB-204ENST00000617024 TTC21BQ7Z4L5 1316 aa22.6■■□□□ 1.21
SPTSSB-204ENST00000617024 PANK3Q9H999 370 aa22.6■■□□□ 1.21
SPTSSB-204ENST00000617024 AKAP12Q02952 1782 aa22.59■■□□□ 1.21
SPTSSB-204ENST00000617024 SLIT2O94813 1529 aa22.59■■□□□ 1.21
SPTSSB-204ENST00000617024 ABTB2Q8N961 1025 aa22.59■■□□□ 1.21
SPTSSB-204ENST00000617024 TNS3Q68CZ2 1445 aa22.58■■□□□ 1.21
SPTSSB-204ENST00000617024 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.58■■□□□ 1.21
SPTSSB-204ENST00000617024 ARHGEF10O15013 1369 aa22.58■■□□□ 1.21
SPTSSB-204ENST00000617024 TTC21AQ8NDW8 1320 aa22.57■■□□□ 1.2
SPTSSB-204ENST00000617024 TRPM3Q9HCF6 1732 aaPredicted RBP22.57■■□□□ 1.2
SPTSSB-204ENST00000617024 BLMP54132 1417 aaPredicted RBP22.57■■□□□ 1.2
SPTSSB-204ENST00000617024 SSH2Q76I76 1423 aa22.57■■□□□ 1.2
SPTSSB-204ENST00000617024 EDC4Q6P2E9 1401 aaKnown RBP22.56■■□□□ 1.2
SPTSSB-204ENST00000617024 MYOM1P52179 1685 aa22.55■■□□□ 1.2
SPTSSB-204ENST00000617024 NUTM2GQ5VZR2 741 aa22.55■■□□□ 1.2
SPTSSB-204ENST00000617024 DEFB132Q7Z7B7 95 aa22.55■■□□□ 1.2
SPTSSB-204ENST00000617024 CARD14Q9BXL6 1004 aa22.55■■□□□ 1.2
SPTSSB-204ENST00000617024 ZNF316A6NFI3 1004 aaPredicted RBP22.54■■□□□ 1.2
SPTSSB-204ENST00000617024 NLRP13Q86W25 1043 aa22.54■■□□□ 1.2
SPTSSB-204ENST00000617024 UNC5CLQ8IV45 518 aa22.54■■□□□ 1.2
SPTSSB-204ENST00000617024 MON2Q7Z3U7 1717 aa22.54■■□□□ 1.2
SPTSSB-204ENST00000617024 PLEKHG5O94827 1062 aa22.53■■□□□ 1.2
SPTSSB-204ENST00000617024 NLRP6P59044 892 aa22.53■■□□□ 1.2
SPTSSB-204ENST00000617024 LRP5O75197 1615 aa22.51■■□□□ 1.19
SPTSSB-204ENST00000617024 ALS2Q96Q42 1657 aa22.51■■□□□ 1.19
SPTSSB-204ENST00000617024 HAP1P54257 671 aaPredicted RBP22.5■■□□□ 1.19
SPTSSB-204ENST00000617024 NME9Q86XW9 330 aa22.5■■□□□ 1.19
SPTSSB-204ENST00000617024 CABLES1Q8TDN4 633 aa22.5■■□□□ 1.19
SPTSSB-204ENST00000617024 PLCH1Q4KWH8 1693 aa22.49■■□□□ 1.19
SPTSSB-204ENST00000617024 KNSTRNQ9Y448 316 aa22.49■■□□□ 1.19
SPTSSB-204ENST00000617024 NSD3Q9BZ95 1437 aa22.48■■□□□ 1.19
SPTSSB-204ENST00000617024 FYB1O15117 783 aa22.48■■□□□ 1.19
SPTSSB-204ENST00000617024 ABCA3Q99758 1704 aa22.48■■□□□ 1.19
SPTSSB-204ENST00000617024 CGNL1Q0VF96 1302 aa22.47■■□□□ 1.19
SPTSSB-204ENST00000617024 NRKQ7Z2Y5 1582 aa22.46■■□□□ 1.19
SPTSSB-204ENST00000617024 SEPT12Q8IYM1 358 aa22.46■■□□□ 1.19
SPTSSB-204ENST00000617024 NWD2Q9ULI1 1742 aa22.45■■□□□ 1.19
SPTSSB-204ENST00000617024 COG3Q96JB2 828 aa22.45■■□□□ 1.18
SPTSSB-204ENST00000617024 USP31Q70CQ4 1352 aa22.45■■□□□ 1.18
SPTSSB-204ENST00000617024 PER1O15534 1290 aaPredicted RBP22.44■■□□□ 1.18
SPTSSB-204ENST00000617024 DDX10Q13206 875 aaKnown RBP22.44■■□□□ 1.18
SPTSSB-204ENST00000617024 GGNBP2Q9H3C7 697 aa22.44■■□□□ 1.18
SPTSSB-204ENST00000617024 USP19O94966 1318 aa22.43■■□□□ 1.18
SPTSSB-204ENST00000617024 GCP02774 474 aa22.43■■□□□ 1.18
SPTSSB-204ENST00000617024 PIK3C2AO00443 1686 aa22.42■■□□□ 1.18
SPTSSB-204ENST00000617024 VPS72Q15906 364 aa22.42■■□□□ 1.18
SPTSSB-204ENST00000617024 KCNH5Q8NCM2 988 aa22.42■■□□□ 1.18
SPTSSB-204ENST00000617024 ONECUT3O60422 494 aaPredicted RBP22.41■■□□□ 1.18
SPTSSB-204ENST00000617024 NRAPQ86VF7 1730 aa22.39■■□□□ 1.17
SPTSSB-204ENST00000617024 SOX12O15370 315 aa22.38■■□□□ 1.17
SPTSSB-204ENST00000617024 ZC3H6P61129 1189 aaKnown RBP22.38■■□□□ 1.17
SPTSSB-204ENST00000617024 SF3B2Q13435 895 aaKnown RBP22.38■■□□□ 1.17
SPTSSB-204ENST00000617024 PSDA5PKW4 1024 aaPredicted RBP22.37■■□□□ 1.17
SPTSSB-204ENST00000617024 AMER1Q5JTC6 1135 aaPredicted RBP22.37■■□□□ 1.17
SPTSSB-204ENST00000617024 KRT27Q7Z3Y8 459 aa22.37■■□□□ 1.17
SPTSSB-204ENST00000617024 OVOS2A0A0J9YW53 1432 aa22.36■■□□□ 1.17
SPTSSB-204ENST00000617024 OVOS2Q6IE36 1432 aa22.36■■□□□ 1.17
SPTSSB-204ENST00000617024 KIF20BQ96Q89 1820 aa22.35■■□□□ 1.17
SPTSSB-204ENST00000617024 NSD2O96028 1365 aa22.35■■□□□ 1.17
SPTSSB-204ENST00000617024 FAM83GA6ND36 823 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms