RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 FER1L4A9Z1Z3 1794 aa20.35■□□□□ 0.85
SEMA3B-212ENST00000616701 NBR1Q14596 966 aa20.35■□□□□ 0.85
SEMA3B-212ENST00000616701 E9PSI1 815 aa20.34■□□□□ 0.85
SEMA3B-212ENST00000616701 TRMT2AQ8IZ69 625 aaKnown RBP20.34■□□□□ 0.85
SEMA3B-212ENST00000616701 PRR36Q9H6K5 1346 aa20.34■□□□□ 0.85
SEMA3B-212ENST00000616701 BCAR3O75815 825 aa20.33■□□□□ 0.84
SEMA3B-212ENST00000616701 PLEKHG1Q9ULL1 1385 aa20.33■□□□□ 0.84
SEMA3B-212ENST00000616701 CCDC61Q9Y6R9 512 aa20.32■□□□□ 0.84
SEMA3B-212ENST00000616701 FAM135BQ49AJ0 1406 aa20.31■□□□□ 0.84
SEMA3B-212ENST00000616701 PTPRUQ92729 1446 aa20.31■□□□□ 0.84
SEMA3B-212ENST00000616701 AMOTL2Q9Y2J4 779 aa20.31■□□□□ 0.84
SEMA3B-212ENST00000616701 TECPR2O15040 1411 aa20.3■□□□□ 0.84
SEMA3B-212ENST00000616701 ATP7BP35670 1465 aa20.3■□□□□ 0.84
SEMA3B-212ENST00000616701 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
SEMA3B-212ENST00000616701 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
SEMA3B-212ENST00000616701 KIF20BQ96Q89 1820 aa20.29■□□□□ 0.84
SEMA3B-212ENST00000616701 DIAPH1O60610 1272 aaKnown RBP20.28■□□□□ 0.84
SEMA3B-212ENST00000616701 POLKQ9UBT6 870 aa20.28■□□□□ 0.84
SEMA3B-212ENST00000616701 IQSEC2Q5JU85 1478 aa20.28■□□□□ 0.84
SEMA3B-212ENST00000616701 CPS1P31327 1500 aa20.28■□□□□ 0.84
SEMA3B-212ENST00000616701 THEMISQ8N1K5 641 aaPredicted RBP20.28■□□□□ 0.84
SEMA3B-212ENST00000616701 SIRT1Q96EB6 747 aa20.28■□□□□ 0.84
SEMA3B-212ENST00000616701 FANCIQ9NVI1 1328 aa20.27■□□□□ 0.84
SEMA3B-212ENST00000616701 ANKRD26Q9UPS8 1709 aa20.27■□□□□ 0.84
SEMA3B-212ENST00000616701 KNDC1Q76NI1 1749 aa20.27■□□□□ 0.84
SEMA3B-212ENST00000616701 CPSF1Q10570 1443 aaKnown RBP20.27■□□□□ 0.84
SEMA3B-212ENST00000616701 COL3A1P02461 1466 aaPredicted RBP20.27■□□□□ 0.84
SEMA3B-212ENST00000616701 MED14O60244 1454 aa20.26■□□□□ 0.83
SEMA3B-212ENST00000616701 RRS1Q15050 365 aaKnown RBP20.26■□□□□ 0.83
SEMA3B-212ENST00000616701 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.26■□□□□ 0.83
SEMA3B-212ENST00000616701 NGEFQ8N5V2 710 aa20.25■□□□□ 0.83
SEMA3B-212ENST00000616701 SKAP1Q86WV1 359 aa20.25■□□□□ 0.83
SEMA3B-212ENST00000616701 PLEKHF1Q96S99 279 aa20.25■□□□□ 0.83
SEMA3B-212ENST00000616701 EDC4Q6P2E9 1401 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-212ENST00000616701 HMOX1P09601 288 aa20.24■□□□□ 0.83
SEMA3B-212ENST00000616701 PMFBP1Q8TBY8 1022 aa20.24■□□□□ 0.83
SEMA3B-212ENST00000616701 MAPK8IP3Q9UPT6 1336 aa20.24■□□□□ 0.83
SEMA3B-212ENST00000616701 SOX12O15370 315 aa20.23■□□□□ 0.83
SEMA3B-212ENST00000616701 COG3Q96JB2 828 aa20.23■□□□□ 0.83
SEMA3B-212ENST00000616701 BCL2L13Q9BXK5 485 aa20.23■□□□□ 0.83
SEMA3B-212ENST00000616701 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
SEMA3B-212ENST00000616701 ACEP12821 1306 aa20.22■□□□□ 0.83
SEMA3B-212ENST00000616701 TMPOP42166 694 aaKnown RBP20.22■□□□□ 0.83
SEMA3B-212ENST00000616701 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.22■□□□□ 0.83
SEMA3B-212ENST00000616701 ARHGAP23Q9P227 1491 aa20.21■□□□□ 0.83
SEMA3B-212ENST00000616701 TSR2Q969E8 191 aaKnown RBP20.21■□□□□ 0.83
SEMA3B-212ENST00000616701 RBM33Q96EV2 1170 aaKnown RBP20.21■□□□□ 0.83
SEMA3B-212ENST00000616701 TBX22Q9Y458 520 aa20.21■□□□□ 0.83
SEMA3B-212ENST00000616701 CDC42BPGQ6DT37 1551 aa20.21■□□□□ 0.83
SEMA3B-212ENST00000616701 SLIT1O75093 1534 aa20.21■□□□□ 0.83
SEMA3B-212ENST00000616701 WDR63Q8IWG1 891 aa20.2■□□□□ 0.82
SEMA3B-212ENST00000616701 FRAT1Q92837 279 aaPredicted RBP20.2■□□□□ 0.82
SEMA3B-212ENST00000616701 MAP2P11137 1827 aaKnown RBP20.2■□□□□ 0.82
SEMA3B-212ENST00000616701 RIMS1Q86UR5 1692 aaKnown RBP20.2■□□□□ 0.82
SEMA3B-212ENST00000616701 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
SEMA3B-212ENST00000616701 PNPLA6Q8IY17 1366 aa20.19■□□□□ 0.82
SEMA3B-212ENST00000616701 PRKAR2BP31323 418 aa20.19■□□□□ 0.82
SEMA3B-212ENST00000616701 RIPK4P57078 832 aa20.19■□□□□ 0.82
SEMA3B-212ENST00000616701 TRIM35Q9UPQ4 493 aa20.19■□□□□ 0.82
SEMA3B-212ENST00000616701 KCNA6P17658 529 aa20.18■□□□□ 0.82
SEMA3B-212ENST00000616701 CCDC27Q2M243 656 aa20.18■□□□□ 0.82
SEMA3B-212ENST00000616701 ZNF692Q9BU19 519 aaPredicted RBP20.17■□□□□ 0.82
SEMA3B-212ENST00000616701 TTC21BQ7Z4L5 1316 aa20.16■□□□□ 0.82
SEMA3B-212ENST00000616701 PANK1Q8TE04 598 aa20.16■□□□□ 0.82
SEMA3B-212ENST00000616701 TNNQ9UQP3 1299 aa20.16■□□□□ 0.82
SEMA3B-212ENST00000616701 PHACTR3Q96KR7 559 aa20.15■□□□□ 0.82
SEMA3B-212ENST00000616701 ADGRB2O60241 1585 aa20.15■□□□□ 0.82
SEMA3B-212ENST00000616701 ITSN1Q15811 1721 aa20.15■□□□□ 0.82
SEMA3B-212ENST00000616701 MON2Q7Z3U7 1717 aa20.14■□□□□ 0.82
SEMA3B-212ENST00000616701 RARSP54136 660 aaKnown RBP20.14■□□□□ 0.82
SEMA3B-212ENST00000616701 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.82
SEMA3B-212ENST00000616701 MYH16Q9H6N6 1097 aa20.14■□□□□ 0.81
SEMA3B-212ENST00000616701 CEP170BQ9Y4F5 1589 aaPredicted RBP20.13■□□□□ 0.81
SEMA3B-212ENST00000616701 AKAP12Q02952 1782 aa20.13■□□□□ 0.81
SEMA3B-212ENST00000616701 IL13P35225 146 aa20.13■□□□□ 0.81
SEMA3B-212ENST00000616701 NGDNQ8NEJ9 315 aaKnown RBP20.13■□□□□ 0.81
SEMA3B-212ENST00000616701 COG6Q9Y2V7 657 aa20.13■□□□□ 0.81
SEMA3B-212ENST00000616701 PLEKHG3A1L390 1219 aa20.12■□□□□ 0.81
SEMA3B-212ENST00000616701 FCHSD2O94868 740 aa20.12■□□□□ 0.81
SEMA3B-212ENST00000616701 THUMPD2Q9BTF0 503 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-212ENST00000616701 LAS1LQ9Y4W2 734 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-212ENST00000616701 LRRC7Q96NW7 1537 aa20.12■□□□□ 0.81
SEMA3B-212ENST00000616701 EXOSC9Q06265 439 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-212ENST00000616701 CLUAP1Q96AJ1 413 aa20.11■□□□□ 0.81
SEMA3B-212ENST00000616701 NEFMP07197 916 aa20.1■□□□□ 0.81
SEMA3B-212ENST00000616701 USP6P35125 1406 aa20.09■□□□□ 0.81
SEMA3B-212ENST00000616701 NUTM2GQ5VZR2 741 aa20.09■□□□□ 0.81
SEMA3B-212ENST00000616701 ANKLE2Q86XL3 938 aa20.09■□□□□ 0.81
SEMA3B-212ENST00000616701 RGPD8O14715 1765 aaPredicted RBP20.08■□□□□ 0.81
SEMA3B-212ENST00000616701 PNNQ9H307 717 aaKnown RBP20.08■□□□□ 0.81
SEMA3B-212ENST00000616701 PTCH1Q13635 1447 aa20.08■□□□□ 0.8
SEMA3B-212ENST00000616701 AATKQ6ZMQ8 1374 aa20.08■□□□□ 0.8
SEMA3B-212ENST00000616701 DIP2AQ14689 1571 aa20.07■□□□□ 0.8
SEMA3B-212ENST00000616701 RLBP1P12271 317 aa20.07■□□□□ 0.8
SEMA3B-212ENST00000616701 AEBP1Q8IUX7 1158 aa20.07■□□□□ 0.8
SEMA3B-212ENST00000616701 TOPAZ1Q8N9V7 1692 aa20.06■□□□□ 0.8
SEMA3B-212ENST00000616701 HSP90AB2PQ58FF8 381 aa20.06■□□□□ 0.8
SEMA3B-212ENST00000616701 CDK12Q9NYV4 1490 aaPredicted RBP20.06■□□□□ 0.8
SEMA3B-212ENST00000616701 EIF4A2Q14240 407 aaKnown RBP20.04■□□□□ 0.8
SEMA3B-212ENST00000616701 KDM2BQ8NHM5 1336 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms