RNA–Protein interactions for RNA: ENST00000616646.4

DDX52-212, Transcript of DExD-box helicase 52, humanhuman

TSL 5

Gene DDX52, Length 2,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52-212ENST00000616646 ATF7IPQ6VMQ6 1270 aa10.44□□□□□ -0.74
DDX52-212ENST00000616646 AEBP1Q8IUX7 1158 aa10.44□□□□□ -0.74
DDX52-212ENST00000616646 PRDM10Q9NQV6 1147 aa10.44□□□□□ -0.74
DDX52-212ENST00000616646 CROCC2H7BZ55 1655 aa10.44□□□□□ -0.74
DDX52-212ENST00000616646 RTEL1-TNFRSF6BF6WH68 1400 aa10.44□□□□□ -0.74
DDX52-212ENST00000616646 SCAF11Q99590 1463 aaKnown RBP10.44□□□□□ -0.74
DDX52-212ENST00000616646 HMGB1P09429 215 aaKnown RBP10.44□□□□□ -0.74
DDX52-212ENST00000616646 HMOX1P09601 288 aa10.44□□□□□ -0.74
DDX52-212ENST00000616646 TSC1Q92574 1164 aa10.44□□□□□ -0.74
DDX52-212ENST00000616646 KIF2CQ99661 725 aa10.44□□□□□ -0.74
DDX52-212ENST00000616646 SLC24A3Q9HC58 644 aa10.44□□□□□ -0.74
DDX52-212ENST00000616646 SPAG9O60271 1321 aaKnown RBP10.43□□□□□ -0.74
DDX52-212ENST00000616646 SAMD9LQ8IVG5 1584 aa10.43□□□□□ -0.74
DDX52-212ENST00000616646 UGGT1Q9NYU2 1555 aa10.43□□□□□ -0.74
DDX52-212ENST00000616646 MRC2Q9UBG0 1479 aa10.43□□□□□ -0.74
DDX52-212ENST00000616646 FAM177BA6PVY3 158 aa10.43□□□□□ -0.74
DDX52-212ENST00000616646 OTUD7AQ8TE49 926 aaPredicted RBP10.43□□□□□ -0.74
DDX52-212ENST00000616646 RRP9O43818 475 aaKnown RBP10.42□□□□□ -0.74
DDX52-212ENST00000616646 TBC1D9Q6ZT07 1266 aa10.42□□□□□ -0.74
DDX52-212ENST00000616646 CHD1LQ86WJ1 897 aa10.42□□□□□ -0.74
DDX52-212ENST00000616646 TSPYL6Q8N831 410 aa10.42□□□□□ -0.74
DDX52-212ENST00000616646 CFAP53Q96M91 514 aa10.42□□□□□ -0.74
DDX52-212ENST00000616646 TRAPPC8Q9Y2L5 1435 aa10.42□□□□□ -0.74
DDX52-212ENST00000616646 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
DDX52-212ENST00000616646 GGT6Q6P531 493 aa10.42□□□□□ -0.74
DDX52-212ENST00000616646 TRIM35Q9UPQ4 493 aa10.42□□□□□ -0.74
DDX52-212ENST00000616646 TMPOP42166 694 aaKnown RBP10.41□□□□□ -0.74
DDX52-212ENST00000616646 GBP4Q96PP9 640 aa10.41□□□□□ -0.74
DDX52-212ENST00000616646 WDR63Q8IWG1 891 aa10.41□□□□□ -0.74
DDX52-212ENST00000616646 ZGPATQ8N5A5 531 aaKnown RBP10.41□□□□□ -0.74
DDX52-212ENST00000616646 PUS7Q96PZ0 661 aaKnown RBP10.41□□□□□ -0.74
DDX52-212ENST00000616646 MYCNP04198 464 aaPredicted RBP10.41□□□□□ -0.74
DDX52-212ENST00000616646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.41□□□□□ -0.74
DDX52-212ENST00000616646 ZBTB40Q9NUA8 1239 aa10.41□□□□□ -0.74
DDX52-212ENST00000616646 DDX19BQ9UMR2 479 aa10.41□□□□□ -0.74
DDX52-212ENST00000616646 ERVK-7P63135 1459 aa10.4□□□□□ -0.74
DDX52-212ENST00000616646 SMARCA5O60264 1052 aaPredicted RBP10.4□□□□□ -0.74
DDX52-212ENST00000616646 PRPF40AO75400 957 aaKnown RBP10.4□□□□□ -0.74
DDX52-212ENST00000616646 SRPK2P78362 688 aaKnown RBP10.4□□□□□ -0.74
DDX52-212ENST00000616646 RAB3GAP1Q15042 981 aa10.4□□□□□ -0.74
DDX52-212ENST00000616646 RSPH4AQ5TD94 716 aa10.4□□□□□ -0.74
DDX52-212ENST00000616646 NSFL1CQ9UNZ2 370 aaKnown RBP10.4□□□□□ -0.74
DDX52-212ENST00000616646 IFT140Q96RY7 1462 aa10.4□□□□□ -0.75
DDX52-212ENST00000616646 BAG4O95429 457 aaKnown RBP10.39□□□□□ -0.75
DDX52-212ENST00000616646 MSNP26038 577 aaKnown RBP10.39□□□□□ -0.75
DDX52-212ENST00000616646 EFCAB2Q5VUJ9 269 aa10.39□□□□□ -0.75
DDX52-212ENST00000616646 TSHZ3Q63HK5 1081 aa10.39□□□□□ -0.75
DDX52-212ENST00000616646 SMC5Q8IY18 1101 aa10.39□□□□□ -0.75
DDX52-212ENST00000616646 BCL11BQ9C0K0 894 aaPredicted RBP10.39□□□□□ -0.75
DDX52-212ENST00000616646 RBSNQ9H1K0 784 aa10.39□□□□□ -0.75
DDX52-212ENST00000616646 PRIM1P49642 420 aaKnown RBP10.39□□□□□ -0.75
DDX52-212ENST00000616646 NUCB1Q02818 461 aa10.39□□□□□ -0.75
DDX52-212ENST00000616646 DCTN1Q14203 1278 aa10.39□□□□□ -0.75
DDX52-212ENST00000616646 RGS22Q8NE09 1264 aa10.39□□□□□ -0.75
DDX52-212ENST00000616646 K7ELQ4 463 aaPredicted RBP10.38□□□□□ -0.75
DDX52-212ENST00000616646 SYNMO15061 1565 aa10.38□□□□□ -0.75
DDX52-212ENST00000616646 SYNJ2O15056 1496 aa10.38□□□□□ -0.75
DDX52-212ENST00000616646 POLR3AO14802 1390 aaPredicted RBP10.38□□□□□ -0.75
DDX52-212ENST00000616646 MINK1Q8N4C8 1332 aaPredicted RBP10.38□□□□□ -0.75
DDX52-212ENST00000616646 DDIT3P35638 169 aa10.38□□□□□ -0.75
DDX52-212ENST00000616646 KRT24Q2M2I5 525 aa10.38□□□□□ -0.75
DDX52-212ENST00000616646 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.38□□□□□ -0.75
DDX52-212ENST00000616646 ERCC6Q03468 1493 aa10.38□□□□□ -0.75
DDX52-212ENST00000616646 SIRT2Q8IXJ6 389 aa10.38□□□□□ -0.75
DDX52-212ENST00000616646 ZNF830Q96NB3 372 aaPredicted RBP10.38□□□□□ -0.75
DDX52-212ENST00000616646 HDAC1Q13547 482 aaPredicted RBP10.37□□□□□ -0.75
DDX52-212ENST00000616646 GDPD2Q9HCC8 539 aa10.37□□□□□ -0.75
DDX52-212ENST00000616646 ABCA8O94911 1581 aa10.37□□□□□ -0.75
DDX52-212ENST00000616646 ABCC2Q92887 1545 aa10.37□□□□□ -0.75
DDX52-212ENST00000616646 FAM83GA6ND36 823 aa10.37□□□□□ -0.75
DDX52-212ENST00000616646 C17orf53Q8N3J3 647 aaPredicted RBP10.37□□□□□ -0.75
DDX52-212ENST00000616646 ANP32BQ92688 251 aaKnown RBP10.37□□□□□ -0.75
DDX52-212ENST00000616646 PHACTR3Q96KR7 559 aa10.37□□□□□ -0.75
DDX52-212ENST00000616646 AK9Q5TCS8 1911 aa10.37□□□□□ -0.75
DDX52-212ENST00000616646 SYCE3A1L190 88 aa10.36□□□□□ -0.75
DDX52-212ENST00000616646 MYO5CQ9NQX4 1742 aa10.36□□□□□ -0.75
DDX52-212ENST00000616646 GSPT1P15170 499 aaKnown RBP10.35□□□□□ -0.75
DDX52-212ENST00000616646 PRKAR2BP31323 418 aa10.35□□□□□ -0.75
DDX52-212ENST00000616646 ZSCAN30Q86W11 494 aa10.35□□□□□ -0.75
DDX52-212ENST00000616646 NUP160Q12769 1436 aa10.35□□□□□ -0.75
DDX52-212ENST00000616646 ATP10AO60312 1499 aa10.35□□□□□ -0.75
DDX52-212ENST00000616646 CALD1Q05682 793 aaKnown RBP10.35□□□□□ -0.75
DDX52-212ENST00000616646 ZSCAN23Q3MJ62 389 aa10.35□□□□□ -0.75
DDX52-212ENST00000616646 LARP6Q9BRS8 491 aaKnown RBP10.35□□□□□ -0.75
DDX52-212ENST00000616646 ZHX1Q9UKY1 873 aaPredicted RBP10.35□□□□□ -0.75
DDX52-212ENST00000616646 A0A0U1RQG5 324 aaPredicted RBP10.35□□□□□ -0.75
DDX52-212ENST00000616646 NOS1P29475 1434 aa10.35□□□□□ -0.75
DDX52-212ENST00000616646 CD109Q6YHK3 1445 aa10.35□□□□□ -0.75
DDX52-212ENST00000616646 TTC37Q6PGP7 1564 aa10.34□□□□□ -0.75
DDX52-212ENST00000616646 PTPRTO14522 1441 aa10.34□□□□□ -0.75
DDX52-212ENST00000616646 SPDYE4A6NLX3 237 aa10.34□□□□□ -0.75
DDX52-212ENST00000616646 GOLGA6L22H0YM25 854 aa10.34□□□□□ -0.75
DDX52-212ENST00000616646 NINLQ9Y2I6 1382 aa10.34□□□□□ -0.75
DDX52-212ENST00000616646 SCAPERQ9BY12 1400 aa10.34□□□□□ -0.75
DDX52-212ENST00000616646 UQCRHLA0A096LP55 91 aa10.34□□□□□ -0.75
DDX52-212ENST00000616646 SOX12O15370 315 aa10.34□□□□□ -0.75
DDX52-212ENST00000616646 UQCRHP07919 91 aa10.34□□□□□ -0.75
DDX52-212ENST00000616646 CCDC82Q8N4S0 544 aa10.34□□□□□ -0.75
DDX52-212ENST00000616646 GPT2Q8TD30 523 aa10.33□□□□□ -0.76
DDX52-212ENST00000616646 PLEKHF1Q96S99 279 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms