RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 DTNBO60941 627 aa11.8□□□□□ -0.52
MCM3-207ENST00000616552 BAG4O95429 457 aaKnown RBP11.8□□□□□ -0.52
MCM3-207ENST00000616552 SMC5Q8IY18 1101 aa11.8□□□□□ -0.52
MCM3-207ENST00000616552 C16orf71Q8IYS4 520 aaPredicted RBP11.8□□□□□ -0.52
MCM3-207ENST00000616552 PDCL3Q9H2J4 239 aa11.8□□□□□ -0.52
MCM3-207ENST00000616552 MYOM1P52179 1685 aa11.8□□□□□ -0.52
MCM3-207ENST00000616552 ERVK-7P63135 1459 aa11.79□□□□□ -0.52
MCM3-207ENST00000616552 ZSCAN30Q86W11 494 aa11.79□□□□□ -0.52
MCM3-207ENST00000616552 ZGPATQ8N5A5 531 aaKnown RBP11.79□□□□□ -0.52
MCM3-207ENST00000616552 GGNBP2Q9H3C7 697 aa11.79□□□□□ -0.52
MCM3-207ENST00000616552 SLC24A1O60721 1099 aa11.79□□□□□ -0.52
MCM3-207ENST00000616552 CHD1LQ86WJ1 897 aa11.79□□□□□ -0.52
MCM3-207ENST00000616552 UGGT1Q9NYU2 1555 aa11.79□□□□□ -0.52
MCM3-207ENST00000616552 RBM25P49756 843 aaKnown RBP11.79□□□□□ -0.52
MCM3-207ENST00000616552 PHF23Q9BUL5 403 aaPredicted RBP11.79□□□□□ -0.52
MCM3-207ENST00000616552 ZBTB40Q9NUA8 1239 aa11.79□□□□□ -0.52
MCM3-207ENST00000616552 ARHGAP5Q13017 1502 aa11.78□□□□□ -0.52
MCM3-207ENST00000616552 DUOX2Q9NRD8 1548 aa11.78□□□□□ -0.52
MCM3-207ENST00000616552 PRPF40AO75400 957 aaKnown RBP11.78□□□□□ -0.52
MCM3-207ENST00000616552 K7ELQ4 463 aaPredicted RBP11.78□□□□□ -0.52
MCM3-207ENST00000616552 WDR63Q8IWG1 891 aa11.78□□□□□ -0.52
MCM3-207ENST00000616552 PRDM4Q9UKN5 801 aa11.78□□□□□ -0.52
MCM3-207ENST00000616552 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
MCM3-207ENST00000616552 UQCRHLA0A096LP55 91 aa11.77□□□□□ -0.52
MCM3-207ENST00000616552 UQCRHP07919 91 aa11.77□□□□□ -0.52
MCM3-207ENST00000616552 NUCB1Q02818 461 aa11.77□□□□□ -0.52
MCM3-207ENST00000616552 NOL8Q76FK4 1167 aaKnown RBP11.77□□□□□ -0.52
MCM3-207ENST00000616552 CABP2Q9NPB3 220 aa11.77□□□□□ -0.52
MCM3-207ENST00000616552 UHRF1BP1LA0JNW5 1464 aa11.77□□□□□ -0.52
MCM3-207ENST00000616552 SPHKAPQ2M3C7 1700 aa11.77□□□□□ -0.53
MCM3-207ENST00000616552 OFD1O75665 1012 aa11.77□□□□□ -0.53
MCM3-207ENST00000616552 OTUD7AQ8TE49 926 aaPredicted RBP11.77□□□□□ -0.53
MCM3-207ENST00000616552 POLR3AO14802 1390 aaPredicted RBP11.77□□□□□ -0.53
MCM3-207ENST00000616552 MADDQ8WXG6 1647 aa11.77□□□□□ -0.53
MCM3-207ENST00000616552 HDAC1Q13547 482 aaPredicted RBP11.77□□□□□ -0.53
MCM3-207ENST00000616552 ZSCAN23Q3MJ62 389 aa11.77□□□□□ -0.53
MCM3-207ENST00000616552 C17orf53Q8N3J3 647 aaPredicted RBP11.77□□□□□ -0.53
MCM3-207ENST00000616552 ZNF830Q96NB3 372 aaPredicted RBP11.77□□□□□ -0.53
MCM3-207ENST00000616552 DDX19BQ9UMR2 479 aa11.77□□□□□ -0.53
MCM3-207ENST00000616552 TPM2P07951 284 aa11.76□□□□□ -0.53
MCM3-207ENST00000616552 CCDC173Q0VFZ6 552 aa11.76□□□□□ -0.53
MCM3-207ENST00000616552 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
MCM3-207ENST00000616552 STAC3Q96MF2 364 aa11.76□□□□□ -0.53
MCM3-207ENST00000616552 NCOA3Q9Y6Q9 1424 aa11.76□□□□□ -0.53
MCM3-207ENST00000616552 ZCCHC11Q5TAX3 1644 aaKnown RBP11.76□□□□□ -0.53
MCM3-207ENST00000616552 SYCE3A1L190 88 aa11.75□□□□□ -0.53
MCM3-207ENST00000616552 KIF3BO15066 747 aa11.75□□□□□ -0.53
MCM3-207ENST00000616552 RSPH4AQ5TD94 716 aa11.75□□□□□ -0.53
MCM3-207ENST00000616552 SIRT2Q8IXJ6 389 aa11.75□□□□□ -0.53
MCM3-207ENST00000616552 TSPYL6Q8N831 410 aa11.75□□□□□ -0.53
MCM3-207ENST00000616552 ISY1Q9ULR0 285 aaKnown RBP11.75□□□□□ -0.53
MCM3-207ENST00000616552 CDC42BPBQ9Y5S2 1711 aa11.75□□□□□ -0.53
MCM3-207ENST00000616552 GPT2Q8TD30 523 aa11.75□□□□□ -0.53
MCM3-207ENST00000616552 TMPOP42166 694 aaKnown RBP11.75□□□□□ -0.53
MCM3-207ENST00000616552 SNX21Q969T3 373 aa11.75□□□□□ -0.53
MCM3-207ENST00000616552 PPP1R9BQ96SB3 815 aa11.75□□□□□ -0.53
MCM3-207ENST00000616552 CEP152O94986 1710 aa11.74□□□□□ -0.53
MCM3-207ENST00000616552 GSPT1P15170 499 aaKnown RBP11.74□□□□□ -0.53
MCM3-207ENST00000616552 ANP32BQ92688 251 aaKnown RBP11.74□□□□□ -0.53
MCM3-207ENST00000616552 PODXL2Q9NZ53 605 aa11.73□□□□□ -0.53
MCM3-207ENST00000616552 CD109Q6YHK3 1445 aa11.73□□□□□ -0.53
MCM3-207ENST00000616552 TRAPPC8Q9Y2L5 1435 aa11.73□□□□□ -0.53
MCM3-207ENST00000616552 MYO3AQ8NEV4 1616 aa11.73□□□□□ -0.53
MCM3-207ENST00000616552 SMARCA5O60264 1052 aaPredicted RBP11.73□□□□□ -0.53
MCM3-207ENST00000616552 CALD1Q05682 793 aaKnown RBP11.73□□□□□ -0.53
MCM3-207ENST00000616552 KLHL40Q2TBA0 621 aa11.73□□□□□ -0.53
MCM3-207ENST00000616552 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
MCM3-207ENST00000616552 GDPD2Q9HCC8 539 aa11.73□□□□□ -0.53
MCM3-207ENST00000616552 LMBRD1Q9NUN5 540 aa11.73□□□□□ -0.53
MCM3-207ENST00000616552 STK26Q9P289 416 aa11.73□□□□□ -0.53
MCM3-207ENST00000616552 TMEM63CQ9P1W3 806 aa11.72□□□□□ -0.53
MCM3-207ENST00000616552 TTC37Q6PGP7 1564 aa11.72□□□□□ -0.53
MCM3-207ENST00000616552 USP32Q8NFA0 1604 aa11.72□□□□□ -0.53
MCM3-207ENST00000616552 ASXL2Q76L83 1435 aa11.72□□□□□ -0.53
MCM3-207ENST00000616552 IQSEC2Q5JU85 1478 aa11.72□□□□□ -0.53
MCM3-207ENST00000616552 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
MCM3-207ENST00000616552 CFAP53Q96M91 514 aa11.72□□□□□ -0.53
MCM3-207ENST00000616552 IGSF3O75054 1194 aa11.71□□□□□ -0.53
MCM3-207ENST00000616552 HMOX1P09601 288 aa11.71□□□□□ -0.53
MCM3-207ENST00000616552 SKOR2Q2VWA4 1001 aaPredicted RBP11.71□□□□□ -0.53
MCM3-207ENST00000616552 TSHZ3Q63HK5 1081 aa11.71□□□□□ -0.53
MCM3-207ENST00000616552 GOLGA6L22H0YM25 854 aa11.71□□□□□ -0.54
MCM3-207ENST00000616552 ZDHHC9Q9Y397 364 aa11.71□□□□□ -0.54
MCM3-207ENST00000616552 PPIP5K1Q6PFW1 1433 aa11.71□□□□□ -0.54
MCM3-207ENST00000616552 KDM5AP29375 1690 aaKnown RBP11.7□□□□□ -0.54
MCM3-207ENST00000616552 PLEKHF1Q96S99 279 aa11.7□□□□□ -0.54
MCM3-207ENST00000616552 PTPRTO14522 1441 aa11.7□□□□□ -0.54
MCM3-207ENST00000616552 BMP2KLQ5H9B9 411 aa11.7□□□□□ -0.54
MCM3-207ENST00000616552 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
MCM3-207ENST00000616552 ZBTB7BO15156 539 aaPredicted RBP11.69□□□□□ -0.54
MCM3-207ENST00000616552 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.69□□□□□ -0.54
MCM3-207ENST00000616552 KANK1Q14678 1352 aa11.69□□□□□ -0.54
MCM3-207ENST00000616552 SPAG9O60271 1321 aaKnown RBP11.69□□□□□ -0.54
MCM3-207ENST00000616552 CIZ1Q9ULV3 898 aaPredicted RBP11.69□□□□□ -0.54
MCM3-207ENST00000616552 PHACTR3Q96KR7 559 aa11.68□□□□□ -0.54
MCM3-207ENST00000616552 NOL7Q9UMY1 257 aaKnown RBP11.68□□□□□ -0.54
MCM3-207ENST00000616552 DCTN1Q14203 1278 aa11.68□□□□□ -0.54
MCM3-207ENST00000616552 KRT24Q2M2I5 525 aa11.68□□□□□ -0.54
MCM3-207ENST00000616552 CCDC27Q2M243 656 aa11.67□□□□□ -0.54
MCM3-207ENST00000616552 ZNF518AQ6AHZ1 1483 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms