RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 PTPRMP28827 1452 aa17.83■□□□□ 0.45
CACNA1C-231ENST00000616390 IQSEC2Q5JU85 1478 aa17.83■□□□□ 0.45
CACNA1C-231ENST00000616390 NEFMP07197 916 aa17.83■□□□□ 0.45
CACNA1C-231ENST00000616390 NSD2O96028 1365 aa17.83■□□□□ 0.44
CACNA1C-231ENST00000616390 ABCC11Q96J66 1382 aa17.83■□□□□ 0.44
CACNA1C-231ENST00000616390 TMPOP42166 694 aaKnown RBP17.82■□□□□ 0.44
CACNA1C-231ENST00000616390 EXOSC9Q06265 439 aaKnown RBP17.82■□□□□ 0.44
CACNA1C-231ENST00000616390 PHF23Q9BUL5 403 aaPredicted RBP17.82■□□□□ 0.44
CACNA1C-231ENST00000616390 PCDHB15Q9Y5E8 787 aa17.82■□□□□ 0.44
CACNA1C-231ENST00000616390 ATAD2Q6PL18 1390 aa17.82■□□□□ 0.44
CACNA1C-231ENST00000616390 RIPK4P57078 832 aa17.81■□□□□ 0.44
CACNA1C-231ENST00000616390 USP32Q8NFA0 1604 aa17.81■□□□□ 0.44
CACNA1C-231ENST00000616390 DIAPH1O60610 1272 aaKnown RBP17.81■□□□□ 0.44
CACNA1C-231ENST00000616390 FTSJ3Q8IY81 847 aaKnown RBP17.81■□□□□ 0.44
CACNA1C-231ENST00000616390 DDRGK1Q96HY6 314 aa17.81■□□□□ 0.44
CACNA1C-231ENST00000616390 ZFYVE9O95405 1425 aa17.8■□□□□ 0.44
CACNA1C-231ENST00000616390 ESF1Q9H501 851 aaKnown RBP17.8■□□□□ 0.44
CACNA1C-231ENST00000616390 SMC4Q9NTJ3 1288 aa17.8■□□□□ 0.44
CACNA1C-231ENST00000616390 ALKQ9UM73 1620 aa17.8■□□□□ 0.44
CACNA1C-231ENST00000616390 CCDC27Q2M243 656 aa17.8■□□□□ 0.44
CACNA1C-231ENST00000616390 PLEKHF1Q96S99 279 aa17.8■□□□□ 0.44
CACNA1C-231ENST00000616390 NCKAP5LQ9HCH0 1330 aa17.79■□□□□ 0.44
CACNA1C-231ENST00000616390 HMOX1P09601 288 aa17.79■□□□□ 0.44
CACNA1C-231ENST00000616390 TXNDC2Q86VQ3 553 aa17.79■□□□□ 0.44
CACNA1C-231ENST00000616390 TRIM35Q9UPQ4 493 aa17.79■□□□□ 0.44
CACNA1C-231ENST00000616390 TAF7LQ5H9L4 462 aa17.78■□□□□ 0.44
CACNA1C-231ENST00000616390 CLTCQ00610 1675 aaKnown RBP17.78■□□□□ 0.44
CACNA1C-231ENST00000616390 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
CACNA1C-231ENST00000616390 CD163L1Q9NR16 1453 aa17.77■□□□□ 0.43
CACNA1C-231ENST00000616390 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.76■□□□□ 0.43
CACNA1C-231ENST00000616390 SEC24BO95487 1268 aa17.76■□□□□ 0.43
CACNA1C-231ENST00000616390 ZKSCAN2Q63HK3 967 aa17.76■□□□□ 0.43
CACNA1C-231ENST00000616390 NINLQ9Y2I6 1382 aa17.75■□□□□ 0.43
CACNA1C-231ENST00000616390 NUTM2FA1L443 756 aa17.75■□□□□ 0.43
CACNA1C-231ENST00000616390 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
CACNA1C-231ENST00000616390 SSH1Q8WYL5 1049 aa17.75■□□□□ 0.43
CACNA1C-231ENST00000616390 PRKAR2BP31323 418 aa17.74■□□□□ 0.43
CACNA1C-231ENST00000616390 ITPRIPQ8IWB1 547 aa17.74■□□□□ 0.43
CACNA1C-231ENST00000616390 PMFBP1Q8TBY8 1022 aa17.74■□□□□ 0.43
CACNA1C-231ENST00000616390 RIMS2Q9UQ26 1411 aa17.74■□□□□ 0.43
CACNA1C-231ENST00000616390 RIMBP3CA6NJZ7 1639 aa17.74■□□□□ 0.43
CACNA1C-231ENST00000616390 RIMBP3BA6NNM3 1639 aa17.74■□□□□ 0.43
CACNA1C-231ENST00000616390 RIMBP3Q9UFD9 1639 aa17.74■□□□□ 0.43
CACNA1C-231ENST00000616390 THUMPD2Q9BTF0 503 aaKnown RBP17.74■□□□□ 0.43
CACNA1C-231ENST00000616390 NME9Q86XW9 330 aa17.73■□□□□ 0.43
CACNA1C-231ENST00000616390 PDZRN3Q9UPQ7 1066 aa17.73■□□□□ 0.43
CACNA1C-231ENST00000616390 EMILIN1Q9Y6C2 1016 aa17.73■□□□□ 0.43
CACNA1C-231ENST00000616390 MVPQ14764 893 aaKnown RBP17.73■□□□□ 0.43
CACNA1C-231ENST00000616390 POLKQ9UBT6 870 aa17.73■□□□□ 0.43
CACNA1C-231ENST00000616390 NOB1Q9ULX3 412 aaKnown RBP17.73■□□□□ 0.43
CACNA1C-231ENST00000616390 DIP2BQ9P265 1576 aa17.72■□□□□ 0.43
CACNA1C-231ENST00000616390 A0A0U1RQG5 324 aaPredicted RBP17.71■□□□□ 0.43
CACNA1C-231ENST00000616390 ELL2O00472 640 aaPredicted RBP17.71■□□□□ 0.43
CACNA1C-231ENST00000616390 TRIM27P14373 513 aa17.71■□□□□ 0.43
CACNA1C-231ENST00000616390 ARHGEF40Q8TER5 1519 aa17.71■□□□□ 0.43
CACNA1C-231ENST00000616390 A2ML1A8K2U0 1454 aa17.71■□□□□ 0.43
CACNA1C-231ENST00000616390 RWDD1Q9H446 243 aaPredicted RBP17.71■□□□□ 0.42
CACNA1C-231ENST00000616390 RRS1Q15050 365 aaKnown RBP17.7■□□□□ 0.42
CACNA1C-231ENST00000616390 PHACTR3Q96KR7 559 aa17.7■□□□□ 0.42
CACNA1C-231ENST00000616390 AAMPQ13685 434 aa17.7■□□□□ 0.42
CACNA1C-231ENST00000616390 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
CACNA1C-231ENST00000616390 NLRP1Q9C000 1473 aa17.69■□□□□ 0.42
CACNA1C-231ENST00000616390 METP08581 1390 aa17.69■□□□□ 0.42
CACNA1C-231ENST00000616390 MAP2P11137 1827 aaKnown RBP17.69■□□□□ 0.42
CACNA1C-231ENST00000616390 WASLO00401 505 aaPredicted RBP17.68■□□□□ 0.42
CACNA1C-231ENST00000616390 ADGRB2O60241 1585 aa17.68■□□□□ 0.42
CACNA1C-231ENST00000616390 SOX12O15370 315 aa17.67■□□□□ 0.42
CACNA1C-231ENST00000616390 NUDT16Q96DE0 195 aaKnown RBP17.67■□□□□ 0.42
CACNA1C-231ENST00000616390 FCHSD2O94868 740 aa17.67■□□□□ 0.42
CACNA1C-231ENST00000616390 ATF7IPQ6VMQ6 1270 aa17.67■□□□□ 0.42
CACNA1C-231ENST00000616390 TMEM57Q8N5G2 664 aa17.67■□□□□ 0.42
CACNA1C-231ENST00000616390 PNNQ9H307 717 aaKnown RBP17.67■□□□□ 0.42
CACNA1C-231ENST00000616390 PPIP5K1Q6PFW1 1433 aa17.66■□□□□ 0.42
CACNA1C-231ENST00000616390 RSPH6AQ9H0K4 717 aa17.66■□□□□ 0.42
CACNA1C-231ENST00000616390 KIF20BQ96Q89 1820 aa17.66■□□□□ 0.42
CACNA1C-231ENST00000616390 ANKRD26Q9UPS8 1709 aa17.65■□□□□ 0.42
CACNA1C-231ENST00000616390 ZMYM3Q14202 1370 aa17.65■□□□□ 0.42
CACNA1C-231ENST00000616390 NFKBIBQ15653 356 aa17.64■□□□□ 0.41
CACNA1C-231ENST00000616390 COG3Q96JB2 828 aa17.63■□□□□ 0.41
CACNA1C-231ENST00000616390 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
CACNA1C-231ENST00000616390 USP19O94966 1318 aa17.63■□□□□ 0.41
CACNA1C-231ENST00000616390 DDX19BQ9UMR2 479 aa17.62■□□□□ 0.41
CACNA1C-231ENST00000616390 PNPLA6Q8IY17 1366 aa17.62■□□□□ 0.41
CACNA1C-231ENST00000616390 FAM83GA6ND36 823 aa17.62■□□□□ 0.41
CACNA1C-231ENST00000616390 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
CACNA1C-231ENST00000616390 LRRC7Q96NW7 1537 aa17.62■□□□□ 0.41
CACNA1C-231ENST00000616390 CT47B1P0C2W7 299 aaPredicted RBP17.62■□□□□ 0.41
CACNA1C-231ENST00000616390 TSPYL6Q8N831 410 aa17.62■□□□□ 0.41
CACNA1C-231ENST00000616390 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.62■□□□□ 0.41
CACNA1C-231ENST00000616390 CEBPAP49715 358 aaPredicted RBP17.61■□□□□ 0.41
CACNA1C-231ENST00000616390 CCDC61Q9Y6R9 512 aa17.61■□□□□ 0.41
CACNA1C-231ENST00000616390 MED14O60244 1454 aa17.61■□□□□ 0.41
CACNA1C-231ENST00000616390 SLKQ9H2G2 1235 aaPredicted RBP17.6■□□□□ 0.41
CACNA1C-231ENST00000616390 NFE2L2Q16236 605 aa17.6■□□□□ 0.41
CACNA1C-231ENST00000616390 ZMYND15Q9H091 742 aa17.6■□□□□ 0.41
CACNA1C-231ENST00000616390 SPATA31D1Q6ZQQ2 1576 aa17.6■□□□□ 0.41
CACNA1C-231ENST00000616390 IL16Q14005 1332 aa17.59■□□□□ 0.41
CACNA1C-231ENST00000616390 C1orf115Q9H7X2 142 aa17.59■□□□□ 0.41
CACNA1C-231ENST00000616390 UPF2Q9HAU5 1272 aaKnown RBP17.59■□□□□ 0.41
CACNA1C-231ENST00000616390 IPO8O15397 1037 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms