RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 LMOD3Q0VAK6 560 aa16.24■□□□□ 0.19
PPP4R3B-205ENST00000616288 PLEKHH1Q9ULM0 1364 aa16.24■□□□□ 0.19
PPP4R3B-205ENST00000616288 HSP90B2PQ58FF3 399 aa16.24■□□□□ 0.19
PPP4R3B-205ENST00000616288 SMC3Q9UQE7 1217 aa16.24■□□□□ 0.19
PPP4R3B-205ENST00000616288 TTLL5Q6EMB2 1281 aa16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 NGEFQ8N5V2 710 aa16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 NKTRP30414 1462 aaKnown RBP16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 ANKRD30BQ9BXX2 1392 aa16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 H0YHG0 523 aa16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 IBSPP21815 317 aaPredicted RBP16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 BMS1Q14692 1282 aaKnown RBP16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 RUNDC1Q96C34 613 aa16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 EXOSC9Q06265 439 aaKnown RBP16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 HSP90AB3PQ58FF7 597 aa16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 UBXN4Q92575 508 aa16.23■□□□□ 0.19
PPP4R3B-205ENST00000616288 LMAN1P49257 510 aa16.22■□□□□ 0.19
PPP4R3B-205ENST00000616288 CCDC191Q8NCU4 936 aa16.22■□□□□ 0.19
PPP4R3B-205ENST00000616288 TBC1D9Q6ZT07 1266 aa16.22■□□□□ 0.19
PPP4R3B-205ENST00000616288 FAM177A1Q8N128 213 aaPredicted RBP16.22■□□□□ 0.19
PPP4R3B-205ENST00000616288 NOB1Q9ULX3 412 aaKnown RBP16.22■□□□□ 0.19
PPP4R3B-205ENST00000616288 NINLQ9Y2I6 1382 aa16.22■□□□□ 0.19
PPP4R3B-205ENST00000616288 ZNF644Q9H582 1327 aaPredicted RBP16.21■□□□□ 0.19
PPP4R3B-205ENST00000616288 CAMK4Q16566 473 aa16.21■□□□□ 0.18
PPP4R3B-205ENST00000616288 CCDC183Q5T5S1 534 aa16.21■□□□□ 0.18
PPP4R3B-205ENST00000616288 ZGPATQ8N5A5 531 aaKnown RBP16.2■□□□□ 0.18
PPP4R3B-205ENST00000616288 RLBP1P12271 317 aa16.2■□□□□ 0.18
PPP4R3B-205ENST00000616288 DRC1Q96MC2 740 aa16.2■□□□□ 0.18
PPP4R3B-205ENST00000616288 TMEM63CQ9P1W3 806 aa16.2■□□□□ 0.18
PPP4R3B-205ENST00000616288 CEP135Q66GS9 1140 aa16.2■□□□□ 0.18
PPP4R3B-205ENST00000616288 CCDC186Q7Z3E2 898 aa16.2■□□□□ 0.18
PPP4R3B-205ENST00000616288 KIF18AQ8NI77 898 aa16.2■□□□□ 0.18
PPP4R3B-205ENST00000616288 CHMP4CQ96CF2 233 aa16.2■□□□□ 0.18
PPP4R3B-205ENST00000616288 CHAMP1Q96JM3 812 aa16.2■□□□□ 0.18
PPP4R3B-205ENST00000616288 BRD2P25440 801 aaKnown RBP16.19■□□□□ 0.18
PPP4R3B-205ENST00000616288 CALRP27797 417 aaKnown RBP16.19■□□□□ 0.18
PPP4R3B-205ENST00000616288 GIMAP6Q6P9H5 292 aa16.19■□□□□ 0.18
PPP4R3B-205ENST00000616288 CFTRP13569 1480 aa16.19■□□□□ 0.18
PPP4R3B-205ENST00000616288 LMBRD1Q9NUN5 540 aa16.18■□□□□ 0.18
PPP4R3B-205ENST00000616288 RDXP35241 583 aaKnown RBP16.18■□□□□ 0.18
PPP4R3B-205ENST00000616288 OS9Q13438 667 aaPredicted RBP16.18■□□□□ 0.18
PPP4R3B-205ENST00000616288 ZNF397Q8NF99 534 aaPredicted RBP16.18■□□□□ 0.18
PPP4R3B-205ENST00000616288 WDR33Q9C0J8 1336 aaKnown RBP16.18■□□□□ 0.18
PPP4R3B-205ENST00000616288 HSP90B1P14625 803 aaKnown RBP16.18■□□□□ 0.18
PPP4R3B-205ENST00000616288 SLC4A10Q6U841 1118 aa16.18■□□□□ 0.18
PPP4R3B-205ENST00000616288 ATF7IPQ6VMQ6 1270 aa16.18■□□□□ 0.18
PPP4R3B-205ENST00000616288 KRBA2Q6ZNG9 492 aa16.18■□□□□ 0.18
PPP4R3B-205ENST00000616288 TMEM57Q8N5G2 664 aa16.18■□□□□ 0.18
PPP4R3B-205ENST00000616288 PTGS1P23219 599 aa16.17■□□□□ 0.18
PPP4R3B-205ENST00000616288 UVSSAQ2YD98 709 aa16.17■□□□□ 0.18
PPP4R3B-205ENST00000616288 PAXBP1Q9Y5B6 917 aa16.17■□□□□ 0.18
PPP4R3B-205ENST00000616288 SPATA31E1Q6ZUB1 1445 aa16.17■□□□□ 0.18
PPP4R3B-205ENST00000616288 CLGNO14967 610 aa16.17■□□□□ 0.18
PPP4R3B-205ENST00000616288 TXLNBQ8N3L3 684 aa16.17■□□□□ 0.18
PPP4R3B-205ENST00000616288 SECISBP2LQ93073 1101 aaKnown RBP16.17■□□□□ 0.18
PPP4R3B-205ENST00000616288 LRRFIP2Q9Y608 721 aaKnown RBP16.17■□□□□ 0.18
PPP4R3B-205ENST00000616288 IGF1RP08069 1367 aa16.17■□□□□ 0.18
PPP4R3B-205ENST00000616288 BANK1Q8NDB2 785 aa16.17■□□□□ 0.18
PPP4R3B-205ENST00000616288 RPRD2Q5VT52 1461 aaKnown RBP16.17■□□□□ 0.18
PPP4R3B-205ENST00000616288 FMNL2Q96PY5 1086 aa16.16■□□□□ 0.18
PPP4R3B-205ENST00000616288 UPF3BQ9BZI7 483 aaKnown RBP16.16■□□□□ 0.18
PPP4R3B-205ENST00000616288 PLEKHH2Q8IVE3 1493 aa16.16■□□□□ 0.18
PPP4R3B-205ENST00000616288 ZNF710Q8N1W2 664 aa16.15■□□□□ 0.18
PPP4R3B-205ENST00000616288 TNMDQ9H2S6 317 aa16.15■□□□□ 0.18
PPP4R3B-205ENST00000616288 MNAT1P51948 309 aa16.15■□□□□ 0.18
PPP4R3B-205ENST00000616288 SMTNL1A8MU46 457 aa16.15■□□□□ 0.18
PPP4R3B-205ENST00000616288 CLIP2Q9UDT6 1046 aa16.14■□□□□ 0.17
PPP4R3B-205ENST00000616288 CKAP2LQ8IYA6 745 aa16.14■□□□□ 0.17
PPP4R3B-205ENST00000616288 GCC1Q96CN9 775 aa16.14■□□□□ 0.17
PPP4R3B-205ENST00000616288 PARD3Q8TEW0 1356 aa16.14■□□□□ 0.17
PPP4R3B-205ENST00000616288 HMMRO75330 724 aa16.14■□□□□ 0.17
PPP4R3B-205ENST00000616288 PKP1Q13835 747 aa16.13■□□□□ 0.17
PPP4R3B-205ENST00000616288 SAFB2Q14151 953 aaKnown RBP eCLIP16.13■□□□□ 0.17
PPP4R3B-205ENST00000616288 MCM2P49736 904 aa16.13■□□□□ 0.17
PPP4R3B-205ENST00000616288 CTR9Q6PD62 1173 aa16.13■□□□□ 0.17
PPP4R3B-205ENST00000616288 NEK11Q8NG66 645 aa16.13■□□□□ 0.17
PPP4R3B-205ENST00000616288 NOC3LQ8WTT2 800 aaKnown RBP16.13■□□□□ 0.17
PPP4R3B-205ENST00000616288 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.13■□□□□ 0.17
PPP4R3B-205ENST00000616288 TTC31Q49AM3 519 aaPredicted RBP16.13■□□□□ 0.17
PPP4R3B-205ENST00000616288 TDO2P48775 406 aa16.12■□□□□ 0.17
PPP4R3B-205ENST00000616288 BMP2KLQ5H9B9 411 aa16.12■□□□□ 0.17
PPP4R3B-205ENST00000616288 RNF20Q5VTR2 975 aa16.12■□□□□ 0.17
PPP4R3B-205ENST00000616288 GIMAP7Q8NHV1 300 aa16.12■□□□□ 0.17
PPP4R3B-205ENST00000616288 SMC2O95347 1197 aa16.12■□□□□ 0.17
PPP4R3B-205ENST00000616288 CD2BP2O95400 341 aaKnown RBP16.12■□□□□ 0.17
PPP4R3B-205ENST00000616288 CUX1P39880 1505 aa16.12■□□□□ 0.17
PPP4R3B-205ENST00000616288 RSPH4AQ5TD94 716 aa16.12■□□□□ 0.17
PPP4R3B-205ENST00000616288 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
PPP4R3B-205ENST00000616288 NUP62CLQ9H1M0 184 aa16.12■□□□□ 0.17
PPP4R3B-205ENST00000616288 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.12■□□□□ 0.17
PPP4R3B-205ENST00000616288 ELF2Q15723 593 aa16.11■□□□□ 0.17
PPP4R3B-205ENST00000616288 URI1O94763 535 aaPredicted RBP16.11■□□□□ 0.17
PPP4R3B-205ENST00000616288 CCDC102AQ96A19 550 aa16.11■□□□□ 0.17
PPP4R3B-205ENST00000616288 PDLIM2Q96JY6 352 aa16.11■□□□□ 0.17
PPP4R3B-205ENST00000616288 USP48Q86UV5 1035 aa16.11■□□□□ 0.17
PPP4R3B-205ENST00000616288 H3BQV1 296 aa16.1■□□□□ 0.17
PPP4R3B-205ENST00000616288 ERC2O15083 957 aa16.1■□□□□ 0.17
PPP4R3B-205ENST00000616288 KDM4AO75164 1064 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms