RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 WDR7Q9Y4E6 1490 aa8.21□□□□□ -1.1
LMO3-235ENST00000616247 KIAA2012Q0VF49 1180 aa8.21□□□□□ -1.1
LMO3-235ENST00000616247 SLC4A2P04920 1241 aa8.2□□□□□ -1.1
LMO3-235ENST00000616247 HDAC1Q13547 482 aaPredicted RBP8.2□□□□□ -1.1
LMO3-235ENST00000616247 ZGPATQ8N5A5 531 aaKnown RBP8.2□□□□□ -1.1
LMO3-235ENST00000616247 SPDYE4A6NLX3 237 aa8.2□□□□□ -1.1
LMO3-235ENST00000616247 NUCB1Q02818 461 aa8.2□□□□□ -1.1
LMO3-235ENST00000616247 GGNBP2Q9H3C7 697 aa8.2□□□□□ -1.1
LMO3-235ENST00000616247 CCDC39Q9UFE4 941 aa8.2□□□□□ -1.1
LMO3-235ENST00000616247 ZKSCAN5Q9Y2L8 839 aa8.2□□□□□ -1.1
LMO3-235ENST00000616247 FAM135AQ9P2D6 1515 aa8.2□□□□□ -1.1
LMO3-235ENST00000616247 C17orf53Q8N3J3 647 aaPredicted RBP8.2□□□□□ -1.1
LMO3-235ENST00000616247 NOL7Q9UMY1 257 aaKnown RBP8.2□□□□□ -1.1
LMO3-235ENST00000616247 ADGRL2O95490 1459 aa8.19□□□□□ -1.1
LMO3-235ENST00000616247 CDC45O75419 566 aa8.19□□□□□ -1.1
LMO3-235ENST00000616247 SASS6Q6UVJ0 657 aa8.19□□□□□ -1.1
LMO3-235ENST00000616247 THUMPD2Q9BTF0 503 aaKnown RBP8.19□□□□□ -1.1
LMO3-235ENST00000616247 GDPD2Q9HCC8 539 aa8.19□□□□□ -1.1
LMO3-235ENST00000616247 ST18O60284 1047 aa8.19□□□□□ -1.1
LMO3-235ENST00000616247 STK26Q9P289 416 aa8.19□□□□□ -1.1
LMO3-235ENST00000616247 NSD3Q9BZ95 1437 aa8.19□□□□□ -1.1
LMO3-235ENST00000616247 BMP2KLQ5H9B9 411 aa8.18□□□□□ -1.1
LMO3-235ENST00000616247 ZBTB40Q9NUA8 1239 aa8.18□□□□□ -1.1
LMO3-235ENST00000616247 ZNF219Q9P2Y4 722 aaPredicted RBP8.18□□□□□ -1.1
LMO3-235ENST00000616247 PRDM4Q9UKN5 801 aa8.18□□□□□ -1.1
LMO3-235ENST00000616247 DYNC1I1O14576 645 aa8.18□□□□□ -1.1
LMO3-235ENST00000616247 TMPOP42166 694 aaKnown RBP8.18□□□□□ -1.1
LMO3-235ENST00000616247 RSPH4AQ5TD94 716 aa8.18□□□□□ -1.1
LMO3-235ENST00000616247 SAMD1Q6SPF0 538 aaPredicted RBP8.18□□□□□ -1.1
LMO3-235ENST00000616247 CARMIL2Q6F5E8 1435 aa8.18□□□□□ -1.1
LMO3-235ENST00000616247 KDM5DQ9BY66 1539 aa8.18□□□□□ -1.1
LMO3-235ENST00000616247 KIF3BO15066 747 aa8.18□□□□□ -1.1
LMO3-235ENST00000616247 CASC1Q6TDU7 716 aa8.18□□□□□ -1.1
LMO3-235ENST00000616247 C16orf71Q8IYS4 520 aaPredicted RBP8.18□□□□□ -1.1
LMO3-235ENST00000616247 LMBRD1Q9NUN5 540 aa8.18□□□□□ -1.1
LMO3-235ENST00000616247 PLA2R1Q13018 1463 aa8.17□□□□□ -1.1
LMO3-235ENST00000616247 SRPK2P78362 688 aaKnown RBP8.17□□□□□ -1.1
LMO3-235ENST00000616247 RABEP1Q15276 862 aa8.17□□□□□ -1.1
LMO3-235ENST00000616247 MTERF4Q7Z6M4 381 aaKnown RBP8.17□□□□□ -1.1
LMO3-235ENST00000616247 KIF2CQ99661 725 aa8.17□□□□□ -1.1
LMO3-235ENST00000616247 ADGRF5Q8IZF2 1346 aa8.17□□□□□ -1.1
LMO3-235ENST00000616247 NEK4P51957 841 aa8.17□□□□□ -1.1
LMO3-235ENST00000616247 TTC12Q9H892 705 aaPredicted RBP8.17□□□□□ -1.1
LMO3-235ENST00000616247 TMEM63CQ9P1W3 806 aa8.17□□□□□ -1.1
LMO3-235ENST00000616247 KIAA0556O60303 1618 aa8.17□□□□□ -1.1
LMO3-235ENST00000616247 PPP4R3BQ5MIZ7 849 aa8.16□□□□□ -1.1
LMO3-235ENST00000616247 CABP2Q9NPB3 220 aa8.16□□□□□ -1.1
LMO3-235ENST00000616247 NSFL1CQ9UNZ2 370 aaKnown RBP8.16□□□□□ -1.1
LMO3-235ENST00000616247 E9PCH4 1651 aa8.16□□□□□ -1.1
LMO3-235ENST00000616247 DDIT3P35638 169 aa8.16□□□□□ -1.1
LMO3-235ENST00000616247 ZNF445P59923 1031 aa8.16□□□□□ -1.1
LMO3-235ENST00000616247 GPT2Q8TD30 523 aa8.16□□□□□ -1.1
LMO3-235ENST00000616247 USP25Q9UHP3 1055 aa8.16□□□□□ -1.1
LMO3-235ENST00000616247 SMARCA5O60264 1052 aaPredicted RBP8.16□□□□□ -1.1
LMO3-235ENST00000616247 HMOX1P09601 288 aa8.16□□□□□ -1.1
LMO3-235ENST00000616247 SMAP1Q8IYB5 467 aaPredicted RBP8.16□□□□□ -1.1
LMO3-235ENST00000616247 AFAP1Q8N556 730 aa8.16□□□□□ -1.1
LMO3-235ENST00000616247 TSPY26PQ9H489 355 aa8.16□□□□□ -1.1
LMO3-235ENST00000616247 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.16□□□□□ -1.1
LMO3-235ENST00000616247 RAPGEF6Q8TEU7 1601 aa8.16□□□□□ -1.1
LMO3-235ENST00000616247 ZNF500O60304 480 aaPredicted RBP8.15□□□□□ -1.1
LMO3-235ENST00000616247 OSCARQ8IYS5 282 aa8.15□□□□□ -1.1
LMO3-235ENST00000616247 SCAF11Q99590 1463 aaKnown RBP8.15□□□□□ -1.1
LMO3-235ENST00000616247 CHAF1AQ13111 956 aaPredicted RBP8.15□□□□□ -1.11
LMO3-235ENST00000616247 LRSAM1Q6UWE0 723 aa8.15□□□□□ -1.11
LMO3-235ENST00000616247 ZNF771Q7L3S4 317 aaPredicted RBP8.15□□□□□ -1.11
LMO3-235ENST00000616247 SPC24Q8NBT2 197 aa8.15□□□□□ -1.11
LMO3-235ENST00000616247 CHMP3Q9Y3E7 222 aa8.15□□□□□ -1.11
LMO3-235ENST00000616247 RTEL1-TNFRSF6BF6WH68 1400 aa8.15□□□□□ -1.11
LMO3-235ENST00000616247 POLR3AO14802 1390 aaPredicted RBP8.15□□□□□ -1.11
LMO3-235ENST00000616247 DTNBO60941 627 aa8.14□□□□□ -1.11
LMO3-235ENST00000616247 FBLN1P23142 703 aa8.14□□□□□ -1.11
LMO3-235ENST00000616247 GCC1Q96CN9 775 aa8.14□□□□□ -1.11
LMO3-235ENST00000616247 CCDC94Q9BW85 323 aaPredicted RBP8.14□□□□□ -1.11
LMO3-235ENST00000616247 ATAD2Q6PL18 1390 aa8.14□□□□□ -1.11
LMO3-235ENST00000616247 INTS3Q68E01 1043 aaKnown RBP8.14□□□□□ -1.11
LMO3-235ENST00000616247 OTUD7AQ8TE49 926 aaPredicted RBP8.14□□□□□ -1.11
LMO3-235ENST00000616247 SYAP1Q96A49 352 aaPredicted RBP8.14□□□□□ -1.11
LMO3-235ENST00000616247 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.14□□□□□ -1.11
LMO3-235ENST00000616247 TRPM1Q7Z4N2 1603 aa8.14□□□□□ -1.11
LMO3-235ENST00000616247 CCDC141Q6ZP82 1450 aa8.14□□□□□ -1.11
LMO3-235ENST00000616247 TERF1P54274 439 aa8.13□□□□□ -1.11
LMO3-235ENST00000616247 HS1BP3Q53T59 392 aa8.13□□□□□ -1.11
LMO3-235ENST00000616247 KIF3AQ9Y496 699 aa8.13□□□□□ -1.11
LMO3-235ENST00000616247 SPAG9O60271 1321 aaKnown RBP8.13□□□□□ -1.11
LMO3-235ENST00000616247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.13□□□□□ -1.11
LMO3-235ENST00000616247 BBXQ8WY36 941 aaPredicted RBP8.13□□□□□ -1.11
LMO3-235ENST00000616247 CHMP4BQ9H444 224 aaKnown RBP8.13□□□□□ -1.11
LMO3-235ENST00000616247 PRDM15P57071 1507 aaPredicted RBP8.13□□□□□ -1.11
LMO3-235ENST00000616247 ABCC2Q92887 1545 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 TRIM6-TRIM34B2RNG4 842 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 UPF3BQ9BZI7 483 aaKnown RBP8.12□□□□□ -1.11
LMO3-235ENST00000616247 ADGBQ8N7X0 1667 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 PTPRGP23470 1445 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 CLASP1Q7Z460 1538 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 MBD3O95983 291 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 CDK11BP21127 795 aaKnown RBP8.12□□□□□ -1.11
LMO3-235ENST00000616247 PRKAR2BP31323 418 aa8.12□□□□□ -1.11
LMO3-235ENST00000616247 NOLC1Q14978 699 aaKnown RBP eCLIP8.12□□□□□ -1.11
LMO3-235ENST00000616247 CCDC27Q2M243 656 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms