RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	LMBRD1	Q9NUN5	540 aa		18.99	■□□□□ 0.63
SYNRG-223	ENST00000616179	TMEM132E	Q6IEE7	984 aa		18.98	■□□□□ 0.63
SYNRG-223	ENST00000616179	GCC1	Q96CN9	775 aa		18.98	■□□□□ 0.63
SYNRG-223	ENST00000616179	TMEM63C	Q9P1W3	806 aa		18.98	■□□□□ 0.63
SYNRG-223	ENST00000616179	UHRF1BP1	Q6BDS2	1440 aa		18.98	■□□□□ 0.63
SYNRG-223	ENST00000616179	SMARCA5	O60264	1052 aa	Predicted RBP	18.98	■□□□□ 0.63
SYNRG-223	ENST00000616179	ZNF445	P59923	1031 aa		18.98	■□□□□ 0.63
SYNRG-223	ENST00000616179	THUMPD2	Q9BTF0	503 aa	Known RBP	18.98	■□□□□ 0.63
SYNRG-223	ENST00000616179	TOPBP1	Q92547	1522 aa		18.98	■□□□□ 0.63
SYNRG-223	ENST00000616179	HCLS1	P14317	486 aa	Predicted RBP	18.97	■□□□□ 0.63
SYNRG-223	ENST00000616179	NES	P48681	1621 aa		18.97	■□□□□ 0.63
SYNRG-223	ENST00000616179	KCNJ4	P48050	445 aa		18.97	■□□□□ 0.63
SYNRG-223	ENST00000616179	ZNF692	Q9BU19	519 aa	Predicted RBP	18.97	■□□□□ 0.63
SYNRG-223	ENST00000616179	ABCA10	Q8WWZ4	1543 aa		18.97	■□□□□ 0.63
SYNRG-223	ENST00000616179	HMOX1	P09601	288 aa		18.97	■□□□□ 0.63
SYNRG-223	ENST00000616179	KIF14	Q15058	1648 aa		18.96	■□□□□ 0.63
SYNRG-223	ENST00000616179	ABCA5	Q8WWZ7	1642 aa		18.96	■□□□□ 0.63
SYNRG-223	ENST00000616179	CHMP4A	Q9BY43	222 aa		18.96	■□□□□ 0.63
SYNRG-223	ENST00000616179	UPF3B	Q9BZI7	483 aa	Known RBP	18.96	■□□□□ 0.63
SYNRG-223	ENST00000616179	TAOK2	Q9UL54	1235 aa		18.96	■□□□□ 0.63
SYNRG-223	ENST00000616179	GPRASP1	Q5JY77	1395 aa		18.96	■□□□□ 0.63
SYNRG-223	ENST00000616179	CARD14	Q9BXL6	1004 aa		18.96	■□□□□ 0.63
SYNRG-223	ENST00000616179	DMTN	Q08495	405 aa		18.95	■□□□□ 0.62
SYNRG-223	ENST00000616179	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.95	■□□□□ 0.62
SYNRG-223	ENST00000616179	GCC2	Q8IWJ2	1684 aa		18.94	■□□□□ 0.62
SYNRG-223	ENST00000616179	LARP6	Q9BRS8	491 aa	Known RBP	18.94	■□□□□ 0.62
SYNRG-223	ENST00000616179	MYRIP	Q8NFW9	859 aa		18.94	■□□□□ 0.62
SYNRG-223	ENST00000616179	TMPO	P42166	694 aa	Known RBP	18.93	■□□□□ 0.62
SYNRG-223	ENST00000616179	GPT2	Q8TD30	523 aa		18.93	■□□□□ 0.62
SYNRG-223	ENST00000616179	PRIMPOL	Q96LW4	560 aa		18.93	■□□□□ 0.62
SYNRG-223	ENST00000616179	C16orf45	Q96MC5	204 aa	Predicted RBP	18.93	■□□□□ 0.62
SYNRG-223	ENST00000616179	GTPBP4	Q9BZE4	634 aa	Known RBP	18.93	■□□□□ 0.62
SYNRG-223	ENST00000616179	TRO	Q12816	1431 aa	Predicted RBP	18.93	■□□□□ 0.62
SYNRG-223	ENST00000616179	COL17A1	Q9UMD9	1497 aa	Predicted RBP	18.93	■□□□□ 0.62
SYNRG-223	ENST00000616179	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	18.93	■□□□□ 0.62
SYNRG-223	ENST00000616179	JPH4	Q96JJ6	628 aa		18.92	■□□□□ 0.62
SYNRG-223	ENST00000616179	LETM1	O95202	739 aa	Predicted RBP	18.92	■□□□□ 0.62
SYNRG-223	ENST00000616179	VPS37C	A5D8V6	355 aa	Predicted RBP	18.92	■□□□□ 0.62
SYNRG-223	ENST00000616179	KIF3B	O15066	747 aa		18.92	■□□□□ 0.62
SYNRG-223	ENST00000616179	TPD52L1	Q16890	204 aa	Predicted RBP	18.92	■□□□□ 0.62
SYNRG-223	ENST00000616179	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.91	■□□□□ 0.62
SYNRG-223	ENST00000616179	DTNB	O60941	627 aa		18.91	■□□□□ 0.62
SYNRG-223	ENST00000616179	ZBTB40	Q9NUA8	1239 aa		18.91	■□□□□ 0.62
SYNRG-223	ENST00000616179	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.91	■□□□□ 0.62
SYNRG-223	ENST00000616179	AEBP1	Q8IUX7	1158 aa		18.9	■□□□□ 0.62
SYNRG-223	ENST00000616179	SOX12	O15370	315 aa		18.9	■□□□□ 0.62
SYNRG-223	ENST00000616179	CABP2	Q9NPB3	220 aa		18.9	■□□□□ 0.62
SYNRG-223	ENST00000616179	TRIM5	Q9C035	493 aa		18.9	■□□□□ 0.62
SYNRG-223	ENST00000616179	BCL2L12	Q9HB09	334 aa		18.9	■□□□□ 0.62
SYNRG-223	ENST00000616179	FBXW7	Q969H0	707 aa		18.89	■□□□□ 0.61
SYNRG-223	ENST00000616179	NSD3	Q9BZ95	1437 aa		18.89	■□□□□ 0.61
SYNRG-223	ENST00000616179	DIAPH1	O60610	1272 aa	Known RBP	18.88	■□□□□ 0.61
SYNRG-223	ENST00000616179	MAGI2	Q86UL8	1455 aa		18.88	■□□□□ 0.61
SYNRG-223	ENST00000616179	TSHZ3	Q63HK5	1081 aa		18.88	■□□□□ 0.61
SYNRG-223	ENST00000616179	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
SYNRG-223	ENST00000616179		V9GYY5	206 aa	Predicted RBP	18.88	■□□□□ 0.61
SYNRG-223	ENST00000616179	CCDC66	A2RUB6	948 aa		18.88	■□□□□ 0.61
SYNRG-223	ENST00000616179	ATP2B3	Q16720	1220 aa		18.88	■□□□□ 0.61
SYNRG-223	ENST00000616179	CCDC112	Q8NEF3	446 aa		18.88	■□□□□ 0.61
SYNRG-223	ENST00000616179	MBD5	Q9P267	1494 aa		18.88	■□□□□ 0.61
SYNRG-223	ENST00000616179	HMGXB3	Q12766	1538 aa		18.87	■□□□□ 0.61
SYNRG-223	ENST00000616179	ERC2	O15083	957 aa		18.87	■□□□□ 0.61
SYNRG-223	ENST00000616179	GIMAP6	Q6P9H5	292 aa		18.87	■□□□□ 0.61
SYNRG-223	ENST00000616179	KIF20A	O95235	890 aa		18.87	■□□□□ 0.61
SYNRG-223	ENST00000616179	RIOK3	O14730	519 aa	Known RBP	18.86	■□□□□ 0.61
SYNRG-223	ENST00000616179	ZBTB22	O15209	634 aa		18.86	■□□□□ 0.61
SYNRG-223	ENST00000616179	RSPH4A	Q5TD94	716 aa		18.86	■□□□□ 0.61
SYNRG-223	ENST00000616179	INSR	P06213	1382 aa		18.86	■□□□□ 0.61
SYNRG-223	ENST00000616179	PRKAR2B	P31323	418 aa		18.85	■□□□□ 0.61
SYNRG-223	ENST00000616179	ZRSR1	Q15695	479 aa	Known RBP	18.85	■□□□□ 0.61
SYNRG-223	ENST00000616179	CAMK4	Q16566	473 aa		18.85	■□□□□ 0.61
SYNRG-223	ENST00000616179	TMX3	Q96JJ7	454 aa		18.85	■□□□□ 0.61
SYNRG-223	ENST00000616179	ASXL1	Q8IXJ9	1541 aa		18.85	■□□□□ 0.61
SYNRG-223	ENST00000616179	SMC3	Q9UQE7	1217 aa		18.85	■□□□□ 0.61
SYNRG-223	ENST00000616179	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.84	■□□□□ 0.61
SYNRG-223	ENST00000616179	HMMR	O75330	724 aa		18.84	■□□□□ 0.61
SYNRG-223	ENST00000616179	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
SYNRG-223	ENST00000616179	RTF1	Q92541	710 aa	Known RBP	18.84	■□□□□ 0.61
SYNRG-223	ENST00000616179	API5	Q9BZZ5	524 aa	Known RBP	18.84	■□□□□ 0.61
SYNRG-223	ENST00000616179	GADD45B	O75293	160 aa	Predicted RBP	18.84	■□□□□ 0.61
SYNRG-223	ENST00000616179	USP48	Q86UV5	1035 aa		18.84	■□□□□ 0.61
SYNRG-223	ENST00000616179	FAM184A	Q8NB25	1140 aa		18.84	■□□□□ 0.61
SYNRG-223	ENST00000616179	PIK3C2G	O75747	1445 aa		18.83	■□□□□ 0.61
SYNRG-223	ENST00000616179	CT47B1	P0C2W7	299 aa	Predicted RBP	18.83	■□□□□ 0.61
SYNRG-223	ENST00000616179	ZSCAN20	P17040	1043 aa	Predicted RBP	18.83	■□□□□ 0.6
SYNRG-223	ENST00000616179	PIBF1	Q8WXW3	757 aa		18.83	■□□□□ 0.6
SYNRG-223	ENST00000616179	GPATCH8	Q9UKJ3	1502 aa	Known RBP	18.83	■□□□□ 0.6
SYNRG-223	ENST00000616179	OS9	Q13438	667 aa	Predicted RBP	18.83	■□□□□ 0.6
SYNRG-223	ENST00000616179	TWISTNB	Q3B726	338 aa	Predicted RBP	18.82	■□□□□ 0.6
SYNRG-223	ENST00000616179	SDS	P20132	328 aa		18.82	■□□□□ 0.6
SYNRG-223	ENST00000616179	TNNT1	P13805	278 aa		18.81	■□□□□ 0.6
SYNRG-223	ENST00000616179	GORAB	Q5T7V8	394 aa		18.81	■□□□□ 0.6
SYNRG-223	ENST00000616179	UTP14C	Q5TAP6	766 aa	Known RBP	18.81	■□□□□ 0.6
SYNRG-223	ENST00000616179	STAG3	Q9UJ98	1225 aa		18.81	■□□□□ 0.6
SYNRG-223	ENST00000616179	MAP4K4	O95819	1239 aa	Predicted RBP	18.8	■□□□□ 0.6
SYNRG-223	ENST00000616179	GGT6	Q6P531	493 aa		18.8	■□□□□ 0.6
SYNRG-223	ENST00000616179	USP26	Q9BXU7	913 aa		18.8	■□□□□ 0.6
SYNRG-223	ENST00000616179	ATP6V1D	Q9Y5K8	247 aa		18.8	■□□□□ 0.6
SYNRG-223	ENST00000616179	WDR33	Q9C0J8	1336 aa	Known RBP	18.8	■□□□□ 0.6
SYNRG-223	ENST00000616179	GOLGA6L19	H0YKK7	550 aa		18.8	■□□□□ 0.6

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