RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 CAGE1Q8TC20 777 aa15.95■□□□□ 0.14
NLRC3-204ENST00000615877 RBM5P52756 815 aaKnown RBP eCLIP15.95■□□□□ 0.14
NLRC3-204ENST00000615877 RABEP1Q15276 862 aa15.95■□□□□ 0.14
NLRC3-204ENST00000615877 BACH2Q9BYV9 841 aa15.95■□□□□ 0.14
NLRC3-204ENST00000615877 GRPEL1Q9HAV7 217 aa15.94■□□□□ 0.14
NLRC3-204ENST00000615877 SMC2O95347 1197 aa15.94■□□□□ 0.14
NLRC3-204ENST00000615877 CNTROBQ8N137 903 aa15.94■□□□□ 0.14
NLRC3-204ENST00000615877 BRMS1Q9HCU9 246 aa15.94■□□□□ 0.14
NLRC3-204ENST00000615877 AKNAQ7Z591 1439 aa15.94■□□□□ 0.14
NLRC3-204ENST00000615877 H0YHG0 523 aa15.94■□□□□ 0.14
NLRC3-204ENST00000615877 CCP110O43303 1012 aa15.94■□□□□ 0.14
NLRC3-204ENST00000615877 MCM2P49736 904 aa15.93■□□□□ 0.14
NLRC3-204ENST00000615877 NEK4P51957 841 aa15.93■□□□□ 0.14
NLRC3-204ENST00000615877 GGNBP2Q9H3C7 697 aa15.93■□□□□ 0.14
NLRC3-204ENST00000615877 SPC24Q8NBT2 197 aa15.92■□□□□ 0.14
NLRC3-204ENST00000615877 FGD6Q6ZV73 1430 aa15.92■□□□□ 0.14
NLRC3-204ENST00000615877 OFD1O75665 1012 aa15.92■□□□□ 0.14
NLRC3-204ENST00000615877 CUX1P39880 1505 aa15.91■□□□□ 0.14
NLRC3-204ENST00000615877 ABTB2Q8N961 1025 aa15.91■□□□□ 0.14
NLRC3-204ENST00000615877 NLRP6P59044 892 aa15.91■□□□□ 0.14
NLRC3-204ENST00000615877 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
NLRC3-204ENST00000615877 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
NLRC3-204ENST00000615877 UBTFL1P0CB47 393 aaPredicted RBP15.91■□□□□ 0.14
NLRC3-204ENST00000615877 LEKR1Q6ZMV7 388 aa15.91■□□□□ 0.14
NLRC3-204ENST00000615877 KINO60870 393 aaKnown RBP15.9■□□□□ 0.14
NLRC3-204ENST00000615877 RDXP35241 583 aaKnown RBP15.9■□□□□ 0.14
NLRC3-204ENST00000615877 DDX54Q8TDD1 881 aaKnown RBP15.9■□□□□ 0.14
NLRC3-204ENST00000615877 UQCRHLA0A096LP55 91 aa15.9■□□□□ 0.14
NLRC3-204ENST00000615877 UQCRHP07919 91 aa15.9■□□□□ 0.14
NLRC3-204ENST00000615877 MYOM3Q5VTT5 1437 aa15.9■□□□□ 0.14
NLRC3-204ENST00000615877 DCTN1Q14203 1278 aa15.9■□□□□ 0.14
NLRC3-204ENST00000615877 TMEM132EQ6IEE7 984 aa15.9■□□□□ 0.14
NLRC3-204ENST00000615877 CDK5RAP3Q96JB5 506 aa15.9■□□□□ 0.14
NLRC3-204ENST00000615877 CNNM1Q9NRU3 951 aa15.89■□□□□ 0.14
NLRC3-204ENST00000615877 FSD1Q9BTV5 496 aa15.89■□□□□ 0.13
NLRC3-204ENST00000615877 FIBPO43427 364 aa15.89■□□□□ 0.13
NLRC3-204ENST00000615877 TTC39AQ5SRH9 613 aa15.89■□□□□ 0.13
NLRC3-204ENST00000615877 BRPF1P55201 1214 aaPredicted RBP15.89■□□□□ 0.13
NLRC3-204ENST00000615877 PDE3AQ14432 1141 aa15.89■□□□□ 0.13
NLRC3-204ENST00000615877 GCC1Q96CN9 775 aa15.89■□□□□ 0.13
NLRC3-204ENST00000615877 KRT18P05783 430 aaKnown RBP15.88■□□□□ 0.13
NLRC3-204ENST00000615877 CCDC191Q8NCU4 936 aa15.88■□□□□ 0.13
NLRC3-204ENST00000615877 K7ELQ4 463 aaPredicted RBP15.88■□□□□ 0.13
NLRC3-204ENST00000615877 TCP11L2Q8N4U5 519 aa15.87■□□□□ 0.13
NLRC3-204ENST00000615877 TBC1D2BQ9UPU7 963 aa15.87■□□□□ 0.13
NLRC3-204ENST00000615877 XBP1P17861 261 aa15.87■□□□□ 0.13
NLRC3-204ENST00000615877 PDCP20941 246 aa15.87■□□□□ 0.13
NLRC3-204ENST00000615877 PPP2R1AP30153 589 aa15.87■□□□□ 0.13
NLRC3-204ENST00000615877 SMARCE1Q969G3 411 aa15.87■□□□□ 0.13
NLRC3-204ENST00000615877 PTPRGP23470 1445 aa15.87■□□□□ 0.13
NLRC3-204ENST00000615877 RRP9O43818 475 aaKnown RBP15.86■□□□□ 0.13
NLRC3-204ENST00000615877 FMNL2Q96PY5 1086 aa15.86■□□□□ 0.13
NLRC3-204ENST00000615877 ZHX3Q9H4I2 956 aa15.86■□□□□ 0.13
NLRC3-204ENST00000615877 SMG6Q86US8 1419 aaKnown RBP15.86■□□□□ 0.13
NLRC3-204ENST00000615877 CCDC192P0DO97 292 aa15.86■□□□□ 0.13
NLRC3-204ENST00000615877 CEBPZQ03701 1054 aaKnown RBP15.86■□□□□ 0.13
NLRC3-204ENST00000615877 C1orf115Q9H7X2 142 aa15.86■□□□□ 0.13
NLRC3-204ENST00000615877 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
NLRC3-204ENST00000615877 PROSER2Q86WR7 435 aaPredicted RBP15.86■□□□□ 0.13
NLRC3-204ENST00000615877 CCDC112Q8NEF3 446 aa15.85■□□□□ 0.13
NLRC3-204ENST00000615877 ZNF396Q96N95 335 aaPredicted RBP15.85■□□□□ 0.13
NLRC3-204ENST00000615877 CHMP4BP1P59074 171 aa15.85■□□□□ 0.13
NLRC3-204ENST00000615877 EXOSC9Q06265 439 aaKnown RBP15.85■□□□□ 0.13
NLRC3-204ENST00000615877 BICDL1Q6ZP65 573 aa15.85■□□□□ 0.13
NLRC3-204ENST00000615877 BCAR3O75815 825 aa15.85■□□□□ 0.13
NLRC3-204ENST00000615877 MAP4K4O95819 1239 aaPredicted RBP15.85■□□□□ 0.13
NLRC3-204ENST00000615877 FILIP1LQ4L180 1135 aa15.85■□□□□ 0.13
NLRC3-204ENST00000615877 KIF21BO75037 1637 aa15.84■□□□□ 0.13
NLRC3-204ENST00000615877 NOB1Q9ULX3 412 aaKnown RBP15.84■□□□□ 0.13
NLRC3-204ENST00000615877 GNAI3P08754 354 aa15.84■□□□□ 0.13
NLRC3-204ENST00000615877 AXDND1Q5T1B0 1012 aaPredicted RBP15.84■□□□□ 0.13
NLRC3-204ENST00000615877 CADPSQ9ULU8 1353 aa15.84■□□□□ 0.13
NLRC3-204ENST00000615877 MTHFSP49914 203 aa15.84■□□□□ 0.13
NLRC3-204ENST00000615877 SIL1Q9H173 461 aa15.84■□□□□ 0.13
NLRC3-204ENST00000615877 ESPNB1AK53 854 aa15.83■□□□□ 0.13
NLRC3-204ENST00000615877 MYL6BP14649 208 aa15.83■□□□□ 0.13
NLRC3-204ENST00000615877 MPNDQ8N594 471 aa15.83■□□□□ 0.12
NLRC3-204ENST00000615877 MYO6Q9UM54 1294 aa15.83■□□□□ 0.12
NLRC3-204ENST00000615877 LRRC9Q6ZRR7 1453 aa15.83■□□□□ 0.12
NLRC3-204ENST00000615877 SURF6O75683 361 aaKnown RBP15.83■□□□□ 0.12
NLRC3-204ENST00000615877 CLASRPQ8N2M8 674 aaKnown RBP15.83■□□□□ 0.12
NLRC3-204ENST00000615877 TSPYL1Q9H0U9 437 aa15.83■□□□□ 0.12
NLRC3-204ENST00000615877 TNMDQ9H2S6 317 aa15.83■□□□□ 0.12
NLRC3-204ENST00000615877 HIP1O00291 1037 aa15.83■□□□□ 0.12
NLRC3-204ENST00000615877 SART3Q15020 963 aaKnown RBP15.83■□□□□ 0.12
NLRC3-204ENST00000615877 TOM1L2Q6ZVM7 507 aa15.83■□□□□ 0.12
NLRC3-204ENST00000615877 SLC3A2P08195 630 aaKnown RBP15.82■□□□□ 0.12
NLRC3-204ENST00000615877 SYCP1Q15431 976 aa15.82■□□□□ 0.12
NLRC3-204ENST00000615877 WDR33Q9C0J8 1336 aaKnown RBP15.82■□□□□ 0.12
NLRC3-204ENST00000615877 MCM4P33991 863 aa15.82■□□□□ 0.12
NLRC3-204ENST00000615877 MATR3P43243 847 aaKnown RBP eCLIP15.82■□□□□ 0.12
NLRC3-204ENST00000615877 AEBP1Q8IUX7 1158 aa15.82■□□□□ 0.12
NLRC3-204ENST00000615877 DHX8Q14562 1220 aaKnown RBP15.82■□□□□ 0.12
NLRC3-204ENST00000615877 GPRASP1Q5JY77 1395 aa15.82■□□□□ 0.12
NLRC3-204ENST00000615877 ZSCAN29Q8IWY8 852 aaPredicted RBP15.82■□□□□ 0.12
NLRC3-204ENST00000615877 STAC3Q96MF2 364 aa15.82■□□□□ 0.12
NLRC3-204ENST00000615877 CABP4P57796 275 aa15.81■□□□□ 0.12
NLRC3-204ENST00000615877 STK38Q15208 465 aa15.81■□□□□ 0.12
NLRC3-204ENST00000615877 PIBF1Q8WXW3 757 aa15.81■□□□□ 0.12
NLRC3-204ENST00000615877 SERPINC1P01008 464 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms