RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 WASLO00401 505 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF9-204ENST00000615230 DZIP1LQ8IYY4 767 aaKnown RBP11.92□□□□□ -0.5
TNFRSF9-204ENST00000615230 KIF7Q2M1P5 1343 aa11.92□□□□□ -0.5
TNFRSF9-204ENST00000615230 HMOX1P09601 288 aa11.92□□□□□ -0.5
TNFRSF9-204ENST00000615230 ZKSCAN1P17029 563 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF9-204ENST00000615230 CENPQQ7L2Z9 268 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF9-204ENST00000615230 ZBED9Q6R2W3 1325 aa11.92□□□□□ -0.5
TNFRSF9-204ENST00000615230 KRT28Q7Z3Y7 464 aa11.92□□□□□ -0.5
TNFRSF9-204ENST00000615230 B4GALNT3Q6L9W6 998 aa11.92□□□□□ -0.5
TNFRSF9-204ENST00000615230 DDX54Q8TDD1 881 aaKnown RBP11.92□□□□□ -0.5
TNFRSF9-204ENST00000615230 SCAF11Q99590 1463 aaKnown RBP11.91□□□□□ -0.5
TNFRSF9-204ENST00000615230 NAIPQ13075 1403 aa11.91□□□□□ -0.5
TNFRSF9-204ENST00000615230 SENP3-EIF4A1A0A087X0R7 540 aa11.91□□□□□ -0.5
TNFRSF9-204ENST00000615230 ZPR1O75312 459 aa11.91□□□□□ -0.5
TNFRSF9-204ENST00000615230 APAF1O14727 1248 aa11.9□□□□□ -0.5
TNFRSF9-204ENST00000615230 REC8O95072 547 aa11.9□□□□□ -0.5
TNFRSF9-204ENST00000615230 PPP1R1BQ9UD71 204 aaPredicted RBP11.9□□□□□ -0.5
TNFRSF9-204ENST00000615230 EXOC5O00471 708 aa11.9□□□□□ -0.5
TNFRSF9-204ENST00000615230 ZSCAN25Q6NSZ9 544 aa11.9□□□□□ -0.5
TNFRSF9-204ENST00000615230 ATP6V1DQ9Y5K8 247 aa11.9□□□□□ -0.5
TNFRSF9-204ENST00000615230 TPM2P07951 284 aa11.9□□□□□ -0.5
TNFRSF9-204ENST00000615230 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.9□□□□□ -0.51
TNFRSF9-204ENST00000615230 CCT4P50991 539 aaKnown RBP11.89□□□□□ -0.51
TNFRSF9-204ENST00000615230 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
TNFRSF9-204ENST00000615230 FCHSD2O94868 740 aa11.89□□□□□ -0.51
TNFRSF9-204ENST00000615230 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
TNFRSF9-204ENST00000615230 TRPM2O94759 1503 aa11.89□□□□□ -0.51
TNFRSF9-204ENST00000615230 CFAP43Q8NDM7 1665 aa11.89□□□□□ -0.51
TNFRSF9-204ENST00000615230 CCDC158Q5M9N0 1113 aa11.89□□□□□ -0.51
TNFRSF9-204ENST00000615230 GNAT3A8MTJ3 354 aa11.88□□□□□ -0.51
TNFRSF9-204ENST00000615230 NOS1P29475 1434 aa11.88□□□□□ -0.51
TNFRSF9-204ENST00000615230 CCAR1Q8IX12 1150 aaKnown RBP11.88□□□□□ -0.51
TNFRSF9-204ENST00000615230 APPP05067 770 aa11.88□□□□□ -0.51
TNFRSF9-204ENST00000615230 PRKAR2BP31323 418 aa11.88□□□□□ -0.51
TNFRSF9-204ENST00000615230 CDCA7Q9BWT1 371 aaPredicted RBP11.88□□□□□ -0.51
TNFRSF9-204ENST00000615230 FAM184AQ8NB25 1140 aa11.88□□□□□ -0.51
TNFRSF9-204ENST00000615230 PPP2R1AP30153 589 aa11.88□□□□□ -0.51
TNFRSF9-204ENST00000615230 AIMP1Q12904 312 aaKnown RBP11.88□□□□□ -0.51
TNFRSF9-204ENST00000615230 RILPL2Q969X0 211 aa11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 C14orf93Q9H972 538 aaKnown RBP11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 BRMS1Q9HCU9 246 aa11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 ELL2O00472 640 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 CNNM1Q9NRU3 951 aa11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 SART3Q15020 963 aaKnown RBP11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 H3BQV1 296 aa11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 IDI1Q13907 227 aa11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 WDR63Q8IWG1 891 aa11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 SMARCC1Q92922 1105 aaPredicted RBP11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
TNFRSF9-204ENST00000615230 XBP1P17861 261 aa11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 CEBPAP49715 358 aaPredicted RBP11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 TCOF1Q13428 1488 aaKnown RBP11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 ANKRD45Q5TZF3 282 aa11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 RPRD2Q5VT52 1461 aaKnown RBP11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 NBPF8Q3BBV2 869 aa11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 NBPF14Q5TI25 921 aa11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 PHF14O94880 888 aa11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 LRRC59Q96AG4 307 aaKnown RBP11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 TMOD2Q9NZR1 351 aa11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 NSD3Q9BZ95 1437 aa11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 DHX16O60231 1041 aaKnown RBP11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 CCDC43Q96MW1 224 aaKnown RBP11.86□□□□□ -0.51
TNFRSF9-204ENST00000615230 IGHMBP2P38935 993 aaKnown RBP11.85□□□□□ -0.51
TNFRSF9-204ENST00000615230 CCDC27Q2M243 656 aa11.85□□□□□ -0.51
TNFRSF9-204ENST00000615230 TTC39AQ5SRH9 613 aa11.85□□□□□ -0.51
TNFRSF9-204ENST00000615230 FBXO31Q5XUX0 539 aaPredicted RBP11.85□□□□□ -0.51
TNFRSF9-204ENST00000615230 HOOK1Q9UJC3 728 aaKnown RBP11.85□□□□□ -0.51
TNFRSF9-204ENST00000615230 ATP7AQ04656 1500 aa11.85□□□□□ -0.51
TNFRSF9-204ENST00000615230 ZMYM3Q14202 1370 aa11.85□□□□□ -0.51
TNFRSF9-204ENST00000615230 MAGI2Q86UL8 1455 aa11.85□□□□□ -0.51
TNFRSF9-204ENST00000615230 ABCC11Q96J66 1382 aa11.84□□□□□ -0.51
TNFRSF9-204ENST00000615230 CNTROBQ8N137 903 aa11.84□□□□□ -0.51
TNFRSF9-204ENST00000615230 C19orf44Q9H6X5 657 aa11.84□□□□□ -0.51
TNFRSF9-204ENST00000615230 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
TNFRSF9-204ENST00000615230 SF3A1Q15459 793 aaKnown RBP11.84□□□□□ -0.51
TNFRSF9-204ENST00000615230 NFXL1Q6ZNB6 911 aa11.84□□□□□ -0.51
TNFRSF9-204ENST00000615230 AK7Q96M32 723 aa11.84□□□□□ -0.51
TNFRSF9-204ENST00000615230 RAD21O60216 631 aa11.83□□□□□ -0.51
TNFRSF9-204ENST00000615230 ADAMTS2O95450 1211 aa11.83□□□□□ -0.51
TNFRSF9-204ENST00000615230 NECTIN2Q92692 538 aa11.83□□□□□ -0.51
TNFRSF9-204ENST00000615230 MPHOSPH8Q99549 860 aa11.83□□□□□ -0.51
TNFRSF9-204ENST00000615230 NEUROD6Q96NK8 337 aa11.83□□□□□ -0.52
TNFRSF9-204ENST00000615230 PUS7Q96PZ0 661 aaKnown RBP11.83□□□□□ -0.52
TNFRSF9-204ENST00000615230 RALYLQ86SE5 291 aaKnown RBP11.83□□□□□ -0.52
TNFRSF9-204ENST00000615230 SLF2Q8IX21 1173 aa11.83□□□□□ -0.52
TNFRSF9-204ENST00000615230 PSMA5P28066 241 aa11.83□□□□□ -0.52
TNFRSF9-204ENST00000615230 INTS3Q68E01 1043 aaKnown RBP11.83□□□□□ -0.52
TNFRSF9-204ENST00000615230 ANKRD36BQ8N2N9 1353 aa11.83□□□□□ -0.52
TNFRSF9-204ENST00000615230 MAPKBP1O60336 1514 aa11.83□□□□□ -0.52
TNFRSF9-204ENST00000615230 CPLX1O14810 134 aa11.83□□□□□ -0.52
TNFRSF9-204ENST00000615230 ZC3H6P61129 1189 aaKnown RBP11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 CCDC57Q2TAC2 916 aa11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 TWISTNBQ3B726 338 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 WWC2Q6AWC2 1192 aa11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 RRP1P56182 461 aaKnown RBP11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 SAFBQ15424 915 aaKnown RBP eCLIP11.82□□□□□ -0.52
TNFRSF9-204ENST00000615230 CLASRPQ8N2M8 674 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms