RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 TRMT2AQ8IZ69 625 aaKnown RBP25.13■■□□□ 1.61
MMP28-204ENST00000615136 RUNDC1Q96C34 613 aa25.13■■□□□ 1.61
MMP28-204ENST00000615136 ZRANB1Q9UGI0 708 aa25.13■■□□□ 1.61
MMP28-204ENST00000615136 NUTM2FA1L443 756 aa25.13■■□□□ 1.61
MMP28-204ENST00000615136 NME9Q86XW9 330 aa25.12■■□□□ 1.61
MMP28-204ENST00000615136 EDC4Q6P2E9 1401 aaKnown RBP25.12■■□□□ 1.61
MMP28-204ENST00000615136 MON2Q7Z3U7 1717 aa25.12■■□□□ 1.61
MMP28-204ENST00000615136 U2AF1L5P0DN76 240 aaPredicted RBP25.12■■□□□ 1.61
MMP28-204ENST00000615136 U2AF1Q01081 240 aaKnown RBP eCLIP25.12■■□□□ 1.61
MMP28-204ENST00000615136 NEUROD2Q15784 382 aa25.12■■□□□ 1.61
MMP28-204ENST00000615136 TCP11L2Q8N4U5 519 aa25.12■■□□□ 1.61
MMP28-204ENST00000615136 ADAMTSL3P82987 1691 aa25.11■■□□□ 1.61
MMP28-204ENST00000615136 AKAP12Q02952 1782 aa25.11■■□□□ 1.61
MMP28-204ENST00000615136 WWC1Q8IX03 1113 aa25.1■■□□□ 1.61
MMP28-204ENST00000615136 EXOC6Q8TAG9 804 aa25.09■■□□□ 1.61
MMP28-204ENST00000615136 ITSN1Q15811 1721 aa25.08■■□□□ 1.61
MMP28-204ENST00000615136 TOPAZ1Q8N9V7 1692 aa25.08■■□□□ 1.6
MMP28-204ENST00000615136 DIP2AQ14689 1571 aa25.07■■□□□ 1.6
MMP28-204ENST00000615136 U2SURPO15042 1029 aaKnown RBP25.07■■□□□ 1.6
MMP28-204ENST00000615136 PNPLA6Q8IY17 1366 aa25.06■■□□□ 1.6
MMP28-204ENST00000615136 NKTRP30414 1462 aaKnown RBP25.06■■□□□ 1.6
MMP28-204ENST00000615136 POLKQ9UBT6 870 aa25.06■■□□□ 1.6
MMP28-204ENST00000615136 PTCH1Q13635 1447 aa25.05■■□□□ 1.6
MMP28-204ENST00000615136 XRN1Q8IZH2 1706 aaKnown RBP25.05■■□□□ 1.6
MMP28-204ENST00000615136 MAP2P11137 1827 aaKnown RBP25.05■■□□□ 1.6
MMP28-204ENST00000615136 NGEFQ8N5V2 710 aa25.05■■□□□ 1.6
MMP28-204ENST00000615136 PHF23Q9BUL5 403 aaPredicted RBP25.05■■□□□ 1.6
MMP28-204ENST00000615136 MSH5O43196 834 aa25.04■■□□□ 1.6
MMP28-204ENST00000615136 E9PSI1 815 aa25.03■■□□□ 1.6
MMP28-204ENST00000615136 PPM1GO15355 546 aaPredicted RBP25.03■■□□□ 1.6
MMP28-204ENST00000615136 PLEKHF1Q96S99 279 aa25.02■■□□□ 1.6
MMP28-204ENST00000615136 ACEP12821 1306 aa25.02■■□□□ 1.6
MMP28-204ENST00000615136 KCNA6P17658 529 aa25.02■■□□□ 1.6
MMP28-204ENST00000615136 C20orf194Q5TEA3 1177 aa25.02■■□□□ 1.6
MMP28-204ENST00000615136 EMILIN1Q9Y6C2 1016 aa25.02■■□□□ 1.6
MMP28-204ENST00000615136 ZNF142P52746 1687 aaPredicted RBP25.01■■□□□ 1.59
MMP28-204ENST00000615136 DIAPH1O60610 1272 aaKnown RBP25.01■■□□□ 1.59
MMP28-204ENST00000615136 NRKQ7Z2Y5 1582 aa25■■□□□ 1.59
MMP28-204ENST00000615136 ZNF692Q9BU19 519 aaPredicted RBP24.99■■□□□ 1.59
MMP28-204ENST00000615136 RGPD8O14715 1765 aaPredicted RBP24.99■■□□□ 1.59
MMP28-204ENST00000615136 PLEKHG3A1L390 1219 aa24.98■■□□□ 1.59
MMP28-204ENST00000615136 COG3Q96JB2 828 aa24.96■■□□□ 1.59
MMP28-204ENST00000615136 CRBNQ96SW2 442 aa24.96■■□□□ 1.59
MMP28-204ENST00000615136 TTC21BQ7Z4L5 1316 aa24.96■■□□□ 1.59
MMP28-204ENST00000615136 RRS1Q15050 365 aaKnown RBP24.95■■□□□ 1.58
MMP28-204ENST00000615136 CCDC27Q2M243 656 aa24.95■■□□□ 1.58
MMP28-204ENST00000615136 PMFBP1Q8TBY8 1022 aa24.95■■□□□ 1.58
MMP28-204ENST00000615136 ANKLE2Q86XL3 938 aa24.95■■□□□ 1.58
MMP28-204ENST00000615136 USP6P35125 1406 aa24.95■■□□□ 1.58
MMP28-204ENST00000615136 BCAR3O75815 825 aa24.94■■□□□ 1.58
MMP28-204ENST00000615136 AATKQ6ZMQ8 1374 aa24.93■■□□□ 1.58
MMP28-204ENST00000615136 TMPOP42166 694 aaKnown RBP24.92■■□□□ 1.58
MMP28-204ENST00000615136 WDR63Q8IWG1 891 aa24.92■■□□□ 1.58
MMP28-204ENST00000615136 LRRC7Q96NW7 1537 aa24.92■■□□□ 1.58
MMP28-204ENST00000615136 PIK3R4Q99570 1358 aa24.92■■□□□ 1.58
MMP28-204ENST00000615136 SETD1BQ9UPS6 1966 aaKnown RBP24.92■■□□□ 1.58
MMP28-204ENST00000615136 SSH2Q76I76 1423 aa24.91■■□□□ 1.58
MMP28-204ENST00000615136 RBM33Q96EV2 1170 aaKnown RBP24.9■■□□□ 1.58
MMP28-204ENST00000615136 TRIM35Q9UPQ4 493 aa24.9■■□□□ 1.58
MMP28-204ENST00000615136 CHD2O14647 1828 aaKnown RBP24.9■■□□□ 1.58
MMP28-204ENST00000615136 CDK12Q9NYV4 1490 aaPredicted RBP24.9■■□□□ 1.58
MMP28-204ENST00000615136 IL13P35225 146 aa24.89■■□□□ 1.57
MMP28-204ENST00000615136 RSPH6AQ9H0K4 717 aa24.89■■□□□ 1.57
MMP28-204ENST00000615136 OVOS2A0A0J9YW53 1432 aa24.89■■□□□ 1.57
MMP28-204ENST00000615136 OVOS2Q6IE36 1432 aa24.89■■□□□ 1.57
MMP28-204ENST00000615136 MAPK8IP3Q9UPT6 1336 aa24.88■■□□□ 1.57
MMP28-204ENST00000615136 NCBP3Q53F19 620 aaKnown RBP24.88■■□□□ 1.57
MMP28-204ENST00000615136 HMOX1P09601 288 aa24.88■■□□□ 1.57
MMP28-204ENST00000615136 PRKAR2BP31323 418 aa24.86■■□□□ 1.57
MMP28-204ENST00000615136 FCHSD2O94868 740 aa24.86■■□□□ 1.57
MMP28-204ENST00000615136 NALCNQ8IZF0 1738 aa24.85■■□□□ 1.57
MMP28-204ENST00000615136 FMN2Q9NZ56 1722 aa24.85■■□□□ 1.57
MMP28-204ENST00000615136 RIPK4P57078 832 aa24.84■■□□□ 1.57
MMP28-204ENST00000615136 PHACTR3Q96KR7 559 aa24.84■■□□□ 1.57
MMP28-204ENST00000615136 NGDNQ8NEJ9 315 aaKnown RBP24.83■■□□□ 1.57
MMP28-204ENST00000615136 TCERG1O14776 1098 aaKnown RBP24.83■■□□□ 1.56
MMP28-204ENST00000615136 TSR2Q969E8 191 aaKnown RBP24.83■■□□□ 1.56
MMP28-204ENST00000615136 PEAK1Q9H792 1746 aa24.81■■□□□ 1.56
MMP28-204ENST00000615136 SOX12O15370 315 aa24.81■■□□□ 1.56
MMP28-204ENST00000615136 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.81■■□□□ 1.56
MMP28-204ENST00000615136 NPHP4O75161 1426 aaPredicted RBP24.8■■□□□ 1.56
MMP28-204ENST00000615136 ANKARQ7Z5J8 1434 aa24.8■■□□□ 1.56
MMP28-204ENST00000615136 USP31Q70CQ4 1352 aa24.79■■□□□ 1.56
MMP28-204ENST00000615136 RARSP54136 660 aaKnown RBP24.79■■□□□ 1.56
MMP28-204ENST00000615136 PIK3C2AO00443 1686 aa24.78■■□□□ 1.56
MMP28-204ENST00000615136 PNNQ9H307 717 aaKnown RBP24.78■■□□□ 1.56
MMP28-204ENST00000615136 MYH16Q9H6N6 1097 aa24.78■■□□□ 1.56
MMP28-204ENST00000615136 TTC21AQ8NDW8 1320 aa24.77■■□□□ 1.56
MMP28-204ENST00000615136 MS4A1P11836 297 aa24.76■■□□□ 1.55
MMP28-204ENST00000615136 BCL2L13Q9BXK5 485 aa24.76■■□□□ 1.55
MMP28-204ENST00000615136 EIF4A2Q14240 407 aaKnown RBP24.76■■□□□ 1.55
MMP28-204ENST00000615136 ERICH6Q7L0X2 663 aa24.76■■□□□ 1.55
MMP28-204ENST00000615136 HSP90AB2PQ58FF8 381 aa24.75■■□□□ 1.55
MMP28-204ENST00000615136 AEBP1Q8IUX7 1158 aa24.73■■□□□ 1.55
MMP28-204ENST00000615136 EXOSC9Q06265 439 aaKnown RBP24.73■■□□□ 1.55
MMP28-204ENST00000615136 NFE2L2Q16236 605 aa24.73■■□□□ 1.55
MMP28-204ENST00000615136 KDM2BQ8NHM5 1336 aa24.73■■□□□ 1.55
MMP28-204ENST00000615136 TNNQ9UQP3 1299 aa24.73■■□□□ 1.55
MMP28-204ENST00000615136 FRAT1Q92837 279 aaPredicted RBP24.72■■□□□ 1.55
MMP28-204ENST00000615136 THUMPD2Q9BTF0 503 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms