RNA–Protein interactions for RNA: ENST00000613938.4

R3HCC1L-206, Transcript of R3H domain and coiled-coil containing 1 like, humanhuman

TSL 5 BASIC

Gene R3HCC1L, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1L-206ENST00000613938 FDX1P10109 184 aa13.05□□□□□ -0.32
R3HCC1L-206ENST00000613938 GJA5P36382 358 aa13.05□□□□□ -0.32
R3HCC1L-206ENST00000613938 BRICD5Q6PL45 260 aa13.05□□□□□ -0.32
R3HCC1L-206ENST00000613938 THAP11Q96EK4 314 aa13.05□□□□□ -0.32
R3HCC1L-206ENST00000613938 TSPOAP1O95153 1857 aa13.05□□□□□ -0.32
R3HCC1L-206ENST00000613938 KDM5BQ9UGL1 1544 aa13.04□□□□□ -0.32
R3HCC1L-206ENST00000613938 GLI2P10070 1586 aa13.04□□□□□ -0.32
R3HCC1L-206ENST00000613938 ZCCHC11Q5TAX3 1644 aaKnown RBP13.03□□□□□ -0.32
R3HCC1L-206ENST00000613938 MOXD2PA6NHM9 499 aa13.03□□□□□ -0.32
R3HCC1L-206ENST00000613938 TLL1O43897 1013 aa13.03□□□□□ -0.32
R3HCC1L-206ENST00000613938 PPP1R18Q6NYC8 613 aa13.03□□□□□ -0.32
R3HCC1L-206ENST00000613938 TTBK1Q5TCY1 1321 aaPredicted RBP13.03□□□□□ -0.32
R3HCC1L-206ENST00000613938 BRPF1P55201 1214 aaPredicted RBP13.02□□□□□ -0.33
R3HCC1L-206ENST00000613938 FAM9AQ8IZU1 332 aaPredicted RBP13.02□□□□□ -0.33
R3HCC1L-206ENST00000613938 HLA-CQ95604 372 aa13.02□□□□□ -0.33
R3HCC1L-206ENST00000613938 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.02□□□□□ -0.33
R3HCC1L-206ENST00000613938 ASXL2Q76L83 1435 aa13.02□□□□□ -0.33
R3HCC1L-206ENST00000613938 NDUFV2P19404 249 aa13.01□□□□□ -0.33
R3HCC1L-206ENST00000613938 FAM117AQ9C073 453 aa13.01□□□□□ -0.33
R3HCC1L-206ENST00000613938 SLC6A16Q9GZN6 736 aa13.01□□□□□ -0.33
R3HCC1L-206ENST00000613938 KDM6BO15054 1643 aa12.99□□□□□ -0.33
R3HCC1L-206ENST00000613938 GUCA2AQ02747 115 aa12.99□□□□□ -0.33
R3HCC1L-206ENST00000613938 RNF19BQ6ZMZ0 732 aa12.99□□□□□ -0.33
R3HCC1L-206ENST00000613938 RIC3Q7Z5B4 369 aa12.99□□□□□ -0.33
R3HCC1L-206ENST00000613938 ABCA8O94911 1581 aa12.99□□□□□ -0.33
R3HCC1L-206ENST00000613938 SPTLC1O15269 473 aa12.98□□□□□ -0.33
R3HCC1L-206ENST00000613938 RGS20O76081 388 aa12.98□□□□□ -0.33
R3HCC1L-206ENST00000613938 MYSM1Q5VVJ2 828 aa12.98□□□□□ -0.33
R3HCC1L-206ENST00000613938 RSBN1LQ6PCB5 846 aaPredicted RBP12.98□□□□□ -0.33
R3HCC1L-206ENST00000613938 USB1Q9BQ65 265 aaKnown RBP12.98□□□□□ -0.33
R3HCC1L-206ENST00000613938 MAP3K4Q9Y6R4 1608 aa12.97□□□□□ -0.33
R3HCC1L-206ENST00000613938 SAMD9Q5K651 1589 aa12.97□□□□□ -0.33
R3HCC1L-206ENST00000613938 KIF21BO75037 1637 aa12.97□□□□□ -0.33
R3HCC1L-206ENST00000613938 MSS51Q4VC12 460 aa12.96□□□□□ -0.33
R3HCC1L-206ENST00000613938 PCDHGC3Q9UN70 934 aa12.96□□□□□ -0.33
R3HCC1L-206ENST00000613938 EPRSP07814 1512 aaKnown RBP12.96□□□□□ -0.33
R3HCC1L-206ENST00000613938 PPRC1Q5VV67 1664 aaKnown RBP12.96□□□□□ -0.33
R3HCC1L-206ENST00000613938 SPDYE5A6NIY4 337 aa12.95□□□□□ -0.34
R3HCC1L-206ENST00000613938 C6orf229H3BNL8 230 aa12.95□□□□□ -0.34
R3HCC1L-206ENST00000613938 S1PR4O95977 384 aa12.95□□□□□ -0.34
R3HCC1L-206ENST00000613938 FAM160A2Q8N612 972 aaPredicted RBP12.95□□□□□ -0.34
R3HCC1L-206ENST00000613938 WDR7Q9Y4E6 1490 aa12.94□□□□□ -0.34
R3HCC1L-206ENST00000613938 TUSC1Q2TAM9 212 aa12.94□□□□□ -0.34
R3HCC1L-206ENST00000613938 TEX14Q8IWB6 1497 aa12.94□□□□□ -0.34
R3HCC1L-206ENST00000613938 MTMR2Q13614 643 aa12.94□□□□□ -0.34
R3HCC1L-206ENST00000613938 RETREG3Q86VR2 466 aa12.94□□□□□ -0.34
R3HCC1L-206ENST00000613938 CFAP43Q8NDM7 1665 aa12.93□□□□□ -0.34
R3HCC1L-206ENST00000613938 PLEKHG3A1L390 1219 aa12.93□□□□□ -0.34
R3HCC1L-206ENST00000613938 RNF223E7ERA6 249 aa12.93□□□□□ -0.34
R3HCC1L-206ENST00000613938 SKIV2LQ15477 1246 aaKnown RBP12.93□□□□□ -0.34
R3HCC1L-206ENST00000613938 PRPF38BQ5VTL8 546 aaKnown RBP12.93□□□□□ -0.34
R3HCC1L-206ENST00000613938 SH3D19Q5HYK7 790 aa12.92□□□□□ -0.34
R3HCC1L-206ENST00000613938 ANKLE1Q8NAG6 615 aa12.92□□□□□ -0.34
R3HCC1L-206ENST00000613938 IL27Q8NEV9 243 aa12.92□□□□□ -0.34
R3HCC1L-206ENST00000613938 SYMPKQ92797 1274 aaKnown RBP12.92□□□□□ -0.34
R3HCC1L-206ENST00000613938 CLK2P49760 499 aaKnown RBP12.91□□□□□ -0.34
R3HCC1L-206ENST00000613938 ZBTB3Q9H5J0 574 aa12.91□□□□□ -0.34
R3HCC1L-206ENST00000613938 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
R3HCC1L-206ENST00000613938 PCDHB15Q9Y5E8 787 aa12.91□□□□□ -0.34
R3HCC1L-206ENST00000613938 EFCAB5A4FU69 1503 aa12.9□□□□□ -0.34
R3HCC1L-206ENST00000613938 RAPGEF6Q8TEU7 1601 aa12.9□□□□□ -0.34
R3HCC1L-206ENST00000613938 LIMD1Q9UGP4 676 aa12.89□□□□□ -0.35
R3HCC1L-206ENST00000613938 MMP16P51512 607 aa12.88□□□□□ -0.35
R3HCC1L-206ENST00000613938 GOPCQ9HD26 462 aa12.88□□□□□ -0.35
R3HCC1L-206ENST00000613938 ATP1B4Q9UN42 357 aaPredicted RBP12.88□□□□□ -0.35
R3HCC1L-206ENST00000613938 PPEF1O14829 653 aaPredicted RBP12.87□□□□□ -0.35
R3HCC1L-206ENST00000613938 CSPP1Q1MSJ5 1256 aa12.87□□□□□ -0.35
R3HCC1L-206ENST00000613938 MAGI3Q5TCQ9 1506 aa12.86□□□□□ -0.35
R3HCC1L-206ENST00000613938 NUTM2BA6NNL0 878 aaPredicted RBP12.86□□□□□ -0.35
R3HCC1L-206ENST00000613938 NUTM2EB1AL46 878 aaPredicted RBP12.86□□□□□ -0.35
R3HCC1L-206ENST00000613938 HRCP23327 699 aa12.86□□□□□ -0.35
R3HCC1L-206ENST00000613938 NUTM2DQ5VT03 806 aaPredicted RBP12.86□□□□□ -0.35
R3HCC1L-206ENST00000613938 NUTM2AQ8IVF1 878 aaPredicted RBP12.86□□□□□ -0.35
R3HCC1L-206ENST00000613938 DXOO77932 396 aaKnown RBP12.85□□□□□ -0.35
R3HCC1L-206ENST00000613938 PRR7Q8TB68 274 aa12.85□□□□□ -0.35
R3HCC1L-206ENST00000613938 PRDM9Q9NQV7 894 aa12.85□□□□□ -0.35
R3HCC1L-206ENST00000613938 LILRB3O75022 631 aa12.84□□□□□ -0.35
R3HCC1L-206ENST00000613938 JUNDP17535 347 aa12.84□□□□□ -0.35
R3HCC1L-206ENST00000613938 V9GY48 417 aaPredicted RBP12.84□□□□□ -0.35
R3HCC1L-206ENST00000613938 ATP10BO94823 1461 aa12.84□□□□□ -0.35
R3HCC1L-206ENST00000613938 DESI1Q6ICB0 168 aa12.83□□□□□ -0.36
R3HCC1L-206ENST00000613938 CD109Q6YHK3 1445 aa12.83□□□□□ -0.36
R3HCC1L-206ENST00000613938 FCF1Q9Y324 198 aaKnown RBP12.82□□□□□ -0.36
R3HCC1L-206ENST00000613938 ABCA9Q8IUA7 1624 aa12.82□□□□□ -0.36
R3HCC1L-206ENST00000613938 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
R3HCC1L-206ENST00000613938 PCMTD1Q96MG8 357 aaPredicted RBP12.81□□□□□ -0.36
R3HCC1L-206ENST00000613938 PRKD2Q9BZL6 878 aa12.81□□□□□ -0.36
R3HCC1L-206ENST00000613938 QPCTQ16769 361 aa12.81□□□□□ -0.36
R3HCC1L-206ENST00000613938 FHOD3Q2V2M9 1422 aa12.8□□□□□ -0.36
R3HCC1L-206ENST00000613938 SLC19A1P41440 591 aa12.8□□□□□ -0.36
R3HCC1L-206ENST00000613938 PROCA1Q8NCQ7 364 aaPredicted RBP12.8□□□□□ -0.36
R3HCC1L-206ENST00000613938 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.8□□□□□ -0.36
R3HCC1L-206ENST00000613938 NUP153P49790 1475 aaKnown RBP12.79□□□□□ -0.36
R3HCC1L-206ENST00000613938 ZBTB24O43167 697 aaPredicted RBP12.78□□□□□ -0.36
R3HCC1L-206ENST00000613938 PHLDB1Q86UU1 1377 aa12.78□□□□□ -0.36
R3HCC1L-206ENST00000613938 CFAP99D6REC4 459 aa12.77□□□□□ -0.37
R3HCC1L-206ENST00000613938 UBTFP17480 764 aaKnown RBP12.77□□□□□ -0.37
R3HCC1L-206ENST00000613938 CCDC24Q8N4L8 307 aa12.77□□□□□ -0.37
R3HCC1L-206ENST00000613938 COL17A1Q9UMD9 1497 aaPredicted RBP12.77□□□□□ -0.37
R3HCC1L-206ENST00000613938 RPIAP49247 311 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms