RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 CD163L1Q9NR16 1453 aa18.02■□□□□ 0.48
SRGAP2C-204ENST00000613462 DDX17Q92841 729 aaKnown RBP18.02■□□□□ 0.48
SRGAP2C-204ENST00000613462 HDGFL2Q7Z4V5 671 aaPredicted RBP18.01■□□□□ 0.47
SRGAP2C-204ENST00000613462 ARHGEF10O15013 1369 aa18.01■□□□□ 0.47
SRGAP2C-204ENST00000613462 ANKRD36BQ8N2N9 1353 aa18.01■□□□□ 0.47
SRGAP2C-204ENST00000613462 LRP6O75581 1613 aa18.01■□□□□ 0.47
SRGAP2C-204ENST00000613462 ABCA3Q99758 1704 aa18.01■□□□□ 0.47
SRGAP2C-204ENST00000613462 UPF1Q92900 1129 aaKnown RBP eCLIP18■□□□□ 0.47
SRGAP2C-204ENST00000613462 KTN1Q86UP2 1357 aaKnown RBP18■□□□□ 0.47
SRGAP2C-204ENST00000613462 USP54Q70EL1 1684 aa17.99■□□□□ 0.47
SRGAP2C-204ENST00000613462 XPCQ01831 940 aaPredicted RBP17.99■□□□□ 0.47
SRGAP2C-204ENST00000613462 SLC12A5Q9H2X9 1139 aa17.99■□□□□ 0.47
SRGAP2C-204ENST00000613462 KIF20BQ96Q89 1820 aa17.99■□□□□ 0.47
SRGAP2C-204ENST00000613462 A0A1W2PP64 1363 aa17.99■□□□□ 0.47
SRGAP2C-204ENST00000613462 PIK3C2AO00443 1686 aa17.99■□□□□ 0.47
SRGAP2C-204ENST00000613462 KIF7Q2M1P5 1343 aa17.98■□□□□ 0.47
SRGAP2C-204ENST00000613462 SPATA31A3Q5VYP0 1347 aa17.98■□□□□ 0.47
SRGAP2C-204ENST00000613462 EDC4Q6P2E9 1401 aaKnown RBP17.98■□□□□ 0.47
SRGAP2C-204ENST00000613462 MARF1Q9Y4F3 1742 aaKnown RBP17.98■□□□□ 0.47
SRGAP2C-204ENST00000613462 CRYBG1Q9Y4K1 1723 aa17.98■□□□□ 0.47
SRGAP2C-204ENST00000613462 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
SRGAP2C-204ENST00000613462 PNPLA6Q8IY17 1366 aa17.97■□□□□ 0.47
SRGAP2C-204ENST00000613462 CCDC7Q96M83 1385 aa17.97■□□□□ 0.47
SRGAP2C-204ENST00000613462 POLR3GLQ9BT43 218 aa17.97■□□□□ 0.47
SRGAP2C-204ENST00000613462 C11orf95C9JLR9 678 aaPredicted RBP17.96■□□□□ 0.47
SRGAP2C-204ENST00000613462 SPATA31A6Q5VVP1 1343 aa17.96■□□□□ 0.46
SRGAP2C-204ENST00000613462 TTC21AQ8NDW8 1320 aa17.96■□□□□ 0.46
SRGAP2C-204ENST00000613462 PHRF1Q9P1Y6 1649 aaKnown RBP17.95■□□□□ 0.46
SRGAP2C-204ENST00000613462 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
SRGAP2C-204ENST00000613462 ANKRD26Q9UPS8 1709 aa17.93■□□□□ 0.46
SRGAP2C-204ENST00000613462 WASHC2AQ641Q2 1341 aa17.93■□□□□ 0.46
SRGAP2C-204ENST00000613462 TTC21BQ7Z4L5 1316 aa17.92■□□□□ 0.46
SRGAP2C-204ENST00000613462 LMOD2Q6P5Q4 547 aa17.91■□□□□ 0.46
SRGAP2C-204ENST00000613462 ABTB2Q8N961 1025 aa17.9■□□□□ 0.46
SRGAP2C-204ENST00000613462 NSD3Q9BZ95 1437 aa17.89■□□□□ 0.45
SRGAP2C-204ENST00000613462 SLIT3O75094 1523 aa17.88■□□□□ 0.45
SRGAP2C-204ENST00000613462 NLRP13Q86W25 1043 aa17.87■□□□□ 0.45
SRGAP2C-204ENST00000613462 USP31Q70CQ4 1352 aa17.87■□□□□ 0.45
SRGAP2C-204ENST00000613462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.86■□□□□ 0.45
SRGAP2C-204ENST00000613462 PANK3Q9H999 370 aa17.86■□□□□ 0.45
SRGAP2C-204ENST00000613462 USP19O94966 1318 aa17.86■□□□□ 0.45
SRGAP2C-204ENST00000613462 LTN1O94822 1766 aa17.85■□□□□ 0.45
SRGAP2C-204ENST00000613462 CDK12Q9NYV4 1490 aaPredicted RBP17.85■□□□□ 0.45
SRGAP2C-204ENST00000613462 OVOS2A0A0J9YW53 1432 aa17.84■□□□□ 0.45
SRGAP2C-204ENST00000613462 OVOS2Q6IE36 1432 aa17.84■□□□□ 0.45
SRGAP2C-204ENST00000613462 CGNL1Q0VF96 1302 aa17.84■□□□□ 0.45
SRGAP2C-204ENST00000613462 HAP1P54257 671 aaPredicted RBP17.84■□□□□ 0.45
SRGAP2C-204ENST00000613462 NLRP6P59044 892 aa17.84■□□□□ 0.45
SRGAP2C-204ENST00000613462 CARD14Q9BXL6 1004 aa17.84■□□□□ 0.45
SRGAP2C-204ENST00000613462 EP400Q96L91 3159 aa17.84■□□□□ 0.45
SRGAP2C-204ENST00000613462 COL14A1Q05707 1796 aaKnown RBP17.84■□□□□ 0.45
SRGAP2C-204ENST00000613462 NWD2Q9ULI1 1742 aa17.84■□□□□ 0.45
SRGAP2C-204ENST00000613462 NSD2O96028 1365 aa17.83■□□□□ 0.45
SRGAP2C-204ENST00000613462 ZNF772Q68DY9 489 aaPredicted RBP17.83■□□□□ 0.44
SRGAP2C-204ENST00000613462 PLCH1Q4KWH8 1693 aa17.83■□□□□ 0.44
SRGAP2C-204ENST00000613462 NUTM2BA6NNL0 878 aaPredicted RBP17.82■□□□□ 0.44
SRGAP2C-204ENST00000613462 NUTM2EB1AL46 878 aaPredicted RBP17.82■□□□□ 0.44
SRGAP2C-204ENST00000613462 NME9Q86XW9 330 aa17.82■□□□□ 0.44
SRGAP2C-204ENST00000613462 NUTM2AQ8IVF1 878 aaPredicted RBP17.82■□□□□ 0.44
SRGAP2C-204ENST00000613462 NUTM2GQ5VZR2 741 aa17.81■□□□□ 0.44
SRGAP2C-204ENST00000613462 KCNH5Q8NCM2 988 aa17.81■□□□□ 0.44
SRGAP2C-204ENST00000613462 KNSTRNQ9Y448 316 aa17.81■□□□□ 0.44
SRGAP2C-204ENST00000613462 NFAT5O94916 1531 aa17.81■□□□□ 0.44
SRGAP2C-204ENST00000613462 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.81■□□□□ 0.44
SRGAP2C-204ENST00000613462 CABLES1Q8TDN4 633 aa17.8■□□□□ 0.44
SRGAP2C-204ENST00000613462 COG3Q96JB2 828 aa17.8■□□□□ 0.44
SRGAP2C-204ENST00000613462 ABCC6O95255 1503 aa17.8■□□□□ 0.44
SRGAP2C-204ENST00000613462 FYB1O15117 783 aa17.79■□□□□ 0.44
SRGAP2C-204ENST00000613462 MEX3CQ5U5Q3 659 aaKnown RBP17.79■□□□□ 0.44
SRGAP2C-204ENST00000613462 CPDO75976 1380 aa17.79■□□□□ 0.44
SRGAP2C-204ENST00000613462 MAP2P11137 1827 aaKnown RBP17.78■□□□□ 0.44
SRGAP2C-204ENST00000613462 ZNF316A6NFI3 1004 aaPredicted RBP17.78■□□□□ 0.44
SRGAP2C-204ENST00000613462 GCP02774 474 aa17.77■□□□□ 0.44
SRGAP2C-204ENST00000613462 RXRBP28702 533 aa17.77■□□□□ 0.44
SRGAP2C-204ENST00000613462 NPC1L1Q9UHC9 1359 aa17.77■□□□□ 0.43
SRGAP2C-204ENST00000613462 NRAPQ86VF7 1730 aa17.76■□□□□ 0.43
SRGAP2C-204ENST00000613462 ADAMTS2O95450 1211 aa17.76■□□□□ 0.43
SRGAP2C-204ENST00000613462 LMO7Q8WWI1 1683 aa17.76■□□□□ 0.43
SRGAP2C-204ENST00000613462 RGS12O14924 1447 aa17.75■□□□□ 0.43
SRGAP2C-204ENST00000613462 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
SRGAP2C-204ENST00000613462 PLEKHG5O94827 1062 aa17.75■□□□□ 0.43
SRGAP2C-204ENST00000613462 GGNBP2Q9H3C7 697 aa17.75■□□□□ 0.43
SRGAP2C-204ENST00000613462 COL18A1P39060 1754 aa17.75■□□□□ 0.43
SRGAP2C-204ENST00000613462 RGPD5Q99666 1765 aa17.75■□□□□ 0.43
SRGAP2C-204ENST00000613462 ZRANB1Q9UGI0 708 aa17.74■□□□□ 0.43
SRGAP2C-204ENST00000613462 KIAA0232Q92628 1395 aa17.74■□□□□ 0.43
SRGAP2C-204ENST00000613462 SLIT2O94813 1529 aa17.73■□□□□ 0.43
SRGAP2C-204ENST00000613462 AMER1Q5JTC6 1135 aaPredicted RBP17.73■□□□□ 0.43
SRGAP2C-204ENST00000613462 C8orf37Q96NL8 207 aa17.73■□□□□ 0.43
SRGAP2C-204ENST00000613462 PRDM11Q9NQV5 511 aa17.73■□□□□ 0.43
SRGAP2C-204ENST00000613462 FAM208AQ9UK61 1670 aaKnown RBP17.72■□□□□ 0.43
SRGAP2C-204ENST00000613462 NGLY1Q96IV0 654 aa17.72■□□□□ 0.43
SRGAP2C-204ENST00000613462 AFF2P51816 1311 aa17.72■□□□□ 0.43
SRGAP2C-204ENST00000613462 ZC3H6P61129 1189 aaKnown RBP17.71■□□□□ 0.43
SRGAP2C-204ENST00000613462 KIF24Q5T7B8 1368 aa17.7■□□□□ 0.42
SRGAP2C-204ENST00000613462 AATKQ6ZMQ8 1374 aa17.7■□□□□ 0.42
SRGAP2C-204ENST00000613462 ARHGEF25Q86VW2 580 aa17.7■□□□□ 0.42
SRGAP2C-204ENST00000613462 FNBP4Q8N3X1 1017 aaPredicted RBP17.7■□□□□ 0.42
SRGAP2C-204ENST00000613462 RTL1A6NKG5 1358 aa17.69■□□□□ 0.42
SRGAP2C-204ENST00000613462 SOX12O15370 315 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms