RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 ABTB2Q8N961 1025 aa10.75□□□□□ -0.69
PDE6A-204ENST00000613228 COG6Q9Y2V7 657 aa10.75□□□□□ -0.69
PDE6A-204ENST00000613228 NKTRP30414 1462 aaKnown RBP10.74□□□□□ -0.69
PDE6A-204ENST00000613228 FBXO31Q5XUX0 539 aaPredicted RBP10.74□□□□□ -0.69
PDE6A-204ENST00000613228 TTC21BQ7Z4L5 1316 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 PTPRTO14522 1441 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 PLIN1O60240 522 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 NEXNQ0ZGT2 675 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 TAF7LQ5H9L4 462 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 RAPGEF4Q8WZA2 1011 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 IL16Q14005 1332 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 CCDC30Q5VVM6 783 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 CHMP4CQ96CF2 233 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 POLR3AO14802 1390 aaPredicted RBP10.74□□□□□ -0.69
PDE6A-204ENST00000613228 MSH5O43196 834 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 SLC4A10Q6U841 1118 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 GBP4Q96PP9 640 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 TTC21AQ8NDW8 1320 aa10.74□□□□□ -0.69
PDE6A-204ENST00000613228 NFE2L2Q16236 605 aa10.73□□□□□ -0.69
PDE6A-204ENST00000613228 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.73□□□□□ -0.69
PDE6A-204ENST00000613228 EVA1CP58658 441 aa10.73□□□□□ -0.69
PDE6A-204ENST00000613228 ESCO1Q5FWF5 840 aa10.73□□□□□ -0.69
PDE6A-204ENST00000613228 ARID3AQ99856 593 aa10.73□□□□□ -0.69
PDE6A-204ENST00000613228 LRPPRCP42704 1394 aaKnown RBP10.73□□□□□ -0.69
PDE6A-204ENST00000613228 HMOX1P09601 288 aa10.72□□□□□ -0.69
PDE6A-204ENST00000613228 TAF3Q5VWG9 929 aa10.72□□□□□ -0.69
PDE6A-204ENST00000613228 KDM6BO15054 1643 aa10.72□□□□□ -0.69
PDE6A-204ENST00000613228 ABCA9Q8IUA7 1624 aa10.72□□□□□ -0.69
PDE6A-204ENST00000613228 TESK2Q96S53 571 aa10.72□□□□□ -0.69
PDE6A-204ENST00000613228 ALDH1L2Q3SY69 923 aa10.71□□□□□ -0.69
PDE6A-204ENST00000613228 IFT57Q9NWB7 429 aa10.71□□□□□ -0.69
PDE6A-204ENST00000613228 NPHP1O15259 732 aa10.71□□□□□ -0.69
PDE6A-204ENST00000613228 LRRFIP1Q32MZ4 808 aaKnown RBP10.71□□□□□ -0.7
PDE6A-204ENST00000613228 WWC1Q8IX03 1113 aa10.71□□□□□ -0.7
PDE6A-204ENST00000613228 GCC1Q96CN9 775 aa10.71□□□□□ -0.7
PDE6A-204ENST00000613228 YTHDC2Q9H6S0 1430 aaKnown RBP10.71□□□□□ -0.7
PDE6A-204ENST00000613228 SBNO2Q9Y2G9 1366 aa10.71□□□□□ -0.7
PDE6A-204ENST00000613228 NCBP3Q53F19 620 aaKnown RBP10.71□□□□□ -0.7
PDE6A-204ENST00000613228 KDM5CP41229 1560 aa10.7□□□□□ -0.7
PDE6A-204ENST00000613228 ZMYM3Q14202 1370 aa10.7□□□□□ -0.7
PDE6A-204ENST00000613228 SIRT1Q96EB6 747 aa10.7□□□□□ -0.7
PDE6A-204ENST00000613228 KDM5AP29375 1690 aaKnown RBP10.7□□□□□ -0.7
PDE6A-204ENST00000613228 GNAI3P08754 354 aa10.7□□□□□ -0.7
PDE6A-204ENST00000613228 FGD1P98174 961 aa10.7□□□□□ -0.7
PDE6A-204ENST00000613228 SPATA31E1Q6ZUB1 1445 aa10.7□□□□□ -0.7
PDE6A-204ENST00000613228 ST18O60284 1047 aa10.7□□□□□ -0.7
PDE6A-204ENST00000613228 ANKRD45Q5TZF3 282 aa10.7□□□□□ -0.7
PDE6A-204ENST00000613228 CDCA7LQ96GN5 454 aa10.7□□□□□ -0.7
PDE6A-204ENST00000613228 MFAP1P55081 439 aaKnown RBP10.69□□□□□ -0.7
PDE6A-204ENST00000613228 TWISTNBQ3B726 338 aaPredicted RBP10.69□□□□□ -0.7
PDE6A-204ENST00000613228 CCDC184Q52MB2 194 aa10.69□□□□□ -0.7
PDE6A-204ENST00000613228 ZNF771Q7L3S4 317 aaPredicted RBP10.69□□□□□ -0.7
PDE6A-204ENST00000613228 AMOTL2Q9Y2J4 779 aa10.69□□□□□ -0.7
PDE6A-204ENST00000613228 TMPOP42166 694 aaKnown RBP10.69□□□□□ -0.7
PDE6A-204ENST00000613228 CCT4P50991 539 aaKnown RBP10.69□□□□□ -0.7
PDE6A-204ENST00000613228 EXOSC9Q06265 439 aaKnown RBP10.69□□□□□ -0.7
PDE6A-204ENST00000613228 CCDC27Q2M243 656 aa10.69□□□□□ -0.7
PDE6A-204ENST00000613228 BCL2L13Q9BXK5 485 aa10.69□□□□□ -0.7
PDE6A-204ENST00000613228 HTATSF1O43719 755 aaKnown RBP10.68□□□□□ -0.7
PDE6A-204ENST00000613228 ZRSR1Q15695 479 aaKnown RBP10.68□□□□□ -0.7
PDE6A-204ENST00000613228 REC8O95072 547 aa10.68□□□□□ -0.7
PDE6A-204ENST00000613228 RBM10P98175 930 aaKnown RBP10.68□□□□□ -0.7
PDE6A-204ENST00000613228 SPG7Q9UQ90 795 aa10.68□□□□□ -0.7
PDE6A-204ENST00000613228 TATP17735 454 aaPredicted RBP10.68□□□□□ -0.7
PDE6A-204ENST00000613228 CSPP1Q1MSJ5 1256 aa10.68□□□□□ -0.7
PDE6A-204ENST00000613228 RUFY2Q8WXA3 655 aa10.68□□□□□ -0.7
PDE6A-204ENST00000613228 SLC26A8Q96RN1 970 aa10.68□□□□□ -0.7
PDE6A-204ENST00000613228 SYNMO15061 1565 aa10.68□□□□□ -0.7
PDE6A-204ENST00000613228 WAPLQ7Z5K2 1190 aa10.68□□□□□ -0.7
PDE6A-204ENST00000613228 NPATQ14207 1427 aa10.67□□□□□ -0.7
PDE6A-204ENST00000613228 ARHGAP31Q2M1Z3 1444 aa10.67□□□□□ -0.7
PDE6A-204ENST00000613228 PPIP5K1Q6PFW1 1433 aa10.67□□□□□ -0.7
PDE6A-204ENST00000613228 PRDM15P57071 1507 aaPredicted RBP10.67□□□□□ -0.7
PDE6A-204ENST00000613228 FAM13BQ9NYF5 915 aa10.67□□□□□ -0.7
PDE6A-204ENST00000613228 TRIM6-TRIM34B2RNG4 842 aa10.67□□□□□ -0.7
PDE6A-204ENST00000613228 FKBP5Q13451 457 aaPredicted RBP10.67□□□□□ -0.7
PDE6A-204ENST00000613228 MVPQ14764 893 aaKnown RBP10.67□□□□□ -0.7
PDE6A-204ENST00000613228 SULT6B1Q6IMI4 303 aa10.67□□□□□ -0.7
PDE6A-204ENST00000613228 ERCC6L2Q5T890 1561 aa10.67□□□□□ -0.7
PDE6A-204ENST00000613228 KIAA2012Q0VF49 1180 aa10.66□□□□□ -0.7
PDE6A-204ENST00000613228 ELL2O00472 640 aaPredicted RBP10.66□□□□□ -0.7
PDE6A-204ENST00000613228 C9orf78Q9NZ63 289 aaPredicted RBP10.66□□□□□ -0.7
PDE6A-204ENST00000613228 EFCAB6Q5THR3 1501 aa10.66□□□□□ -0.7
PDE6A-204ENST00000613228 LMTK2Q8IWU2 1503 aa10.66□□□□□ -0.7
PDE6A-204ENST00000613228 ATF7IPQ6VMQ6 1270 aa10.66□□□□□ -0.7
PDE6A-204ENST00000613228 KIF1BO60333 1816 aa10.66□□□□□ -0.7
PDE6A-204ENST00000613228 APBB1O00213 710 aa10.66□□□□□ -0.7
PDE6A-204ENST00000613228 AMOTQ4VCS5 1084 aa10.66□□□□□ -0.7
PDE6A-204ENST00000613228 LRRIQ1Q96JM4 1722 aa10.65□□□□□ -0.7
PDE6A-204ENST00000613228 GORABQ5T7V8 394 aa10.65□□□□□ -0.7
PDE6A-204ENST00000613228 INTS3Q68E01 1043 aaKnown RBP10.65□□□□□ -0.7
PDE6A-204ENST00000613228 CALRP27797 417 aaKnown RBP10.65□□□□□ -0.7
PDE6A-204ENST00000613228 PANK1Q8TE04 598 aa10.65□□□□□ -0.7
PDE6A-204ENST00000613228 PDCL3Q9H2J4 239 aa10.65□□□□□ -0.7
PDE6A-204ENST00000613228 PHF8Q9UPP1 1060 aa10.65□□□□□ -0.7
PDE6A-204ENST00000613228 CDC42BPBQ9Y5S2 1711 aa10.65□□□□□ -0.7
PDE6A-204ENST00000613228 ERC2O15083 957 aa10.65□□□□□ -0.71
PDE6A-204ENST00000613228 NLRP2Q9NX02 1062 aa10.65□□□□□ -0.71
PDE6A-204ENST00000613228 NOB1Q9ULX3 412 aaKnown RBP10.65□□□□□ -0.71
PDE6A-204ENST00000613228 HSP90B1P14625 803 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms