RNA–Protein interactions for RNA: ENST00000612727.4

TBC1D3L-201, Transcript of TBC1 domain family member 3L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBC1D3L, Length 2,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3L-201ENST00000612727 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
TBC1D3L-201ENST00000612727 RRP7AQ9Y3A4 280 aaKnown RBP17.92■□□□□ 0.46
TBC1D3L-201ENST00000612727 PTPRUQ92729 1446 aa17.92■□□□□ 0.46
TBC1D3L-201ENST00000612727 U2AF1L5P0DN76 240 aaPredicted RBP17.92■□□□□ 0.46
TBC1D3L-201ENST00000612727 MS4A1P11836 297 aa17.92■□□□□ 0.46
TBC1D3L-201ENST00000612727 U2AF1Q01081 240 aaKnown RBP eCLIP17.92■□□□□ 0.46
TBC1D3L-201ENST00000612727 NEUROD2Q15784 382 aa17.92■□□□□ 0.46
TBC1D3L-201ENST00000612727 CCDC27Q2M243 656 aa17.92■□□□□ 0.46
TBC1D3L-201ENST00000612727 WDR63Q8IWG1 891 aa17.92■□□□□ 0.46
TBC1D3L-201ENST00000612727 EDC4Q6P2E9 1401 aaKnown RBP17.91■□□□□ 0.46
TBC1D3L-201ENST00000612727 COL3A1P02461 1466 aaPredicted RBP17.91■□□□□ 0.46
TBC1D3L-201ENST00000612727 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
TBC1D3L-201ENST00000612727 DIP2AQ14689 1571 aa17.91■□□□□ 0.46
TBC1D3L-201ENST00000612727 RIMS1Q86UR5 1692 aaKnown RBP17.91■□□□□ 0.46
TBC1D3L-201ENST00000612727 CEP170BQ9Y4F5 1589 aaPredicted RBP17.9■□□□□ 0.46
TBC1D3L-201ENST00000612727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.9■□□□□ 0.46
TBC1D3L-201ENST00000612727 CCDC61Q9Y6R9 512 aa17.9■□□□□ 0.46
TBC1D3L-201ENST00000612727 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.89■□□□□ 0.46
TBC1D3L-201ENST00000612727 BCAR3O75815 825 aa17.89■□□□□ 0.45
TBC1D3L-201ENST00000612727 KDM2BQ8NHM5 1336 aa17.89■□□□□ 0.45
TBC1D3L-201ENST00000612727 CENPQQ7L2Z9 268 aaPredicted RBP17.89■□□□□ 0.45
TBC1D3L-201ENST00000612727 TBX22Q9Y458 520 aa17.89■□□□□ 0.45
TBC1D3L-201ENST00000612727 PRR36Q9H6K5 1346 aa17.88■□□□□ 0.45
TBC1D3L-201ENST00000612727 PTCH1Q13635 1447 aa17.88■□□□□ 0.45
TBC1D3L-201ENST00000612727 NCKAP5LQ9HCH0 1330 aa17.88■□□□□ 0.45
TBC1D3L-201ENST00000612727 ANP32AP39687 249 aaKnown RBP17.87■□□□□ 0.45
TBC1D3L-201ENST00000612727 MON2Q7Z3U7 1717 aa17.87■□□□□ 0.45
TBC1D3L-201ENST00000612727 U2SURPO15042 1029 aaKnown RBP17.86■□□□□ 0.45
TBC1D3L-201ENST00000612727 AMOTL2Q9Y2J4 779 aa17.86■□□□□ 0.45
TBC1D3L-201ENST00000612727 ITSN1Q15811 1721 aa17.85■□□□□ 0.45
TBC1D3L-201ENST00000612727 MYH16Q9H6N6 1097 aa17.85■□□□□ 0.45
TBC1D3L-201ENST00000612727 PNPLA6Q8IY17 1366 aa17.85■□□□□ 0.45
TBC1D3L-201ENST00000612727 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
TBC1D3L-201ENST00000612727 PDE3AQ14432 1141 aa17.84■□□□□ 0.45
TBC1D3L-201ENST00000612727 TOPAZ1Q8N9V7 1692 aa17.84■□□□□ 0.45
TBC1D3L-201ENST00000612727 AKAP12Q02952 1782 aa17.84■□□□□ 0.45
TBC1D3L-201ENST00000612727 ADAMTSL3P82987 1691 aa17.83■□□□□ 0.45
TBC1D3L-201ENST00000612727 PDE4AP27815 886 aa17.83■□□□□ 0.45
TBC1D3L-201ENST00000612727 NME9Q86XW9 330 aa17.83■□□□□ 0.45
TBC1D3L-201ENST00000612727 MAPK8IP3Q9UPT6 1336 aa17.83■□□□□ 0.44
TBC1D3L-201ENST00000612727 XRN1Q8IZH2 1706 aaKnown RBP17.82■□□□□ 0.44
TBC1D3L-201ENST00000612727 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
TBC1D3L-201ENST00000612727 PLEKHF1Q96S99 279 aa17.82■□□□□ 0.44
TBC1D3L-201ENST00000612727 ZNF142P52746 1687 aaPredicted RBP17.81■□□□□ 0.44
TBC1D3L-201ENST00000612727 RARSP54136 660 aaKnown RBP17.81■□□□□ 0.44
TBC1D3L-201ENST00000612727 ZNF692Q9BU19 519 aaPredicted RBP17.81■□□□□ 0.44
TBC1D3L-201ENST00000612727 BACH2Q9BYV9 841 aa17.81■□□□□ 0.44
TBC1D3L-201ENST00000612727 DNAJC5Q9H3Z4 198 aa17.81■□□□□ 0.44
TBC1D3L-201ENST00000612727 PNNQ9H307 717 aaKnown RBP17.8■□□□□ 0.44
TBC1D3L-201ENST00000612727 POLKQ9UBT6 870 aa17.8■□□□□ 0.44
TBC1D3L-201ENST00000612727 NRKQ7Z2Y5 1582 aa17.8■□□□□ 0.44
TBC1D3L-201ENST00000612727 NOP58Q9Y2X3 529 aaKnown RBP17.79■□□□□ 0.44
TBC1D3L-201ENST00000612727 TMPOP42166 694 aaKnown RBP17.78■□□□□ 0.44
TBC1D3L-201ENST00000612727 COG3Q96JB2 828 aa17.78■□□□□ 0.44
TBC1D3L-201ENST00000612727 IPO9Q96P70 1041 aaKnown RBP17.78■□□□□ 0.44
TBC1D3L-201ENST00000612727 ZRANB1Q9UGI0 708 aa17.78■□□□□ 0.44
TBC1D3L-201ENST00000612727 AATKQ6ZMQ8 1374 aa17.78■□□□□ 0.44
TBC1D3L-201ENST00000612727 PIK3R4Q99570 1358 aa17.78■□□□□ 0.44
TBC1D3L-201ENST00000612727 PLEKHG3A1L390 1219 aa17.78■□□□□ 0.44
TBC1D3L-201ENST00000612727 NUTM2FA1L443 756 aa17.78■□□□□ 0.44
TBC1D3L-201ENST00000612727 FBLN1P23142 703 aa17.78■□□□□ 0.44
TBC1D3L-201ENST00000612727 FRAT1Q92837 279 aaPredicted RBP17.77■□□□□ 0.44
TBC1D3L-201ENST00000612727 ACEP12821 1306 aa17.77■□□□□ 0.44
TBC1D3L-201ENST00000612727 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.44
TBC1D3L-201ENST00000612727 PPM1GO15355 546 aaPredicted RBP17.77■□□□□ 0.43
TBC1D3L-201ENST00000612727 SKAP1Q86WV1 359 aa17.77■□□□□ 0.43
TBC1D3L-201ENST00000612727 CT47B1P0C2W7 299 aaPredicted RBP17.76■□□□□ 0.43
TBC1D3L-201ENST00000612727 PANK1Q8TE04 598 aa17.76■□□□□ 0.43
TBC1D3L-201ENST00000612727 USP6P35125 1406 aa17.76■□□□□ 0.43
TBC1D3L-201ENST00000612727 EMILIN1Q9Y6C2 1016 aa17.75■□□□□ 0.43
TBC1D3L-201ENST00000612727 IL16Q14005 1332 aa17.75■□□□□ 0.43
TBC1D3L-201ENST00000612727 LRRC7Q96NW7 1537 aa17.75■□□□□ 0.43
TBC1D3L-201ENST00000612727 TTC21BQ7Z4L5 1316 aa17.75■□□□□ 0.43
TBC1D3L-201ENST00000612727 CLUAP1Q96AJ1 413 aa17.75■□□□□ 0.43
TBC1D3L-201ENST00000612727 TRIM35Q9UPQ4 493 aa17.75■□□□□ 0.43
TBC1D3L-201ENST00000612727 KCNA6P17658 529 aa17.74■□□□□ 0.43
TBC1D3L-201ENST00000612727 AAMPQ13685 434 aa17.74■□□□□ 0.43
TBC1D3L-201ENST00000612727 ANKLE2Q86XL3 938 aa17.74■□□□□ 0.43
TBC1D3L-201ENST00000612727 COG6Q9Y2V7 657 aa17.74■□□□□ 0.43
TBC1D3L-201ENST00000612727 FCHSD2O94868 740 aa17.74■□□□□ 0.43
TBC1D3L-201ENST00000612727 MAP2P11137 1827 aaKnown RBP17.73■□□□□ 0.43
TBC1D3L-201ENST00000612727 OVOS2A0A0J9YW53 1432 aa17.73■□□□□ 0.43
TBC1D3L-201ENST00000612727 OVOS2Q6IE36 1432 aa17.73■□□□□ 0.43
TBC1D3L-201ENST00000612727 RIPK4P57078 832 aa17.72■□□□□ 0.43
TBC1D3L-201ENST00000612727 NPM2Q86SE8 214 aaKnown RBP17.72■□□□□ 0.43
TBC1D3L-201ENST00000612727 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
TBC1D3L-201ENST00000612727 NEFMP07197 916 aa17.71■□□□□ 0.43
TBC1D3L-201ENST00000612727 BCL2L13Q9BXK5 485 aa17.71■□□□□ 0.43
TBC1D3L-201ENST00000612727 SSH2Q76I76 1423 aa17.71■□□□□ 0.42
TBC1D3L-201ENST00000612727 ANKARQ7Z5J8 1434 aa17.71■□□□□ 0.42
TBC1D3L-201ENST00000612727 RRS1Q15050 365 aaKnown RBP17.7■□□□□ 0.42
TBC1D3L-201ENST00000612727 RSPH6AQ9H0K4 717 aa17.7■□□□□ 0.42
TBC1D3L-201ENST00000612727 ZBTB47Q9UFB7 747 aaPredicted RBP17.7■□□□□ 0.42
TBC1D3L-201ENST00000612727 PRKAR2BP31323 418 aa17.69■□□□□ 0.42
TBC1D3L-201ENST00000612727 IL13P35225 146 aa17.69■□□□□ 0.42
TBC1D3L-201ENST00000612727 EXOSC9Q06265 439 aaKnown RBP17.69■□□□□ 0.42
TBC1D3L-201ENST00000612727 PAK3O75914 559 aaPredicted RBP17.68■□□□□ 0.42
TBC1D3L-201ENST00000612727 IGHDP01880 384 aa17.68■□□□□ 0.42
TBC1D3L-201ENST00000612727 PMFBP1Q8TBY8 1022 aa17.68■□□□□ 0.42
TBC1D3L-201ENST00000612727 NALCNQ8IZF0 1738 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms