RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 GOLGA2Q08379 1002 aa13.81□□□□□ -0.2
PCDHGC3-202ENST00000611950 LMTK2Q8IWU2 1503 aa13.8□□□□□ -0.2
PCDHGC3-202ENST00000611950 PIK3C2GO75747 1445 aa13.8□□□□□ -0.2
PCDHGC3-202ENST00000611950 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
PCDHGC3-202ENST00000611950 BRPF3Q9ULD4 1205 aa13.8□□□□□ -0.2
PCDHGC3-202ENST00000611950 RRP7AQ9Y3A4 280 aaKnown RBP13.8□□□□□ -0.2
PCDHGC3-202ENST00000611950 NPC1L1Q9UHC9 1359 aa13.79□□□□□ -0.2
PCDHGC3-202ENST00000611950 NUTM2DQ5VT03 806 aaPredicted RBP13.79□□□□□ -0.2
PCDHGC3-202ENST00000611950 MED14O60244 1454 aa13.79□□□□□ -0.2
PCDHGC3-202ENST00000611950 NOS1P29475 1434 aa13.79□□□□□ -0.2
PCDHGC3-202ENST00000611950 STRCP1A6NGW2 1772 aa13.78□□□□□ -0.2
PCDHGC3-202ENST00000611950 CARD14Q9BXL6 1004 aa13.78□□□□□ -0.2
PCDHGC3-202ENST00000611950 ADGRB3O60242 1522 aa13.78□□□□□ -0.2
PCDHGC3-202ENST00000611950 ZNF521Q96K83 1311 aa13.78□□□□□ -0.2
PCDHGC3-202ENST00000611950 ALKQ9UM73 1620 aa13.77□□□□□ -0.2
PCDHGC3-202ENST00000611950 CALD1Q05682 793 aaKnown RBP13.77□□□□□ -0.21
PCDHGC3-202ENST00000611950 ABCC3O15438 1527 aa13.77□□□□□ -0.21
PCDHGC3-202ENST00000611950 TMEM132AQ24JP5 1023 aa13.76□□□□□ -0.21
PCDHGC3-202ENST00000611950 LRRC7Q96NW7 1537 aa13.75□□□□□ -0.21
PCDHGC3-202ENST00000611950 ZC3H13Q5T200 1668 aaKnown RBP13.75□□□□□ -0.21
PCDHGC3-202ENST00000611950 MS4A1P11836 297 aa13.75□□□□□ -0.21
PCDHGC3-202ENST00000611950 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
PCDHGC3-202ENST00000611950 FAM43AQ8N2R8 423 aa13.75□□□□□ -0.21
PCDHGC3-202ENST00000611950 BCL2L13Q9BXK5 485 aa13.75□□□□□ -0.21
PCDHGC3-202ENST00000611950 TRAK1Q9UPV9 953 aa13.75□□□□□ -0.21
PCDHGC3-202ENST00000611950 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-202ENST00000611950 SBNO2Q9Y2G9 1366 aa13.73□□□□□ -0.21
PCDHGC3-202ENST00000611950 SLFN5Q08AF3 891 aa13.73□□□□□ -0.21
PCDHGC3-202ENST00000611950 SAFB2Q14151 953 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCDHGC3-202ENST00000611950 TMEM132EQ6IEE7 984 aa13.73□□□□□ -0.21
PCDHGC3-202ENST00000611950 CENPJQ9HC77 1338 aaPredicted RBP13.73□□□□□ -0.21
PCDHGC3-202ENST00000611950 UBR1Q8IWV7 1749 aa13.73□□□□□ -0.21
PCDHGC3-202ENST00000611950 TXNDC2Q86VQ3 553 aa13.72□□□□□ -0.21
PCDHGC3-202ENST00000611950 PANK1Q8TE04 598 aa13.72□□□□□ -0.21
PCDHGC3-202ENST00000611950 SETBP1Q9Y6X0 1596 aa13.72□□□□□ -0.21
PCDHGC3-202ENST00000611950 CNPY4Q8N129 248 aa13.72□□□□□ -0.21
PCDHGC3-202ENST00000611950 PPLO60437 1756 aa13.72□□□□□ -0.21
PCDHGC3-202ENST00000611950 KDM2BQ8NHM5 1336 aa13.72□□□□□ -0.21
PCDHGC3-202ENST00000611950 COG6Q9Y2V7 657 aa13.72□□□□□ -0.21
PCDHGC3-202ENST00000611950 ADGRB1O14514 1584 aa13.72□□□□□ -0.21
PCDHGC3-202ENST00000611950 LTKP29376 864 aa13.71□□□□□ -0.21
PCDHGC3-202ENST00000611950 CENPQQ7L2Z9 268 aaPredicted RBP13.71□□□□□ -0.22
PCDHGC3-202ENST00000611950 C14orf93Q9H972 538 aaKnown RBP13.71□□□□□ -0.22
PCDHGC3-202ENST00000611950 TNNQ9UQP3 1299 aa13.71□□□□□ -0.22
PCDHGC3-202ENST00000611950 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.7□□□□□ -0.22
PCDHGC3-202ENST00000611950 SLC12A5Q9H2X9 1139 aa13.7□□□□□ -0.22
PCDHGC3-202ENST00000611950 CLUAP1Q96AJ1 413 aa13.7□□□□□ -0.22
PCDHGC3-202ENST00000611950 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
PCDHGC3-202ENST00000611950 IGHDP01880 384 aa13.69□□□□□ -0.22
PCDHGC3-202ENST00000611950 C8orf34Q49A92 452 aa13.69□□□□□ -0.22
PCDHGC3-202ENST00000611950 EID1Q9Y6B2 187 aa13.69□□□□□ -0.22
PCDHGC3-202ENST00000611950 TRMT2AQ8IZ69 625 aaKnown RBP13.69□□□□□ -0.22
PCDHGC3-202ENST00000611950 KCNG1Q9UIX4 513 aa13.68□□□□□ -0.22
PCDHGC3-202ENST00000611950 QRICH2Q9H0J4 1663 aa13.68□□□□□ -0.22
PCDHGC3-202ENST00000611950 NSD3Q9BZ95 1437 aa13.68□□□□□ -0.22
PCDHGC3-202ENST00000611950 NCLP19338 710 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-202ENST00000611950 FAM161AQ3B820 660 aa13.67□□□□□ -0.22
PCDHGC3-202ENST00000611950 XIRP1Q702N8 1843 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-202ENST00000611950 HSP90AA1P07900 732 aaKnown RBP13.67□□□□□ -0.22
PCDHGC3-202ENST00000611950 NFKBIBQ15653 356 aa13.66□□□□□ -0.22
PCDHGC3-202ENST00000611950 MORC1Q86VD1 984 aa13.66□□□□□ -0.22
PCDHGC3-202ENST00000611950 DDRGK1Q96HY6 314 aa13.65□□□□□ -0.22
PCDHGC3-202ENST00000611950 POLR3AO14802 1390 aaPredicted RBP13.65□□□□□ -0.22
PCDHGC3-202ENST00000611950 PIK3C2BO00750 1634 aa13.65□□□□□ -0.22
PCDHGC3-202ENST00000611950 ARHGAP23Q9P227 1491 aa13.65□□□□□ -0.22
PCDHGC3-202ENST00000611950 SLIT1O75093 1534 aa13.64□□□□□ -0.23
PCDHGC3-202ENST00000611950 RBM33Q96EV2 1170 aaKnown RBP13.64□□□□□ -0.23
PCDHGC3-202ENST00000611950 RGS17Q9UGC6 210 aaPredicted RBP13.64□□□□□ -0.23
PCDHGC3-202ENST00000611950 NKTRP30414 1462 aaKnown RBP13.64□□□□□ -0.23
PCDHGC3-202ENST00000611950 RPGRIP1LQ68CZ1 1315 aa13.64□□□□□ -0.23
PCDHGC3-202ENST00000611950 PPM1GO15355 546 aaPredicted RBP13.64□□□□□ -0.23
PCDHGC3-202ENST00000611950 SEC24BO95487 1268 aa13.64□□□□□ -0.23
PCDHGC3-202ENST00000611950 IGSF3O75054 1194 aa13.63□□□□□ -0.23
PCDHGC3-202ENST00000611950 WWC1Q8IX03 1113 aa13.63□□□□□ -0.23
PCDHGC3-202ENST00000611950 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
PCDHGC3-202ENST00000611950 E9PSI1 815 aa13.63□□□□□ -0.23
PCDHGC3-202ENST00000611950 SLC26A8Q96RN1 970 aa13.63□□□□□ -0.23
PCDHGC3-202ENST00000611950 PRDM10Q9NQV6 1147 aa13.63□□□□□ -0.23
PCDHGC3-202ENST00000611950 NEXMIFQ5QGS0 1516 aa13.63□□□□□ -0.23
PCDHGC3-202ENST00000611950 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
PCDHGC3-202ENST00000611950 ZNF830Q96NB3 372 aaPredicted RBP13.63□□□□□ -0.23
PCDHGC3-202ENST00000611950 TMEM2Q9UHN6 1383 aa13.62□□□□□ -0.23
PCDHGC3-202ENST00000611950 FRAT2O75474 233 aaPredicted RBP13.62□□□□□ -0.23
PCDHGC3-202ENST00000611950 ARHGAP31Q2M1Z3 1444 aa13.62□□□□□ -0.23
PCDHGC3-202ENST00000611950 TULP4Q9NRJ4 1543 aa13.61□□□□□ -0.23
PCDHGC3-202ENST00000611950 TMEM94Q12767 1356 aa13.61□□□□□ -0.23
PCDHGC3-202ENST00000611950 MTHFSP49914 203 aa13.61□□□□□ -0.23
PCDHGC3-202ENST00000611950 PROSER2Q86WR7 435 aaPredicted RBP13.61□□□□□ -0.23
PCDHGC3-202ENST00000611950 TCP11L2Q8N4U5 519 aa13.61□□□□□ -0.23
PCDHGC3-202ENST00000611950 SLKQ9H2G2 1235 aaPredicted RBP13.61□□□□□ -0.23
PCDHGC3-202ENST00000611950 STK26Q9P289 416 aa13.61□□□□□ -0.23
PCDHGC3-202ENST00000611950 RLBP1P12271 317 aa13.61□□□□□ -0.23
PCDHGC3-202ENST00000611950 ARHGEF28Q8N1W1 1705 aaKnown RBP13.6□□□□□ -0.23
PCDHGC3-202ENST00000611950 IDI1Q13907 227 aa13.6□□□□□ -0.23
PCDHGC3-202ENST00000611950 SPRYD3Q8NCJ5 442 aa13.6□□□□□ -0.23
PCDHGC3-202ENST00000611950 FAM135BQ49AJ0 1406 aa13.59□□□□□ -0.23
PCDHGC3-202ENST00000611950 USP32Q8NFA0 1604 aa13.59□□□□□ -0.23
PCDHGC3-202ENST00000611950 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
PCDHGC3-202ENST00000611950 CABP2Q9NPB3 220 aa13.59□□□□□ -0.23
PCDHGC3-202ENST00000611950 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms