RNA–Protein interactions for RNA: ENST00000611910.4

SYNRG-216, Transcript of synergin gamma, humanhuman

TSL 1 (best)

Gene SYNRG, Length 1,769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-216ENST00000611910 RWDD1Q9H446 243 aaPredicted RBP13.07□□□□□ -0.32
SYNRG-216ENST00000611910 KIF20BQ96Q89 1820 aa13.07□□□□□ -0.32
SYNRG-216ENST00000611910 REREQ9P2R6 1566 aa13.07□□□□□ -0.32
SYNRG-216ENST00000611910 DIAPH1O60610 1272 aaKnown RBP13.07□□□□□ -0.32
SYNRG-216ENST00000611910 TMPOP42166 694 aaKnown RBP13.07□□□□□ -0.32
SYNRG-216ENST00000611910 IL16Q14005 1332 aa13.06□□□□□ -0.32
SYNRG-216ENST00000611910 FTSJ3Q8IY81 847 aaKnown RBP13.06□□□□□ -0.32
SYNRG-216ENST00000611910 PLEKHF1Q96S99 279 aa13.06□□□□□ -0.32
SYNRG-216ENST00000611910 AGLP35573 1532 aa13.06□□□□□ -0.32
SYNRG-216ENST00000611910 BCL2L13Q9BXK5 485 aa13.05□□□□□ -0.32
SYNRG-216ENST00000611910 COL3A1P02461 1466 aaPredicted RBP13.05□□□□□ -0.32
SYNRG-216ENST00000611910 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
SYNRG-216ENST00000611910 CD163L1Q9NR16 1453 aa13.05□□□□□ -0.32
SYNRG-216ENST00000611910 MVPQ14764 893 aaKnown RBP13.04□□□□□ -0.32
SYNRG-216ENST00000611910 DZIP1LQ8IYY4 767 aaKnown RBP13.04□□□□□ -0.32
SYNRG-216ENST00000611910 CABP1Q9NZU7 370 aa13.04□□□□□ -0.32
SYNRG-216ENST00000611910 ZMYM3Q14202 1370 aa13.04□□□□□ -0.32
SYNRG-216ENST00000611910 ARHGEF40Q8TER5 1519 aa13.04□□□□□ -0.32
SYNRG-216ENST00000611910 TSPOAP1O95153 1857 aa13.04□□□□□ -0.32
SYNRG-216ENST00000611910 DIP2BQ9P265 1576 aa13.03□□□□□ -0.32
SYNRG-216ENST00000611910 RIPK4P57078 832 aa13.03□□□□□ -0.32
SYNRG-216ENST00000611910 EXOSC9Q06265 439 aaKnown RBP13.03□□□□□ -0.32
SYNRG-216ENST00000611910 SMC4Q9NTJ3 1288 aa13.03□□□□□ -0.32
SYNRG-216ENST00000611910 RLBP1P12271 317 aa13.02□□□□□ -0.32
SYNRG-216ENST00000611910 UPF2Q9HAU5 1272 aaKnown RBP13.02□□□□□ -0.32
SYNRG-216ENST00000611910 TRIM35Q9UPQ4 493 aa13.02□□□□□ -0.32
SYNRG-216ENST00000611910 PCDHB15Q9Y5E8 787 aa13.02□□□□□ -0.32
SYNRG-216ENST00000611910 ATP7BP35670 1465 aa13.02□□□□□ -0.33
SYNRG-216ENST00000611910 NLRP1Q9C000 1473 aa13.02□□□□□ -0.33
SYNRG-216ENST00000611910 FCHSD2O94868 740 aa13.02□□□□□ -0.33
SYNRG-216ENST00000611910 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.02□□□□□ -0.33
SYNRG-216ENST00000611910 TSR2Q969E8 191 aaKnown RBP13.02□□□□□ -0.33
SYNRG-216ENST00000611910 PNPLA6Q8IY17 1366 aa13.02□□□□□ -0.33
SYNRG-216ENST00000611910 RIMS2Q9UQ26 1411 aa13.01□□□□□ -0.33
SYNRG-216ENST00000611910 A2ML1A8K2U0 1454 aa13.01□□□□□ -0.33
SYNRG-216ENST00000611910 IPO8O15397 1037 aaKnown RBP13.01□□□□□ -0.33
SYNRG-216ENST00000611910 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
SYNRG-216ENST00000611910 DDX19BQ9UMR2 479 aa13.01□□□□□ -0.33
SYNRG-216ENST00000611910 SPATA31D1Q6ZQQ2 1576 aa13.01□□□□□ -0.33
SYNRG-216ENST00000611910 SLC4A3P48751 1232 aa13□□□□□ -0.33
SYNRG-216ENST00000611910 HDGFP51858 240 aaKnown RBP13□□□□□ -0.33
SYNRG-216ENST00000611910 BECN1Q14457 450 aa13□□□□□ -0.33
SYNRG-216ENST00000611910 ESF1Q9H501 851 aaKnown RBP13□□□□□ -0.33
SYNRG-216ENST00000611910 PDZRN3Q9UPQ7 1066 aa13□□□□□ -0.33
SYNRG-216ENST00000611910 TNNQ9UQP3 1299 aa13□□□□□ -0.33
SYNRG-216ENST00000611910 KIF16BQ96L93 1317 aa12.99□□□□□ -0.33
SYNRG-216ENST00000611910 CALD1Q05682 793 aaKnown RBP12.99□□□□□ -0.33
SYNRG-216ENST00000611910 ATF7IPQ6VMQ6 1270 aa12.99□□□□□ -0.33
SYNRG-216ENST00000611910 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.99□□□□□ -0.33
SYNRG-216ENST00000611910 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
SYNRG-216ENST00000611910 WAPLQ7Z5K2 1190 aa12.98□□□□□ -0.33
SYNRG-216ENST00000611910 SSH1Q8WYL5 1049 aa12.98□□□□□ -0.33
SYNRG-216ENST00000611910 RIMBP3CA6NJZ7 1639 aa12.98□□□□□ -0.33
SYNRG-216ENST00000611910 RIMBP3BA6NNM3 1639 aa12.98□□□□□ -0.33
SYNRG-216ENST00000611910 RIMBP3Q9UFD9 1639 aa12.98□□□□□ -0.33
SYNRG-216ENST00000611910 ALDH1L2Q3SY69 923 aa12.97□□□□□ -0.33
SYNRG-216ENST00000611910 ITPRIPQ8IWB1 547 aa12.97□□□□□ -0.33
SYNRG-216ENST00000611910 ZNF428Q96B54 188 aa12.97□□□□□ -0.33
SYNRG-216ENST00000611910 MAP2P11137 1827 aaKnown RBP12.97□□□□□ -0.33
SYNRG-216ENST00000611910 SETD1AO15047 1707 aaKnown RBP12.97□□□□□ -0.33
SYNRG-216ENST00000611910 TRIM27P14373 513 aa12.97□□□□□ -0.33
SYNRG-216ENST00000611910 MLECQ14165 292 aa12.97□□□□□ -0.33
SYNRG-216ENST00000611910 NFKBIBQ15653 356 aa12.97□□□□□ -0.33
SYNRG-216ENST00000611910 POLKQ9UBT6 870 aa12.97□□□□□ -0.33
SYNRG-216ENST00000611910 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
SYNRG-216ENST00000611910 WASLO00401 505 aaPredicted RBP12.96□□□□□ -0.34
SYNRG-216ENST00000611910 PRKAR2BP31323 418 aa12.96□□□□□ -0.34
SYNRG-216ENST00000611910 HDAC1Q13547 482 aaPredicted RBP12.96□□□□□ -0.34
SYNRG-216ENST00000611910 EDC4Q6P2E9 1401 aaKnown RBP12.96□□□□□ -0.34
SYNRG-216ENST00000611910 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
SYNRG-216ENST00000611910 CHMP4BQ9H444 224 aaKnown RBP12.95□□□□□ -0.34
SYNRG-216ENST00000611910 FAM135BQ49AJ0 1406 aa12.95□□□□□ -0.34
SYNRG-216ENST00000611910 LRRC7Q96NW7 1537 aa12.95□□□□□ -0.34
SYNRG-216ENST00000611910 PPIP5K1Q6PFW1 1433 aa12.94□□□□□ -0.34
SYNRG-216ENST00000611910 SIRT1Q96EB6 747 aa12.94□□□□□ -0.34
SYNRG-216ENST00000611910 USP19O94966 1318 aa12.94□□□□□ -0.34
SYNRG-216ENST00000611910 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
SYNRG-216ENST00000611910 CPSF1Q10570 1443 aaKnown RBP12.93□□□□□ -0.34
SYNRG-216ENST00000611910 SEC24BO95487 1268 aa12.93□□□□□ -0.34
SYNRG-216ENST00000611910 LMOD3Q0VAK6 560 aa12.93□□□□□ -0.34
SYNRG-216ENST00000611910 COG3Q96JB2 828 aa12.93□□□□□ -0.34
SYNRG-216ENST00000611910 KNDC1Q76NI1 1749 aa12.92□□□□□ -0.34
SYNRG-216ENST00000611910 GNAI1P63096 354 aa12.92□□□□□ -0.34
SYNRG-216ENST00000611910 TMEM57Q8N5G2 664 aa12.92□□□□□ -0.34
SYNRG-216ENST00000611910 NUDT16Q96DE0 195 aaKnown RBP12.92□□□□□ -0.34
SYNRG-216ENST00000611910 ZNF692Q9BU19 519 aaPredicted RBP12.92□□□□□ -0.34
SYNRG-216ENST00000611910 CCDC61Q9Y6R9 512 aa12.92□□□□□ -0.34
SYNRG-216ENST00000611910 AATKQ6ZMQ8 1374 aa12.92□□□□□ -0.34
SYNRG-216ENST00000611910 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
SYNRG-216ENST00000611910 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
SYNRG-216ENST00000611910 HMOX1P09601 288 aa12.91□□□□□ -0.34
SYNRG-216ENST00000611910 BRPF1P55201 1214 aaPredicted RBP12.91□□□□□ -0.34
SYNRG-216ENST00000611910 GSE1Q14687 1217 aa12.91□□□□□ -0.34
SYNRG-216ENST00000611910 ITSN1Q15811 1721 aa12.9□□□□□ -0.34
SYNRG-216ENST00000611910 TXNDC2Q86VQ3 553 aa12.9□□□□□ -0.34
SYNRG-216ENST00000611910 TBC1D32Q96NH3 1257 aa12.9□□□□□ -0.34
SYNRG-216ENST00000611910 ZBTB40Q9NUA8 1239 aa12.9□□□□□ -0.34
SYNRG-216ENST00000611910 IFT57Q9NWB7 429 aa12.9□□□□□ -0.34
SYNRG-216ENST00000611910 MON2Q7Z3U7 1717 aa12.9□□□□□ -0.34
SYNRG-216ENST00000611910 METP08581 1390 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms