RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 GGNBP2Q9H3C7 697 aa18.2■□□□□ 0.5
COPS7B-223ENST00000611614 FYB1O15117 783 aa18.2■□□□□ 0.5
COPS7B-223ENST00000611614 CPSF1Q10570 1443 aaKnown RBP18.19■□□□□ 0.5
COPS7B-223ENST00000611614 PLEKHG3A1L390 1219 aa18.18■□□□□ 0.5
COPS7B-223ENST00000611614 EDC4Q6P2E9 1401 aaKnown RBP18.18■□□□□ 0.5
COPS7B-223ENST00000611614 PROSER2Q86WR7 435 aaPredicted RBP18.17■□□□□ 0.5
COPS7B-223ENST00000611614 CFAP53Q96M91 514 aa18.17■□□□□ 0.5
COPS7B-223ENST00000611614 ZNF521Q96K83 1311 aa18.17■□□□□ 0.5
COPS7B-223ENST00000611614 CDC42BPGQ6DT37 1551 aa18.17■□□□□ 0.5
COPS7B-223ENST00000611614 ACEP12821 1306 aa18.16■□□□□ 0.5
COPS7B-223ENST00000611614 ANP32AP39687 249 aaKnown RBP18.16■□□□□ 0.5
COPS7B-223ENST00000611614 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
COPS7B-223ENST00000611614 RBM33Q96EV2 1170 aaKnown RBP18.15■□□□□ 0.5
COPS7B-223ENST00000611614 ANKARQ7Z5J8 1434 aa18.15■□□□□ 0.5
COPS7B-223ENST00000611614 MTHFSP49914 203 aa18.14■□□□□ 0.49
COPS7B-223ENST00000611614 GOLGA2Q08379 1002 aa18.14■□□□□ 0.49
COPS7B-223ENST00000611614 PMFBP1Q8TBY8 1022 aa18.14■□□□□ 0.49
COPS7B-223ENST00000611614 DUSP27Q5VZP5 1158 aa18.13■□□□□ 0.49
COPS7B-223ENST00000611614 ADGRL3Q9HAR2 1447 aa18.13■□□□□ 0.49
COPS7B-223ENST00000611614 LMTK3Q96Q04 1460 aa18.13■□□□□ 0.49
COPS7B-223ENST00000611614 POLR3AO14802 1390 aaPredicted RBP18.13■□□□□ 0.49
COPS7B-223ENST00000611614 COG3Q96JB2 828 aa18.12■□□□□ 0.49
COPS7B-223ENST00000611614 IPO9Q96P70 1041 aaKnown RBP18.12■□□□□ 0.49
COPS7B-223ENST00000611614 PLIN1O60240 522 aa18.11■□□□□ 0.49
COPS7B-223ENST00000611614 DEKP35659 375 aaKnown RBP18.11■□□□□ 0.49
COPS7B-223ENST00000611614 NWD1Q149M9 1564 aa18.11■□□□□ 0.49
COPS7B-223ENST00000611614 NKTRP30414 1462 aaKnown RBP18.11■□□□□ 0.49
COPS7B-223ENST00000611614 ITSN1Q15811 1721 aa18.11■□□□□ 0.49
COPS7B-223ENST00000611614 NME9Q86XW9 330 aa18.1■□□□□ 0.49
COPS7B-223ENST00000611614 CCDC146Q8IYE0 955 aa18.1■□□□□ 0.49
COPS7B-223ENST00000611614 TOPAZ1Q8N9V7 1692 aa18.09■□□□□ 0.49
COPS7B-223ENST00000611614 SLFN5Q08AF3 891 aa18.09■□□□□ 0.49
COPS7B-223ENST00000611614 TTC21BQ7Z4L5 1316 aa18.09■□□□□ 0.49
COPS7B-223ENST00000611614 NGEFQ8N5V2 710 aa18.09■□□□□ 0.49
COPS7B-223ENST00000611614 USP6P35125 1406 aa18.09■□□□□ 0.49
COPS7B-223ENST00000611614 CRBNQ96SW2 442 aa18.08■□□□□ 0.49
COPS7B-223ENST00000611614 KIF20BQ96Q89 1820 aa18.08■□□□□ 0.48
COPS7B-223ENST00000611614 APAF1O14727 1248 aa18.08■□□□□ 0.48
COPS7B-223ENST00000611614 TRMT2AQ8IZ69 625 aaKnown RBP18.08■□□□□ 0.48
COPS7B-223ENST00000611614 C19orf44Q9H6X5 657 aa18.08■□□□□ 0.48
COPS7B-223ENST00000611614 MON2Q7Z3U7 1717 aa18.07■□□□□ 0.48
COPS7B-223ENST00000611614 NALCNQ8IZF0 1738 aa18.07■□□□□ 0.48
COPS7B-223ENST00000611614 AKAP12Q02952 1782 aa18.07■□□□□ 0.48
COPS7B-223ENST00000611614 TTC21AQ8NDW8 1320 aa18.07■□□□□ 0.48
COPS7B-223ENST00000611614 FMN2Q9NZ56 1722 aa18.07■□□□□ 0.48
COPS7B-223ENST00000611614 PHF8Q9UPP1 1060 aa18.07■□□□□ 0.48
COPS7B-223ENST00000611614 ANKRD26Q9UPS8 1709 aa18.06■□□□□ 0.48
COPS7B-223ENST00000611614 ESCO1Q5FWF5 840 aa18.06■□□□□ 0.48
COPS7B-223ENST00000611614 PAK3O75914 559 aaPredicted RBP18.05■□□□□ 0.48
COPS7B-223ENST00000611614 TCERG1O14776 1098 aaKnown RBP18.05■□□□□ 0.48
COPS7B-223ENST00000611614 ATF3P18847 181 aa18.05■□□□□ 0.48
COPS7B-223ENST00000611614 ZBTB47Q9UFB7 747 aaPredicted RBP18.05■□□□□ 0.48
COPS7B-223ENST00000611614 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
COPS7B-223ENST00000611614 TMEM94Q12767 1356 aa18.04■□□□□ 0.48
COPS7B-223ENST00000611614 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.03■□□□□ 0.48
COPS7B-223ENST00000611614 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
COPS7B-223ENST00000611614 NCOA3Q9Y6Q9 1424 aa18.03■□□□□ 0.48
COPS7B-223ENST00000611614 ZRANB1Q9UGI0 708 aa18.03■□□□□ 0.48
COPS7B-223ENST00000611614 E9PSI1 815 aa18.02■□□□□ 0.48
COPS7B-223ENST00000611614 C20orf194Q5TEA3 1177 aa18.02■□□□□ 0.48
COPS7B-223ENST00000611614 RGPD8O14715 1765 aaPredicted RBP18.02■□□□□ 0.47
COPS7B-223ENST00000611614 PSME1Q06323 249 aa18.01■□□□□ 0.47
COPS7B-223ENST00000611614 SHPRHQ149N8 1683 aa18.01■□□□□ 0.47
COPS7B-223ENST00000611614 MS4A1P11836 297 aa18■□□□□ 0.47
COPS7B-223ENST00000611614 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
COPS7B-223ENST00000611614 POLKQ9UBT6 870 aa18■□□□□ 0.47
COPS7B-223ENST00000611614 AATKQ6ZMQ8 1374 aa18■□□□□ 0.47
COPS7B-223ENST00000611614 DIAPH1O60610 1272 aaKnown RBP18■□□□□ 0.47
COPS7B-223ENST00000611614 U2AF1L5P0DN76 240 aaPredicted RBP18■□□□□ 0.47
COPS7B-223ENST00000611614 U2AF1Q01081 240 aaKnown RBP eCLIP18■□□□□ 0.47
COPS7B-223ENST00000611614 SSH2Q76I76 1423 aa17.99■□□□□ 0.47
COPS7B-223ENST00000611614 RTL5Q5HYW3 569 aaPredicted RBP17.99■□□□□ 0.47
COPS7B-223ENST00000611614 U2SURPO15042 1029 aaKnown RBP17.99■□□□□ 0.47
COPS7B-223ENST00000611614 CADPS2Q86UW7 1296 aa17.99■□□□□ 0.47
COPS7B-223ENST00000611614 STRCQ7RTU9 1775 aa17.98■□□□□ 0.47
COPS7B-223ENST00000611614 MSH6P52701 1360 aa17.98■□□□□ 0.47
COPS7B-223ENST00000611614 FBLN1P23142 703 aa17.98■□□□□ 0.47
COPS7B-223ENST00000611614 NLRP6P59044 892 aa17.98■□□□□ 0.47
COPS7B-223ENST00000611614 ABTB2Q8N961 1025 aa17.98■□□□□ 0.47
COPS7B-223ENST00000611614 NRKQ7Z2Y5 1582 aa17.98■□□□□ 0.47
COPS7B-223ENST00000611614 NBR1Q14596 966 aa17.97■□□□□ 0.47
COPS7B-223ENST00000611614 RUNDC1Q96C34 613 aa17.97■□□□□ 0.47
COPS7B-223ENST00000611614 ORAI2Q96SN7 254 aa17.97■□□□□ 0.47
COPS7B-223ENST00000611614 DCCP43146 1447 aa17.97■□□□□ 0.47
COPS7B-223ENST00000611614 EMILIN1Q9Y6C2 1016 aa17.96■□□□□ 0.47
COPS7B-223ENST00000611614 PNPLA6Q8IY17 1366 aa17.96■□□□□ 0.47
COPS7B-223ENST00000611614 RRS1Q15050 365 aaKnown RBP17.96■□□□□ 0.47
COPS7B-223ENST00000611614 WWC1Q8IX03 1113 aa17.96■□□□□ 0.47
COPS7B-223ENST00000611614 OVOS2A0A0J9YW53 1432 aa17.96■□□□□ 0.47
COPS7B-223ENST00000611614 OVOS2Q6IE36 1432 aa17.96■□□□□ 0.47
COPS7B-223ENST00000611614 FOXO3O43524 673 aa17.95■□□□□ 0.46
COPS7B-223ENST00000611614 PNNQ9H307 717 aaKnown RBP17.95■□□□□ 0.46
COPS7B-223ENST00000611614 SOX12O15370 315 aa17.95■□□□□ 0.46
COPS7B-223ENST00000611614 ZNF335Q9H4Z2 1342 aaPredicted RBP17.94■□□□□ 0.46
COPS7B-223ENST00000611614 USP31Q70CQ4 1352 aa17.94■□□□□ 0.46
COPS7B-223ENST00000611614 C1orf167Q5SNV9 1468 aa17.94■□□□□ 0.46
COPS7B-223ENST00000611614 IQSEC2Q5JU85 1478 aa17.93■□□□□ 0.46
COPS7B-223ENST00000611614 STRCP1A6NGW2 1772 aa17.93■□□□□ 0.46
COPS7B-223ENST00000611614 KDM2BQ8NHM5 1336 aa17.93■□□□□ 0.46
COPS7B-223ENST00000611614 PDE4AP27815 886 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms