RNA–Protein interactions for RNA: ENST00000610705.1

AP004609.3-201, humanhuman

BASIC

Gene AP004609.3, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.3-201ENST00000610705 GTF3C3Q9Y5Q9 886 aa32.89■■■□□ 2.86
AP004609.3-201ENST00000610705 NRKQ7Z2Y5 1582 aa32.89■■■□□ 2.86
AP004609.3-201ENST00000610705 COG3Q96JB2 828 aa32.87■■■□□ 2.85
AP004609.3-201ENST00000610705 ZRANB1Q9UGI0 708 aa32.86■■■□□ 2.85
AP004609.3-201ENST00000610705 STRCQ7RTU9 1775 aa32.85■■■□□ 2.85
AP004609.3-201ENST00000610705 SCAF1Q9H7N4 1312 aaKnown RBP32.85■■■□□ 2.85
AP004609.3-201ENST00000610705 SHPRHQ149N8 1683 aa32.82■■■□□ 2.84
AP004609.3-201ENST00000610705 STRCP1A6NGW2 1772 aa32.81■■■□□ 2.84
AP004609.3-201ENST00000610705 SALL2Q9Y467 1007 aaPredicted RBP32.81■■■□□ 2.84
AP004609.3-201ENST00000610705 SSH2Q76I76 1423 aa32.81■■■□□ 2.84
AP004609.3-201ENST00000610705 PHF8Q9UPP1 1060 aa32.8■■■□□ 2.84
AP004609.3-201ENST00000610705 TTC21AQ8NDW8 1320 aa32.8■■■□□ 2.84
AP004609.3-201ENST00000610705 TMEM94Q12767 1356 aa32.78■■■□□ 2.84
AP004609.3-201ENST00000610705 C19orf44Q9H6X5 657 aa32.78■■■□□ 2.84
AP004609.3-201ENST00000610705 ESCO1Q5FWF5 840 aa32.77■■■□□ 2.84
AP004609.3-201ENST00000610705 FBLN1P23142 703 aa32.76■■■□□ 2.84
AP004609.3-201ENST00000610705 CCDC146Q8IYE0 955 aa32.76■■■□□ 2.83
AP004609.3-201ENST00000610705 POLKQ9UBT6 870 aa32.75■■■□□ 2.83
AP004609.3-201ENST00000610705 AATKQ6ZMQ8 1374 aa32.74■■■□□ 2.83
AP004609.3-201ENST00000610705 PPM1GO15355 546 aaPredicted RBP32.74■■■□□ 2.83
AP004609.3-201ENST00000610705 OVOS2A0A0J9YW53 1432 aa32.73■■■□□ 2.83
AP004609.3-201ENST00000610705 OVOS2Q6IE36 1432 aa32.73■■■□□ 2.83
AP004609.3-201ENST00000610705 NCOA3Q9Y6Q9 1424 aa32.72■■■□□ 2.83
AP004609.3-201ENST00000610705 COL3A1P02461 1466 aaPredicted RBP32.72■■■□□ 2.83
AP004609.3-201ENST00000610705 NUDCQ9Y266 331 aa32.71■■■□□ 2.83
AP004609.3-201ENST00000610705 MAP2P11137 1827 aaKnown RBP32.7■■■□□ 2.83
AP004609.3-201ENST00000610705 PNPLA6Q8IY17 1366 aa32.69■■■□□ 2.82
AP004609.3-201ENST00000610705 ATF3P18847 181 aa32.69■■■□□ 2.82
AP004609.3-201ENST00000610705 EMILIN1Q9Y6C2 1016 aa32.69■■■□□ 2.82
AP004609.3-201ENST00000610705 DIAPH1O60610 1272 aaKnown RBP32.67■■■□□ 2.82
AP004609.3-201ENST00000610705 U2AF1L5P0DN76 240 aaPredicted RBP32.67■■■□□ 2.82
AP004609.3-201ENST00000610705 U2AF1Q01081 240 aaKnown RBP eCLIP32.67■■■□□ 2.82
AP004609.3-201ENST00000610705 ORAI2Q96SN7 254 aa32.67■■■□□ 2.82
AP004609.3-201ENST00000610705 PAK3O75914 559 aaPredicted RBP32.67■■■□□ 2.82
AP004609.3-201ENST00000610705 SMG6Q86US8 1419 aaKnown RBP32.67■■■□□ 2.82
AP004609.3-201ENST00000610705 U2SURPO15042 1029 aaKnown RBP32.66■■■□□ 2.82
AP004609.3-201ENST00000610705 RRS1Q15050 365 aaKnown RBP32.66■■■□□ 2.82
AP004609.3-201ENST00000610705 PSME1Q06323 249 aa32.65■■■□□ 2.82
AP004609.3-201ENST00000610705 PIK3C2AO00443 1686 aa32.65■■■□□ 2.82
AP004609.3-201ENST00000610705 DCCP43146 1447 aa32.65■■■□□ 2.82
AP004609.3-201ENST00000610705 USP31Q70CQ4 1352 aa32.64■■■□□ 2.82
AP004609.3-201ENST00000610705 C1orf167Q5SNV9 1468 aa32.64■■■□□ 2.82
AP004609.3-201ENST00000610705 APAF1O14727 1248 aa32.64■■■□□ 2.82
AP004609.3-201ENST00000610705 PDE3BQ13370 1112 aa32.63■■■□□ 2.81
AP004609.3-201ENST00000610705 ZNF335Q9H4Z2 1342 aaPredicted RBP32.63■■■□□ 2.81
AP004609.3-201ENST00000610705 CDK12Q9NYV4 1490 aaPredicted RBP32.63■■■□□ 2.81
AP004609.3-201ENST00000610705 RUNDC1Q96C34 613 aa32.63■■■□□ 2.81
AP004609.3-201ENST00000610705 NLRP6P59044 892 aa32.61■■■□□ 2.81
AP004609.3-201ENST00000610705 ABTB2Q8N961 1025 aa32.61■■■□□ 2.81
AP004609.3-201ENST00000610705 MSH6P52701 1360 aa32.61■■■□□ 2.81
AP004609.3-201ENST00000610705 SOX12O15370 315 aa32.6■■■□□ 2.81
AP004609.3-201ENST00000610705 CADPS2Q86UW7 1296 aa32.59■■■□□ 2.81
AP004609.3-201ENST00000610705 MST1RQ04912 1400 aa32.59■■■□□ 2.81
AP004609.3-201ENST00000610705 FOXO3O43524 673 aa32.59■■■□□ 2.81
AP004609.3-201ENST00000610705 NUTM2GQ5VZR2 741 aa32.59■■■□□ 2.81
AP004609.3-201ENST00000610705 DMRT2Q9Y5R5 561 aa32.59■■■□□ 2.81
AP004609.3-201ENST00000610705 KIF1AQ12756 1690 aa32.57■■■□□ 2.8
AP004609.3-201ENST00000610705 LRRC7Q96NW7 1537 aa32.57■■■□□ 2.8
AP004609.3-201ENST00000610705 SUPT16HQ9Y5B9 1047 aaKnown RBP32.56■■■□□ 2.8
AP004609.3-201ENST00000610705 NGEFQ8N5V2 710 aa32.54■■■□□ 2.8
AP004609.3-201ENST00000610705 XIRP1Q702N8 1843 aaKnown RBP32.54■■■□□ 2.8
AP004609.3-201ENST00000610705 CDCA7LQ96GN5 454 aa32.52■■■□□ 2.8
AP004609.3-201ENST00000610705 USP54Q70EL1 1684 aa32.52■■■□□ 2.8
AP004609.3-201ENST00000610705 XPCQ01831 940 aaPredicted RBP32.52■■■□□ 2.8
AP004609.3-201ENST00000610705 NEFLP07196 543 aa32.51■■■□□ 2.79
AP004609.3-201ENST00000610705 TCP11L2Q8N4U5 519 aa32.51■■■□□ 2.79
AP004609.3-201ENST00000610705 IQSEC2Q5JU85 1478 aa32.51■■■□□ 2.79
AP004609.3-201ENST00000610705 IL13P35225 146 aa32.5■■■□□ 2.79
AP004609.3-201ENST00000610705 ZNF521Q96K83 1311 aa32.5■■■□□ 2.79
AP004609.3-201ENST00000610705 PNNQ9H307 717 aaKnown RBP32.49■■■□□ 2.79
AP004609.3-201ENST00000610705 MARF1Q9Y4F3 1742 aaKnown RBP32.49■■■□□ 2.79
AP004609.3-201ENST00000610705 KRT28Q7Z3Y7 464 aa32.48■■■□□ 2.79
AP004609.3-201ENST00000610705 MAP3K19Q56UN5 1328 aa32.48■■■□□ 2.79
AP004609.3-201ENST00000610705 NEUROD2Q15784 382 aa32.47■■■□□ 2.79
AP004609.3-201ENST00000610705 RRP7AQ9Y3A4 280 aaKnown RBP32.47■■■□□ 2.79
AP004609.3-201ENST00000610705 PEAK1Q9H792 1746 aa32.46■■■□□ 2.79
AP004609.3-201ENST00000610705 GOLGA2Q08379 1002 aa32.46■■■□□ 2.79
AP004609.3-201ENST00000610705 MAPK8IP3Q9UPT6 1336 aa32.46■■■□□ 2.79
AP004609.3-201ENST00000610705 PLEKHF1Q96S99 279 aa32.46■■■□□ 2.79
AP004609.3-201ENST00000610705 FCHSD2O94868 740 aa32.45■■■□□ 2.79
AP004609.3-201ENST00000610705 SBNO1A3KN83 1393 aa32.44■■■□□ 2.78
AP004609.3-201ENST00000610705 AMPHP49418 695 aa32.44■■■□□ 2.78
AP004609.3-201ENST00000610705 FLT4P35916 1363 aa32.42■■■□□ 2.78
AP004609.3-201ENST00000610705 FKBP8Q14318 412 aa32.42■■■□□ 2.78
AP004609.3-201ENST00000610705 HSP90AB2PQ58FF8 381 aa32.42■■■□□ 2.78
AP004609.3-201ENST00000610705 LMOD2Q6P5Q4 547 aa32.42■■■□□ 2.78
AP004609.3-201ENST00000610705 HMOX1P09601 288 aa32.42■■■□□ 2.78
AP004609.3-201ENST00000610705 EIF4A2Q14240 407 aaKnown RBP32.42■■■□□ 2.78
AP004609.3-201ENST00000610705 TRPM3Q9HCF6 1732 aaPredicted RBP32.41■■■□□ 2.78
AP004609.3-201ENST00000610705 RSPH6AQ9H0K4 717 aa32.41■■■□□ 2.78
AP004609.3-201ENST00000610705 WWC1Q8IX03 1113 aa32.4■■■□□ 2.78
AP004609.3-201ENST00000610705 NEFMP07197 916 aa32.4■■■□□ 2.78
AP004609.3-201ENST00000610705 PRKAR2BP31323 418 aa32.4■■■□□ 2.78
AP004609.3-201ENST00000610705 NPHP3Q7Z494 1330 aa32.37■■■□□ 2.77
AP004609.3-201ENST00000610705 DDX17Q92841 729 aaKnown RBP32.37■■■□□ 2.77
AP004609.3-201ENST00000610705 NCBP3Q53F19 620 aaKnown RBP32.36■■■□□ 2.77
AP004609.3-201ENST00000610705 KCNH5Q8NCM2 988 aa32.36■■■□□ 2.77
AP004609.3-201ENST00000610705 SLFN5Q08AF3 891 aa32.35■■■□□ 2.77
AP004609.3-201ENST00000610705 CCDC27Q2M243 656 aa32.35■■■□□ 2.77
AP004609.3-201ENST00000610705 KIF24Q5T7B8 1368 aa32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms