RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 ZNF142P52746 1687 aaPredicted RBP16.35■□□□□ 0.21
TP53-219ENST00000610538 POLR3AO14802 1390 aaPredicted RBP16.35■□□□□ 0.21
TP53-219ENST00000610538 U2SURPO15042 1029 aaKnown RBP16.34■□□□□ 0.21
TP53-219ENST00000610538 U2AF1L5P0DN76 240 aaPredicted RBP16.34■□□□□ 0.21
TP53-219ENST00000610538 U2AF1Q01081 240 aaKnown RBP eCLIP16.34■□□□□ 0.215e-7■■■■□ 23
TP53-219ENST00000610538 NUDCQ9Y266 331 aa16.33■□□□□ 0.21
TP53-219ENST00000610538 PIK3R4Q99570 1358 aa16.33■□□□□ 0.2
TP53-219ENST00000610538 BLMP54132 1417 aaPredicted RBP16.33■□□□□ 0.2
TP53-219ENST00000610538 RRS1Q15050 365 aaKnown RBP16.33■□□□□ 0.2
TP53-219ENST00000610538 DIP2AQ14689 1571 aa16.33■□□□□ 0.2
TP53-219ENST00000610538 PLEKHG3A1L390 1219 aa16.33■□□□□ 0.2
TP53-219ENST00000610538 COG3Q96JB2 828 aa16.33■□□□□ 0.2
TP53-219ENST00000610538 RRP7AQ9Y3A4 280 aaKnown RBP16.33■□□□□ 0.2
TP53-219ENST00000610538 EMILIN1Q9Y6C2 1016 aa16.33■□□□□ 0.2
TP53-219ENST00000610538 POLKQ9UBT6 870 aa16.32■□□□□ 0.2
TP53-219ENST00000610538 USP32Q8NFA0 1604 aa16.32■□□□□ 0.2
TP53-219ENST00000610538 EDC4Q6P2E9 1401 aaKnown RBP16.32■□□□□ 0.2
TP53-219ENST00000610538 NUTM2GQ5VZR2 741 aa16.31■□□□□ 0.2
TP53-219ENST00000610538 PROSER2Q86WR7 435 aaPredicted RBP16.31■□□□□ 0.2
TP53-219ENST00000610538 TTC21BQ7Z4L5 1316 aa16.31■□□□□ 0.2
TP53-219ENST00000610538 NKTRP30414 1462 aaKnown RBP16.3■□□□□ 0.2
TP53-219ENST00000610538 PAK3O75914 559 aaPredicted RBP16.3■□□□□ 0.2
TP53-219ENST00000610538 XRN1Q8IZH2 1706 aaKnown RBP16.29■□□□□ 0.2
TP53-219ENST00000610538 PLEKHG5O94827 1062 aa16.29■□□□□ 0.2
TP53-219ENST00000610538 ESCO1Q5FWF5 840 aa16.29■□□□□ 0.2
TP53-219ENST00000610538 RGPD8O14715 1765 aaPredicted RBP16.28■□□□□ 0.2
TP53-219ENST00000610538 CDC42BPGQ6DT37 1551 aa16.28■□□□□ 0.2
TP53-219ENST00000610538 SMG6Q86US8 1419 aaKnown RBP16.28■□□□□ 0.2
TP53-219ENST00000610538 CHD2O14647 1828 aaKnown RBP16.27■□□□□ 0.2
TP53-219ENST00000610538 ADGRB2O60241 1585 aa16.27■□□□□ 0.2
TP53-219ENST00000610538 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.19
TP53-219ENST00000610538 TCP11L2Q8N4U5 519 aa16.27■□□□□ 0.19
TP53-219ENST00000610538 USP6P35125 1406 aa16.26■□□□□ 0.19
TP53-219ENST00000610538 XPCQ01831 940 aaPredicted RBP16.26■□□□□ 0.19
TP53-219ENST00000610538 ORAI2Q96SN7 254 aa16.26■□□□□ 0.19
TP53-219ENST00000610538 DMRT2Q9Y5R5 561 aa16.26■□□□□ 0.19
TP53-219ENST00000610538 SPINK5Q9NQ38 1064 aaPredicted RBP16.25■□□□□ 0.19
TP53-219ENST00000610538 RUNDC1Q96C34 613 aa16.25■□□□□ 0.19
TP53-219ENST00000610538 PHF8Q9UPP1 1060 aa16.24■□□□□ 0.19
TP53-219ENST00000610538 INSRP06213 1382 aa16.24■□□□□ 0.19
TP53-219ENST00000610538 HMOX1P09601 288 aa16.24■□□□□ 0.19
TP53-219ENST00000610538 PDE3BQ13370 1112 aa16.24■□□□□ 0.19
TP53-219ENST00000610538 FOXO3O43524 673 aa16.23■□□□□ 0.19
TP53-219ENST00000610538 NLRP6P59044 892 aa16.23■□□□□ 0.19
TP53-219ENST00000610538 GOLGA2Q08379 1002 aa16.23■□□□□ 0.19
TP53-219ENST00000610538 KIF20BQ96Q89 1820 aa16.23■□□□□ 0.19
TP53-219ENST00000610538 ABTB2Q8N961 1025 aa16.22■□□□□ 0.19
TP53-219ENST00000610538 PSME1Q06323 249 aa16.22■□□□□ 0.19
TP53-219ENST00000610538 SHPRHQ149N8 1683 aa16.21■□□□□ 0.19
TP53-219ENST00000610538 ITSN1Q15811 1721 aa16.21■□□□□ 0.19
TP53-219ENST00000610538 TPRNQ4KMQ1 711 aa16.21■□□□□ 0.19
TP53-219ENST00000610538 MAP2P11137 1827 aaKnown RBP16.21■□□□□ 0.19
TP53-219ENST00000610538 WWC1Q8IX03 1113 aa16.21■□□□□ 0.18
TP53-219ENST00000610538 RCAN3Q9UKA8 241 aa16.21■□□□□ 0.18
TP53-219ENST00000610538 ZNF521Q96K83 1311 aa16.2■□□□□ 0.18
TP53-219ENST00000610538 MON2Q7Z3U7 1717 aa16.2■□□□□ 0.18
TP53-219ENST00000610538 NALCNQ8IZF0 1738 aa16.2■□□□□ 0.18
TP53-219ENST00000610538 AKAP12Q02952 1782 aa16.2■□□□□ 0.18
TP53-219ENST00000610538 LMOD2Q6P5Q4 547 aa16.2■□□□□ 0.18
TP53-219ENST00000610538 PNPLA6Q8IY17 1366 aa16.19■□□□□ 0.18
TP53-219ENST00000610538 ADGRL3Q9HAR2 1447 aa16.19■□□□□ 0.18
TP53-219ENST00000610538 HSP90AB2PQ58FF8 381 aa16.19■□□□□ 0.18
TP53-219ENST00000610538 TOPAZ1Q8N9V7 1692 aa16.19■□□□□ 0.18
TP53-219ENST00000610538 ANKRD26Q9UPS8 1709 aa16.19■□□□□ 0.18
TP53-219ENST00000610538 DUSP27Q5VZP5 1158 aa16.19■□□□□ 0.18
TP53-219ENST00000610538 C19orf44Q9H6X5 657 aa16.19■□□□□ 0.18
TP53-219ENST00000610538 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
TP53-219ENST00000610538 SSH2Q76I76 1423 aa16.18■□□□□ 0.18
TP53-219ENST00000610538 PLEKHF1Q96S99 279 aa16.18■□□□□ 0.18
TP53-219ENST00000610538 TMEM94Q12767 1356 aa16.18■□□□□ 0.18
TP53-219ENST00000610538 PLIN1O60240 522 aa16.17■□□□□ 0.18
TP53-219ENST00000610538 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
TP53-219ENST00000610538 SLFN5Q08AF3 891 aa16.17■□□□□ 0.18
TP53-219ENST00000610538 DDX17Q92841 729 aaKnown RBP16.17■□□□□ 0.18
TP53-219ENST00000610538 ANKARQ7Z5J8 1434 aa16.17■□□□□ 0.18
TP53-219ENST00000610538 COL3A1P02461 1466 aaPredicted RBP16.17■□□□□ 0.18
TP53-219ENST00000610538 PRKAR2BP31323 418 aa16.17■□□□□ 0.18
TP53-219ENST00000610538 IL13P35225 146 aa16.17■□□□□ 0.18
TP53-219ENST00000610538 TTC21AQ8NDW8 1320 aa16.16■□□□□ 0.18
TP53-219ENST00000610538 MAPK8IP3Q9UPT6 1336 aa16.16■□□□□ 0.18
TP53-219ENST00000610538 LMTK3Q96Q04 1460 aa16.16■□□□□ 0.18
TP53-219ENST00000610538 ATF3P18847 181 aa16.16■□□□□ 0.18
TP53-219ENST00000610538 PHACTR3Q96KR7 559 aa16.16■□□□□ 0.18
TP53-219ENST00000610538 AATKQ6ZMQ8 1374 aa16.15■□□□□ 0.18
TP53-219ENST00000610538 OVOS2A0A0J9YW53 1432 aa16.15■□□□□ 0.18
TP53-219ENST00000610538 OVOS2Q6IE36 1432 aa16.15■□□□□ 0.18
TP53-219ENST00000610538 MAP3K19Q56UN5 1328 aa16.15■□□□□ 0.18
TP53-219ENST00000610538 FMN2Q9NZ56 1722 aa16.15■□□□□ 0.18
TP53-219ENST00000610538 ZBTB7CA1YPR0 619 aa16.15■□□□□ 0.18
TP53-219ENST00000610538 TMPOP42166 694 aaKnown RBP16.14■□□□□ 0.17
TP53-219ENST00000610538 ZNF335Q9H4Z2 1342 aaPredicted RBP16.14■□□□□ 0.17
TP53-219ENST00000610538 AMPHP49418 695 aa16.14■□□□□ 0.17
TP53-219ENST00000610538 EIF4A2Q14240 407 aaKnown RBP16.14■□□□□ 0.17
TP53-219ENST00000610538 RIPK4P57078 832 aa16.13■□□□□ 0.17
TP53-219ENST00000610538 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
TP53-219ENST00000610538 FCHSD2O94868 740 aa16.13■□□□□ 0.17
TP53-219ENST00000610538 AEBP1Q8IUX7 1158 aa16.13■□□□□ 0.17
TP53-219ENST00000610538 NRKQ7Z2Y5 1582 aa16.12■□□□□ 0.17
TP53-219ENST00000610538 E9PSI1 815 aa16.12■□□□□ 0.17
TP53-219ENST00000610538 SULT6B1Q6IMI4 303 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms