RNA–Protein interactions for RNA: ENST00000610160.1

COMMD7-204, Transcript of COMM domain containing 7, humanhuman

TSL 2

Gene COMMD7, Length 1,987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-204ENST00000610160 SSH2Q76I76 1423 aa30.27■■■□□ 2.44
COMMD7-204ENST00000610160 PMFBP1Q8TBY8 1022 aa30.26■■■□□ 2.44
COMMD7-204ENST00000610160 TTC21BQ7Z4L5 1316 aa30.26■■■□□ 2.43
COMMD7-204ENST00000610160 SENP3-EIF4A1A0A087X0R7 540 aa30.25■■■□□ 2.43
COMMD7-204ENST00000610160 COL3A1P02461 1466 aaPredicted RBP30.23■■■□□ 2.43
COMMD7-204ENST00000610160 C14orf37Q86TY3 774 aa30.23■■■□□ 2.43
COMMD7-204ENST00000610160 PROSER2Q86WR7 435 aaPredicted RBP30.23■■■□□ 2.43
COMMD7-204ENST00000610160 NGDNQ8NEJ9 315 aaKnown RBP30.23■■■□□ 2.43
COMMD7-204ENST00000610160 COG3Q96JB2 828 aa30.22■■■□□ 2.43
COMMD7-204ENST00000610160 MAP2P11137 1827 aaKnown RBP30.21■■■□□ 2.43
COMMD7-204ENST00000610160 ZRANB1Q9UGI0 708 aa30.21■■■□□ 2.43
COMMD7-204ENST00000610160 OVOS2A0A0J9YW53 1432 aa30.2■■■□□ 2.43
COMMD7-204ENST00000610160 OVOS2Q6IE36 1432 aa30.2■■■□□ 2.43
COMMD7-204ENST00000610160 TTC21AQ8NDW8 1320 aa30.2■■■□□ 2.42
COMMD7-204ENST00000610160 AATKQ6ZMQ8 1374 aa30.19■■■□□ 2.42
COMMD7-204ENST00000610160 SMG6Q86US8 1419 aaKnown RBP30.18■■■□□ 2.42
COMMD7-204ENST00000610160 PNPLA6Q8IY17 1366 aa30.18■■■□□ 2.42
COMMD7-204ENST00000610160 PIK3C2AO00443 1686 aa30.15■■■□□ 2.42
COMMD7-204ENST00000610160 NCOA3Q9Y6Q9 1424 aa30.15■■■□□ 2.42
COMMD7-204ENST00000610160 POLKQ9UBT6 870 aa30.15■■■□□ 2.42
COMMD7-204ENST00000610160 PHF8Q9UPP1 1060 aa30.15■■■□□ 2.42
COMMD7-204ENST00000610160 TMEM94Q12767 1356 aa30.14■■■□□ 2.42
COMMD7-204ENST00000610160 SALL2Q9Y467 1007 aaPredicted RBP30.14■■■□□ 2.41
COMMD7-204ENST00000610160 CCDC146Q8IYE0 955 aa30.13■■■□□ 2.41
COMMD7-204ENST00000610160 CDK12Q9NYV4 1490 aaPredicted RBP30.13■■■□□ 2.41
COMMD7-204ENST00000610160 C19orf44Q9H6X5 657 aa30.12■■■□□ 2.41
COMMD7-204ENST00000610160 FBLN1P23142 703 aa30.12■■■□□ 2.41
COMMD7-204ENST00000610160 USP54Q70EL1 1684 aa30.11■■■□□ 2.41
COMMD7-204ENST00000610160 DCCP43146 1447 aa30.11■■■□□ 2.41
COMMD7-204ENST00000610160 NUDCQ9Y266 331 aa30.1■■■□□ 2.41
COMMD7-204ENST00000610160 USP31Q70CQ4 1352 aa30.09■■■□□ 2.41
COMMD7-204ENST00000610160 PDE3BQ13370 1112 aa30.09■■■□□ 2.41
COMMD7-204ENST00000610160 ESCO1Q5FWF5 840 aa30.08■■■□□ 2.41
COMMD7-204ENST00000610160 EMILIN1Q9Y6C2 1016 aa30.07■■■□□ 2.4
COMMD7-204ENST00000610160 KIF1AQ12756 1690 aa30.07■■■□□ 2.4
COMMD7-204ENST00000610160 MARF1Q9Y4F3 1742 aaKnown RBP30.06■■■□□ 2.4
COMMD7-204ENST00000610160 XIRP1Q702N8 1843 aaKnown RBP30.06■■■□□ 2.4
COMMD7-204ENST00000610160 DIAPH1O60610 1272 aaKnown RBP30.06■■■□□ 2.4
COMMD7-204ENST00000610160 IQSEC2Q5JU85 1478 aa30.06■■■□□ 2.4
COMMD7-204ENST00000610160 C1orf167Q5SNV9 1468 aa30.06■■■□□ 2.4
COMMD7-204ENST00000610160 PPM1GO15355 546 aaPredicted RBP30.05■■■□□ 2.4
COMMD7-204ENST00000610160 U2AF1L5P0DN76 240 aaPredicted RBP30.05■■■□□ 2.4
COMMD7-204ENST00000610160 U2AF1Q01081 240 aaKnown RBP eCLIP30.05■■■□□ 2.4
COMMD7-204ENST00000610160 LRRC7Q96NW7 1537 aa30.05■■■□□ 2.4
COMMD7-204ENST00000610160 APAF1O14727 1248 aa30.04■■■□□ 2.4
COMMD7-204ENST00000610160 RUNDC1Q96C34 613 aa30.04■■■□□ 2.4
COMMD7-204ENST00000610160 RRS1Q15050 365 aaKnown RBP30.03■■■□□ 2.4
COMMD7-204ENST00000610160 MST1RQ04912 1400 aa30.02■■■□□ 2.4
COMMD7-204ENST00000610160 ZNF521Q96K83 1311 aa30.02■■■□□ 2.4
COMMD7-204ENST00000610160 U2SURPO15042 1029 aaKnown RBP30.01■■■□□ 2.4
COMMD7-204ENST00000610160 NGEFQ8N5V2 710 aa30.01■■■□□ 2.4
COMMD7-204ENST00000610160 ORAI2Q96SN7 254 aa30.01■■■□□ 2.4
COMMD7-204ENST00000610160 ATF3P18847 181 aa30■■■□□ 2.39
COMMD7-204ENST00000610160 SUPT16HQ9Y5B9 1047 aaKnown RBP29.99■■■□□ 2.39
COMMD7-204ENST00000610160 PEAK1Q9H792 1746 aa29.98■■■□□ 2.39
COMMD7-204ENST00000610160 MSH6P52701 1360 aa29.97■■■□□ 2.39
COMMD7-204ENST00000610160 PAK3O75914 559 aaPredicted RBP29.97■■■□□ 2.39
COMMD7-204ENST00000610160 PSME1Q06323 249 aa29.97■■■□□ 2.39
COMMD7-204ENST00000610160 ZNF335Q9H4Z2 1342 aaPredicted RBP29.97■■■□□ 2.39
COMMD7-204ENST00000610160 NLRP6P59044 892 aa29.96■■■□□ 2.39
COMMD7-204ENST00000610160 ABTB2Q8N961 1025 aa29.96■■■□□ 2.39
COMMD7-204ENST00000610160 CDCA7LQ96GN5 454 aa29.96■■■□□ 2.39
COMMD7-204ENST00000610160 TRPM3Q9HCF6 1732 aaPredicted RBP29.94■■■□□ 2.38
COMMD7-204ENST00000610160 NEFLP07196 543 aa29.94■■■□□ 2.38
COMMD7-204ENST00000610160 CADPS2Q86UW7 1296 aa29.94■■■□□ 2.38
COMMD7-204ENST00000610160 TCP11L2Q8N4U5 519 aa29.94■■■□□ 2.38
COMMD7-204ENST00000610160 IL13P35225 146 aa29.93■■■□□ 2.38
COMMD7-204ENST00000610160 FOXO3O43524 673 aa29.92■■■□□ 2.38
COMMD7-204ENST00000610160 PLEKHF1Q96S99 279 aa29.92■■■□□ 2.38
COMMD7-204ENST00000610160 SOX12O15370 315 aa29.91■■■□□ 2.38
COMMD7-204ENST00000610160 MAP3K19Q56UN5 1328 aa29.9■■■□□ 2.38
COMMD7-204ENST00000610160 GOLGA2Q08379 1002 aa29.9■■■□□ 2.38
COMMD7-204ENST00000610160 NUTM2GQ5VZR2 741 aa29.9■■■□□ 2.38
COMMD7-204ENST00000610160 DMRT2Q9Y5R5 561 aa29.9■■■□□ 2.38
COMMD7-204ENST00000610160 PNNQ9H307 717 aaKnown RBP29.88■■■□□ 2.37
COMMD7-204ENST00000610160 SBNO1A3KN83 1393 aa29.88■■■□□ 2.37
COMMD7-204ENST00000610160 FCHSD2O94868 740 aa29.88■■■□□ 2.37
COMMD7-204ENST00000610160 NCBP3Q53F19 620 aaKnown RBP29.88■■■□□ 2.37
COMMD7-204ENST00000610160 FLT4P35916 1363 aa29.87■■■□□ 2.37
COMMD7-204ENST00000610160 FKBP8Q14318 412 aa29.86■■■□□ 2.37
COMMD7-204ENST00000610160 RRP7AQ9Y3A4 280 aaKnown RBP29.86■■■□□ 2.37
COMMD7-204ENST00000610160 MAPK8IP3Q9UPT6 1336 aa29.86■■■□□ 2.37
COMMD7-204ENST00000610160 PHF23Q9BUL5 403 aaPredicted RBP29.86■■■□□ 2.37
COMMD7-204ENST00000610160 RSPH6AQ9H0K4 717 aa29.86■■■□□ 2.37
COMMD7-204ENST00000610160 WWC1Q8IX03 1113 aa29.85■■■□□ 2.37
COMMD7-204ENST00000610160 XPCQ01831 940 aaPredicted RBP29.84■■■□□ 2.37
COMMD7-204ENST00000610160 NFAT5O94916 1531 aa29.84■■■□□ 2.37
COMMD7-204ENST00000610160 RGPD1P0DJD0 1748 aa29.84■■■□□ 2.37
COMMD7-204ENST00000610160 KIF24Q5T7B8 1368 aa29.84■■■□□ 2.37
COMMD7-204ENST00000610160 CCDC27Q2M243 656 aa29.84■■■□□ 2.37
COMMD7-204ENST00000610160 EIF4A2Q14240 407 aaKnown RBP29.83■■■□□ 2.37
COMMD7-204ENST00000610160 NEUROD2Q15784 382 aa29.83■■■□□ 2.37
COMMD7-204ENST00000610160 LTN1O94822 1766 aa29.83■■■□□ 2.37
COMMD7-204ENST00000610160 HSP90AB2PQ58FF8 381 aa29.83■■■□□ 2.37
COMMD7-204ENST00000610160 KRT28Q7Z3Y7 464 aa29.83■■■□□ 2.37
COMMD7-204ENST00000610160 ALS2Q96Q42 1657 aa29.82■■■□□ 2.36
COMMD7-204ENST00000610160 SLFN5Q08AF3 891 aa29.82■■■□□ 2.36
COMMD7-204ENST00000610160 DUSP27Q5VZP5 1158 aa29.81■■■□□ 2.36
COMMD7-204ENST00000610160 PRKAR2BP31323 418 aa29.81■■■□□ 2.36
COMMD7-204ENST00000610160 SLIT3O75094 1523 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms