RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 CGNL1Q0VF96 1302 aa15.21■□□□□ 0.02
CTCFL-214ENST00000608108 NPC1L1Q9UHC9 1359 aa15.2■□□□□ 0.02
CTCFL-214ENST00000608108 CC2D1BQ5T0F9 858 aaKnown RBP15.2■□□□□ 0.02
CTCFL-214ENST00000608108 ANKRD26Q9UPS8 1709 aa15.19■□□□□ 0.02
CTCFL-214ENST00000608108 MIER1Q8N108 512 aa15.19■□□□□ 0.02
CTCFL-214ENST00000608108 SLAIN2Q9P270 581 aa15.19■□□□□ 0.02
CTCFL-214ENST00000608108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.18■□□□□ 0.02
CTCFL-214ENST00000608108 PRKRIP1Q9H875 184 aaPredicted RBP15.18■□□□□ 0.02
CTCFL-214ENST00000608108 NSD2O96028 1365 aa15.18■□□□□ 0.02
CTCFL-214ENST00000608108 SSH2Q76I76 1423 aa15.17■□□□□ 0.02
CTCFL-214ENST00000608108 PARD3Q8TEW0 1356 aa15.17■□□□□ 0.02
CTCFL-214ENST00000608108 IQSEC2Q5JU85 1478 aa15.17■□□□□ 0.02
CTCFL-214ENST00000608108 FOXO3O43524 673 aa15.16■□□□□ 0.02
CTCFL-214ENST00000608108 PSME1Q06323 249 aa15.16■□□□□ 0.02
CTCFL-214ENST00000608108 BRINP3Q76B58 766 aa15.16■□□□□ 0.02
CTCFL-214ENST00000608108 TTC21BQ7Z4L5 1316 aa15.15■□□□□ 0.02
CTCFL-214ENST00000608108 RALBP1Q15311 655 aa15.15■□□□□ 0.02
CTCFL-214ENST00000608108 TRPM3Q9HCF6 1732 aaPredicted RBP15.15■□□□□ 0.02
CTCFL-214ENST00000608108 PIK3C2AO00443 1686 aa15.15■□□□□ 0.02
CTCFL-214ENST00000608108 ROBO1Q9Y6N7 1651 aa15.15■□□□□ 0.02
CTCFL-214ENST00000608108 FYB1O15117 783 aa15.14■□□□□ 0.01
CTCFL-214ENST00000608108 BRD4O60885 1362 aaPredicted RBP15.14■□□□□ 0.01
CTCFL-214ENST00000608108 TTC21AQ8NDW8 1320 aa15.14■□□□□ 0.01
CTCFL-214ENST00000608108 NME9Q86XW9 330 aa15.14■□□□□ 0.01
CTCFL-214ENST00000608108 GGNBP2Q9H3C7 697 aa15.14■□□□□ 0.01
CTCFL-214ENST00000608108 NPHP3Q7Z494 1330 aa15.13■□□□□ 0.01
CTCFL-214ENST00000608108 XPCQ01831 940 aaPredicted RBP15.13■□□□□ 0.01
CTCFL-214ENST00000608108 NHSL1Q5SYE7 1610 aa15.13■□□□□ 0.01
CTCFL-214ENST00000608108 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
CTCFL-214ENST00000608108 MORC1Q86VD1 984 aa15.12■□□□□ 0.01
CTCFL-214ENST00000608108 DDX17Q92841 729 aaKnown RBP15.12■□□□□ 0.01
CTCFL-214ENST00000608108 PXDNQ92626 1479 aa15.11■□□□□ 0.01
CTCFL-214ENST00000608108 USP54Q70EL1 1684 aa15.11■□□□□ 0.01
CTCFL-214ENST00000608108 MYBBP1AQ9BQG0 1328 aaKnown RBP15.11■□□□□ 0.01
CTCFL-214ENST00000608108 TOM1O60784 492 aa15.1■□□□□ 0.01
CTCFL-214ENST00000608108 KRT28Q7Z3Y7 464 aa15.1■□□□□ 0.01
CTCFL-214ENST00000608108 CERKQ8TCT0 537 aa15.1■□□□□ 0.01
CTCFL-214ENST00000608108 MARF1Q9Y4F3 1742 aaKnown RBP15.1■□□□□ 0.01
CTCFL-214ENST00000608108 OVOS2A0A0J9YW53 1432 aa15.1■□□□□ 0.01
CTCFL-214ENST00000608108 OVOS2Q6IE36 1432 aa15.1■□□□□ 0.01
CTCFL-214ENST00000608108 ALS2Q96Q42 1657 aa15.1■□□□□ 0.01
CTCFL-214ENST00000608108 ABTB2Q8N961 1025 aa15.09■□□□□ 0.01
CTCFL-214ENST00000608108 COG3Q96JB2 828 aa15.09■□□□□ 0.01
CTCFL-214ENST00000608108 ZRANB1Q9UGI0 708 aa15.09■□□□□ 0.01
CTCFL-214ENST00000608108 UBAP1LF5GYI3 381 aa15.08■□□□□ 0
CTCFL-214ENST00000608108 CCER2I3L3R5 266 aa15.08■□□□□ 0
CTCFL-214ENST00000608108 TNNT2P45379 298 aaPredicted RBP15.08■□□□□ 0
CTCFL-214ENST00000608108 SBNO1A3KN83 1393 aa15.07■□□□□ 0
CTCFL-214ENST00000608108 USP31Q70CQ4 1352 aa15.07■□□□□ 0
CTCFL-214ENST00000608108 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
CTCFL-214ENST00000608108 AHDC1Q5TGY3 1603 aaPredicted RBP15.07■□□□□ 0
CTCFL-214ENST00000608108 TNS3Q68CZ2 1445 aa15.07■□□□□ 0
CTCFL-214ENST00000608108 PPP2R1AP30153 589 aa15.06■□□□□ 0
CTCFL-214ENST00000608108 NLRP6P59044 892 aa15.06■□□□□ 0
CTCFL-214ENST00000608108 MAP2P11137 1827 aaKnown RBP15.06■□□□□ 0
CTCFL-214ENST00000608108 PIP4K2BP78356 416 aa15.06■□□□□ 0
CTCFL-214ENST00000608108 NUTM2GQ5VZR2 741 aa15.06■□□□□ 0
CTCFL-214ENST00000608108 NLRP13Q86W25 1043 aa15.06■□□□□ 0
CTCFL-214ENST00000608108 SOS2Q07890 1332 aaPredicted RBP15.05■□□□□ 0
CTCFL-214ENST00000608108 LMOD2Q6P5Q4 547 aa15.05■□□□□ -0
CTCFL-214ENST00000608108 PHLPP1O60346 1717 aa15.04■□□□□ -0
CTCFL-214ENST00000608108 SPATA31A3Q5VYP0 1347 aa15.03■□□□□ -0
CTCFL-214ENST00000608108 ARHGEF10O15013 1369 aa15.03■□□□□ -0
CTCFL-214ENST00000608108 MRS2Q9HD23 443 aa15.03■□□□□ -0
CTCFL-214ENST00000608108 AATKQ6ZMQ8 1374 aa15.02■□□□□ -0
CTCFL-214ENST00000608108 CCDC184Q52MB2 194 aa15.02□□□□□ -0.01
CTCFL-214ENST00000608108 SLIT3O75094 1523 aa15.02□□□□□ -0.01
CTCFL-214ENST00000608108 SOX12O15370 315 aa15.01□□□□□ -0.01
CTCFL-214ENST00000608108 MED1Q15648 1581 aaPredicted RBP15.01□□□□□ -0.01
CTCFL-214ENST00000608108 PHRF1Q9P1Y6 1649 aaKnown RBP15.01□□□□□ -0.01
CTCFL-214ENST00000608108 CRYBG1Q9Y4K1 1723 aa15.01□□□□□ -0.01
CTCFL-214ENST00000608108 LTN1O94822 1766 aa15□□□□□ -0.01
CTCFL-214ENST00000608108 COL16A1Q07092 1604 aaPredicted RBP15□□□□□ -0.01
CTCFL-214ENST00000608108 FBLN1P23142 703 aa15□□□□□ -0.01
CTCFL-214ENST00000608108 NFAT5O94916 1531 aa15□□□□□ -0.01
CTCFL-214ENST00000608108 SMG6Q86US8 1419 aaKnown RBP15□□□□□ -0.01
CTCFL-214ENST00000608108 USP19O94966 1318 aa14.99□□□□□ -0.01
CTCFL-214ENST00000608108 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
CTCFL-214ENST00000608108 MTHFSP49914 203 aa14.99□□□□□ -0.01
CTCFL-214ENST00000608108 RRS1Q15050 365 aaKnown RBP14.99□□□□□ -0.01
CTCFL-214ENST00000608108 ABCA3Q99758 1704 aa14.99□□□□□ -0.01
CTCFL-214ENST00000608108 KCNH5Q8NCM2 988 aa14.98□□□□□ -0.01
CTCFL-214ENST00000608108 POLKQ9UBT6 870 aa14.98□□□□□ -0.01
CTCFL-214ENST00000608108 PEAK1Q9H792 1746 aa14.97□□□□□ -0.01
CTCFL-214ENST00000608108 LRRC59Q96AG4 307 aaKnown RBP14.97□□□□□ -0.01
CTCFL-214ENST00000608108 EMILIN1Q9Y6C2 1016 aa14.97□□□□□ -0.01
CTCFL-214ENST00000608108 CDK12Q9NYV4 1490 aaPredicted RBP14.97□□□□□ -0.01
CTCFL-214ENST00000608108 PPM1GO15355 546 aaPredicted RBP14.96□□□□□ -0.01
CTCFL-214ENST00000608108 C1QBPQ07021 282 aaKnown RBP14.96□□□□□ -0.01
CTCFL-214ENST00000608108 GCP02774 474 aa14.95□□□□□ -0.02
CTCFL-214ENST00000608108 CFAP53Q96M91 514 aa14.95□□□□□ -0.02
CTCFL-214ENST00000608108 COL22A1Q8NFW1 1626 aaPredicted RBP14.95□□□□□ -0.02
CTCFL-214ENST00000608108 MAP3K19Q56UN5 1328 aa14.95□□□□□ -0.02
CTCFL-214ENST00000608108 SHPRHQ149N8 1683 aa14.95□□□□□ -0.02
CTCFL-214ENST00000608108 COL3A1P02461 1466 aaPredicted RBP14.95□□□□□ -0.02
CTCFL-214ENST00000608108 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
CTCFL-214ENST00000608108 CABLES1Q8TDN4 633 aa14.94□□□□□ -0.02
CTCFL-214ENST00000608108 PNPLA6Q8IY17 1366 aa14.94□□□□□ -0.02
CTCFL-214ENST00000608108 FLT4P35916 1363 aa14.93□□□□□ -0.02
CTCFL-214ENST00000608108 PNISRQ8TF01 805 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms