RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 SRPK2P78362 688 aaKnown RBP27.28■■□□□ 1.96
SRSF4-206ENST00000605204 NGDNQ8NEJ9 315 aaKnown RBP27.28■■□□□ 1.96
SRSF4-206ENST00000605204 SLIT2O94813 1529 aa27.26■■□□□ 1.95
SRSF4-206ENST00000605204 TOPAZ1Q8N9V7 1692 aa27.25■■□□□ 1.95
SRSF4-206ENST00000605204 POLR3AO14802 1390 aaPredicted RBP27.25■■□□□ 1.95
SRSF4-206ENST00000605204 PLEKHG3A1L390 1219 aa27.24■■□□□ 1.95
SRSF4-206ENST00000605204 BRWD3Q6RI45 1802 aa27.23■■□□□ 1.95
SRSF4-206ENST00000605204 CCER1Q8TC90 406 aaPredicted RBP27.22■■□□□ 1.95
SRSF4-206ENST00000605204 SLC24A1O60721 1099 aa27.21■■□□□ 1.95
SRSF4-206ENST00000605204 TRPM3Q9HCF6 1732 aaPredicted RBP27.2■■□□□ 1.95
SRSF4-206ENST00000605204 PPIP5K1Q6PFW1 1433 aa27.2■■□□□ 1.94
SRSF4-206ENST00000605204 BRD4O60885 1362 aaPredicted RBP27.19■■□□□ 1.94
SRSF4-206ENST00000605204 CABP2Q9NPB3 220 aa27.19■■□□□ 1.94
SRSF4-206ENST00000605204 NWD2Q9ULI1 1742 aa27.18■■□□□ 1.94
SRSF4-206ENST00000605204 ACEP12821 1306 aa27.17■■□□□ 1.94
SRSF4-206ENST00000605204 LMOD2Q6P5Q4 547 aa27.17■■□□□ 1.94
SRSF4-206ENST00000605204 NRAPQ86VF7 1730 aa27.16■■□□□ 1.94
SRSF4-206ENST00000605204 HAP1P54257 671 aaPredicted RBP27.15■■□□□ 1.94
SRSF4-206ENST00000605204 GJD4Q96KN9 370 aaPredicted RBP27.15■■□□□ 1.94
SRSF4-206ENST00000605204 ALS2Q96Q42 1657 aa27.14■■□□□ 1.94
SRSF4-206ENST00000605204 PAK3O75914 559 aaPredicted RBP27.12■■□□□ 1.93
SRSF4-206ENST00000605204 CRYBG1Q9Y4K1 1723 aa27.12■■□□□ 1.93
SRSF4-206ENST00000605204 UNC5CLQ8IV45 518 aa27.1■■□□□ 1.93
SRSF4-206ENST00000605204 CABLES1Q8TDN4 633 aa27.1■■□□□ 1.93
SRSF4-206ENST00000605204 PUS7Q96PZ0 661 aaKnown RBP27.1■■□□□ 1.93
SRSF4-206ENST00000605204 CABP1Q9NZU7 370 aa27.09■■□□□ 1.93
SRSF4-206ENST00000605204 PLEKHG5O94827 1062 aa27.08■■□□□ 1.93
SRSF4-206ENST00000605204 USP6P35125 1406 aa27.06■■□□□ 1.92
SRSF4-206ENST00000605204 USP47Q96K76 1375 aa27.06■■□□□ 1.92
SRSF4-206ENST00000605204 ZNF692Q9BU19 519 aaPredicted RBP27.06■■□□□ 1.92
SRSF4-206ENST00000605204 ST20-MTHFSA0A0A6YYL1 179 aa27.04■■□□□ 1.92
SRSF4-206ENST00000605204 TESK2Q96S53 571 aa27.03■■□□□ 1.92
SRSF4-206ENST00000605204 NINLQ9Y2I6 1382 aa27.02■■□□□ 1.92
SRSF4-206ENST00000605204 BLMP54132 1417 aaPredicted RBP27.02■■□□□ 1.92
SRSF4-206ENST00000605204 ABTB2Q8N961 1025 aa27.01■■□□□ 1.91
SRSF4-206ENST00000605204 COL14A1Q05707 1796 aaKnown RBP27■■□□□ 1.91
SRSF4-206ENST00000605204 CPSF1Q10570 1443 aaKnown RBP27■■□□□ 1.91
SRSF4-206ENST00000605204 NLRP13Q86W25 1043 aa26.99■■□□□ 1.91
SRSF4-206ENST00000605204 SSH2Q76I76 1423 aa26.99■■□□□ 1.91
SRSF4-206ENST00000605204 VPS72Q15906 364 aa26.98■■□□□ 1.91
SRSF4-206ENST00000605204 USP19O94966 1318 aa26.97■■□□□ 1.91
SRSF4-206ENST00000605204 TTC21AQ8NDW8 1320 aa26.96■■□□□ 1.91
SRSF4-206ENST00000605204 PHRF1Q9P1Y6 1649 aaKnown RBP26.96■■□□□ 1.91
SRSF4-206ENST00000605204 TMF1P82094 1093 aa26.96■■□□□ 1.91
SRSF4-206ENST00000605204 CDCA8Q53HL2 280 aa26.96■■□□□ 1.91
SRSF4-206ENST00000605204 SEPT12Q8IYM1 358 aa26.96■■□□□ 1.91
SRSF4-206ENST00000605204 ZRANB1Q9UGI0 708 aa26.96■■□□□ 1.91
SRSF4-206ENST00000605204 KTN1Q86UP2 1357 aaKnown RBP26.94■■□□□ 1.9
SRSF4-206ENST00000605204 CCDC125Q86Z20 511 aa26.94■■□□□ 1.9
SRSF4-206ENST00000605204 TERF2IPQ9NYB0 399 aa26.94■■□□□ 1.9
SRSF4-206ENST00000605204 THSD7AQ9UPZ6 1657 aa26.93■■□□□ 1.9
SRSF4-206ENST00000605204 FAM83GA6ND36 823 aa26.93■■□□□ 1.9
SRSF4-206ENST00000605204 HDGFL2Q7Z4V5 671 aaPredicted RBP26.93■■□□□ 1.9
SRSF4-206ENST00000605204 DEFB132Q7Z7B7 95 aa26.93■■□□□ 1.9
SRSF4-206ENST00000605204 PRDM11Q9NQV5 511 aa26.93■■□□□ 1.9
SRSF4-206ENST00000605204 TMC1Q8TDI8 760 aa26.92■■□□□ 1.9
SRSF4-206ENST00000605204 AKAP12Q02952 1782 aa26.92■■□□□ 1.9
SRSF4-206ENST00000605204 CPDO75976 1380 aa26.91■■□□□ 1.9
SRSF4-206ENST00000605204 TTC21BQ7Z4L5 1316 aa26.91■■□□□ 1.9
SRSF4-206ENST00000605204 NUTM2GQ5VZR2 741 aa26.9■■□□□ 1.9
SRSF4-206ENST00000605204 CCDC9Q9Y3X0 531 aaKnown RBP26.9■■□□□ 1.9
SRSF4-206ENST00000605204 NRKQ7Z2Y5 1582 aa26.9■■□□□ 1.9
SRSF4-206ENST00000605204 NLRP6P59044 892 aa26.89■■□□□ 1.9
SRSF4-206ENST00000605204 KIAA0232Q92628 1395 aa26.89■■□□□ 1.89
SRSF4-206ENST00000605204 CD163L1Q9NR16 1453 aa26.88■■□□□ 1.89
SRSF4-206ENST00000605204 TNS1Q9HBL0 1735 aaKnown RBP26.88■■□□□ 1.89
SRSF4-206ENST00000605204 EDC4Q6P2E9 1401 aaKnown RBP26.87■■□□□ 1.89
SRSF4-206ENST00000605204 SLIT3O75094 1523 aa26.87■■□□□ 1.89
SRSF4-206ENST00000605204 MON2Q7Z3U7 1717 aa26.87■■□□□ 1.89
SRSF4-206ENST00000605204 ONECUT3O60422 494 aaPredicted RBP26.86■■□□□ 1.89
SRSF4-206ENST00000605204 GCP02774 474 aa26.86■■□□□ 1.89
SRSF4-206ENST00000605204 SLC12A5Q9H2X9 1139 aa26.86■■□□□ 1.89
SRSF4-206ENST00000605204 BTG4Q9NY30 223 aa26.86■■□□□ 1.89
SRSF4-206ENST00000605204 LRP5O75197 1615 aa26.86■■□□□ 1.89
SRSF4-206ENST00000605204 RGPD1P0DJD0 1748 aa26.86■■□□□ 1.89
SRSF4-206ENST00000605204 PIK3C2AO00443 1686 aa26.85■■□□□ 1.89
SRSF4-206ENST00000605204 KRT27Q7Z3Y8 459 aa26.84■■□□□ 1.89
SRSF4-206ENST00000605204 KCNH5Q8NCM2 988 aa26.84■■□□□ 1.89
SRSF4-206ENST00000605204 A0A1W2PP64 1363 aa26.84■■□□□ 1.89
SRSF4-206ENST00000605204 EIF4G2P78344 907 aaKnown RBP eCLIP26.84■■□□□ 1.89
SRSF4-206ENST00000605204 ZC3H6P61129 1189 aaKnown RBP26.83■■□□□ 1.88
SRSF4-206ENST00000605204 FAM98CQ17RN3 349 aaKnown RBP26.83■■□□□ 1.88
SRSF4-206ENST00000605204 USP31Q70CQ4 1352 aa26.81■■□□□ 1.88
SRSF4-206ENST00000605204 ANKRD36BQ8N2N9 1353 aa26.81■■□□□ 1.88
SRSF4-206ENST00000605204 A0A0G2JS52 829 aa26.81■■□□□ 1.88
SRSF4-206ENST00000605204 MYT1Q01538 1121 aa26.81■■□□□ 1.88
SRSF4-206ENST00000605204 CHRNA2Q15822 529 aa26.77■■□□□ 1.88
SRSF4-206ENST00000605204 SPATA31A5Q5VU36 1347 aa26.77■■□□□ 1.88
SRSF4-206ENST00000605204 SPATA31A7Q8IWB4 1347 aa26.77■■□□□ 1.88
SRSF4-206ENST00000605204 AATKQ6ZMQ8 1374 aa26.77■■□□□ 1.88
SRSF4-206ENST00000605204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.76■■□□□ 1.87
SRSF4-206ENST00000605204 USP54Q70EL1 1684 aa26.76■■□□□ 1.87
SRSF4-206ENST00000605204 SF3B2Q13435 895 aaKnown RBP26.75■■□□□ 1.87
SRSF4-206ENST00000605204 FAM182BQ5T319 152 aa26.75■■□□□ 1.87
SRSF4-206ENST00000605204 LMO7Q8WWI1 1683 aa26.75■■□□□ 1.87
SRSF4-206ENST00000605204 ABCC6O95255 1503 aa26.73■■□□□ 1.87
SRSF4-206ENST00000605204 EVA1CP58658 441 aa26.71■■□□□ 1.87
SRSF4-206ENST00000605204 NME9Q86XW9 330 aa26.71■■□□□ 1.87
SRSF4-206ENST00000605204 CAMTA1Q9Y6Y1 1673 aa26.71■■□□□ 1.87
SRSF4-206ENST00000605204 NFAT5O94916 1531 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms