RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 ARHGEF10LQ9HCE6 1279 aa7.34□□□□□ -1.23
COL4A3BP-207ENST00000604926 ZNF777Q9ULD5 760 aaPredicted RBP7.34□□□□□ -1.23
COL4A3BP-207ENST00000604926 CTDP1Q9Y5B0 961 aaPredicted RBP7.34□□□□□ -1.23
COL4A3BP-207ENST00000604926 KAT6BQ8WYB5 2073 aa7.34□□□□□ -1.24
COL4A3BP-207ENST00000604926 KIAA1522Q9P206 1035 aaPredicted RBP7.33□□□□□ -1.24
COL4A3BP-207ENST00000604926 PREX2Q70Z35 1606 aa7.33□□□□□ -1.24
COL4A3BP-207ENST00000604926 TDO2P48775 406 aa7.33□□□□□ -1.24
COL4A3BP-207ENST00000604926 MKL1Q969V6 931 aa7.33□□□□□ -1.24
COL4A3BP-207ENST00000604926 GABBR1Q9UBS5 961 aa7.33□□□□□ -1.24
COL4A3BP-207ENST00000604926 RNF17Q9BXT8 1623 aaKnown RBP7.33□□□□□ -1.24
COL4A3BP-207ENST00000604926 TRAK2O60296 914 aa7.33□□□□□ -1.24
COL4A3BP-207ENST00000604926 PARNO95453 639 aaKnown RBP7.33□□□□□ -1.24
COL4A3BP-207ENST00000604926 MCCD1P59942 119 aaPredicted RBP7.33□□□□□ -1.24
COL4A3BP-207ENST00000604926 WDR78Q5VTH9 848 aa7.33□□□□□ -1.24
COL4A3BP-207ENST00000604926 CDCA7Q9BWT1 371 aaPredicted RBP7.33□□□□□ -1.24
COL4A3BP-207ENST00000604926 UBA5Q9GZZ9 404 aa7.33□□□□□ -1.24
COL4A3BP-207ENST00000604926 IGF1RP08069 1367 aa7.32□□□□□ -1.24
COL4A3BP-207ENST00000604926 MAST1Q9Y2H9 1570 aa7.32□□□□□ -1.24
COL4A3BP-207ENST00000604926 SIGLEC1Q9BZZ2 1709 aa7.32□□□□□ -1.24
COL4A3BP-207ENST00000604926 KCNA1Q09470 495 aa7.32□□□□□ -1.24
COL4A3BP-207ENST00000604926 RAPGEF6Q8TEU7 1601 aa7.32□□□□□ -1.24
COL4A3BP-207ENST00000604926 EXOC5O00471 708 aa7.32□□□□□ -1.24
COL4A3BP-207ENST00000604926 ZCRB1Q8TBF4 217 aaKnown RBP7.32□□□□□ -1.24
COL4A3BP-207ENST00000604926 SPOCK3Q9BQ16 436 aa7.32□□□□□ -1.24
COL4A3BP-207ENST00000604926 STK10O94804 968 aaKnown RBP7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 NOP58Q9Y2X3 529 aaKnown RBP7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 PUS10Q3MIT2 529 aaKnown RBP7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 METTL14Q9HCE5 456 aaKnown RBP7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 AMOTL2Q9Y2J4 779 aa7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 ARIH1Q9Y4X5 557 aaPredicted RBP7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 PTPRMP28827 1452 aa7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 CDK12Q9NYV4 1490 aaPredicted RBP7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 NPATQ14207 1427 aa7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 NEXNQ0ZGT2 675 aa7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 CACTIN-AS1Q8N1I8 211 aa7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 HELBQ8NG08 1087 aaPredicted RBP7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 BSDC1Q9NW68 430 aaPredicted RBP7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 INO80Q9ULG1 1556 aaPredicted RBP7.31□□□□□ -1.24
COL4A3BP-207ENST00000604926 BDNFP23560 247 aa7.3□□□□□ -1.24
COL4A3BP-207ENST00000604926 DMTNQ08495 405 aa7.3□□□□□ -1.24
COL4A3BP-207ENST00000604926 ZRSR2Q15696 482 aaKnown RBP7.3□□□□□ -1.24
COL4A3BP-207ENST00000604926 ZBTB9Q96C00 473 aa7.3□□□□□ -1.24
COL4A3BP-207ENST00000604926 CALR3Q96L12 384 aaKnown RBP7.3□□□□□ -1.24
COL4A3BP-207ENST00000604926 MAF1Q9H063 256 aa7.3□□□□□ -1.24
COL4A3BP-207ENST00000604926 FEZ2Q9UHY8 353 aaPredicted RBP7.3□□□□□ -1.24
COL4A3BP-207ENST00000604926 TNNT2P45379 298 aaPredicted RBP7.3□□□□□ -1.24
COL4A3BP-207ENST00000604926 MAGEC2Q9UBF1 373 aaPredicted RBP7.3□□□□□ -1.24
COL4A3BP-207ENST00000604926 SLC20A2Q08357 652 aa7.29□□□□□ -1.24
COL4A3BP-207ENST00000604926 HECW1Q76N89 1606 aa7.29□□□□□ -1.24
COL4A3BP-207ENST00000604926 TTC30BQ8N4P2 665 aa7.29□□□□□ -1.24
COL4A3BP-207ENST00000604926 ANP32AP39687 249 aaKnown RBP7.29□□□□□ -1.24
COL4A3BP-207ENST00000604926 NUTM2GQ5VZR2 741 aa7.28□□□□□ -1.24
COL4A3BP-207ENST00000604926 MADDQ8WXG6 1647 aa7.28□□□□□ -1.24
COL4A3BP-207ENST00000604926 KDM5DQ9BY66 1539 aa7.28□□□□□ -1.24
COL4A3BP-207ENST00000604926 LIG1P18858 919 aa7.28□□□□□ -1.24
COL4A3BP-207ENST00000604926 PUF60Q9UHX1 559 aaKnown RBP7.28□□□□□ -1.24
COL4A3BP-207ENST00000604926 TPX2Q9ULW0 747 aaKnown RBP7.28□□□□□ -1.24
COL4A3BP-207ENST00000604926 DMRT2Q9Y5R5 561 aa7.28□□□□□ -1.24
COL4A3BP-207ENST00000604926 C1QTNF12Q5T7M4 302 aa7.28□□□□□ -1.24
COL4A3BP-207ENST00000604926 DRC1Q96MC2 740 aa7.28□□□□□ -1.24
COL4A3BP-207ENST00000604926 U2SURPO15042 1029 aaKnown RBP7.27□□□□□ -1.25
COL4A3BP-207ENST00000604926 KIF20AO95235 890 aa7.27□□□□□ -1.25
COL4A3BP-207ENST00000604926 C11orf96Q7Z7L8 435 aa7.27□□□□□ -1.25
COL4A3BP-207ENST00000604926 KDM4CQ9H3R0 1056 aa7.27□□□□□ -1.25
COL4A3BP-207ENST00000604926 NRBP1Q9UHY1 535 aa7.27□□□□□ -1.25
COL4A3BP-207ENST00000604926 SMC3Q9UQE7 1217 aa7.27□□□□□ -1.25
COL4A3BP-207ENST00000604926 SPHKAPQ2M3C7 1700 aa7.27□□□□□ -1.25
COL4A3BP-207ENST00000604926 NWD1Q149M9 1564 aa7.27□□□□□ -1.25
COL4A3BP-207ENST00000604926 CCDC194A0A1B0GVG4 234 aa7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 GYS2P54840 703 aa7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 SMC5Q8IY18 1101 aa7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 C3P01024 1663 aa7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 CARNS1A5YM72 827 aa7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 MPHOSPH10O00566 681 aaKnown RBP7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 ITFG2Q969R8 447 aa7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 FAM117AQ9C073 453 aa7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 IRF2BPLQ9H1B7 796 aa7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 WDHD1O75717 1129 aaPredicted RBP7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 PDE6BP35913 854 aa7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 CCT2P78371 535 aaKnown RBP7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 GNL3LQ9NVN8 582 aaKnown RBP7.26□□□□□ -1.25
COL4A3BP-207ENST00000604926 MED1Q15648 1581 aaPredicted RBP7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 ZRANB2O95218 330 aaKnown RBP eCLIP7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 ACRBPQ8NEB7 543 aa7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 PDZRN3Q9UPQ7 1066 aa7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 CEP83Q9Y592 693 aa7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 MROH1Q8NDA8 1641 aa7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 CSB-PGBD3P0DP91 1061 aa7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 NAT1P18440 290 aa7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 SF3A1Q15459 793 aaKnown RBP7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 LRRIQ1Q96JM4 1722 aa7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 ZC3H12AQ5D1E8 599 aaKnown RBP7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 MFSD4BQ5TF39 518 aa7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 SREK1Q8WXA9 508 aaKnown RBP7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 CCDC94Q9BW85 323 aaPredicted RBP7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 PNNQ9H307 717 aaKnown RBP7.25□□□□□ -1.25
COL4A3BP-207ENST00000604926 CT47A1Q5JQC4 288 aaPredicted RBP7.24□□□□□ -1.25
COL4A3BP-207ENST00000604926 HDGFL1Q5TGJ6 251 aa7.24□□□□□ -1.25
COL4A3BP-207ENST00000604926 RPAINQ86UA6 219 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms