RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 ITSN1Q15811 1721 aa14.29□□□□□ -0.12
LINC01235-201ENST00000604724 NUTM2FA1L443 756 aa14.29□□□□□ -0.12
LINC01235-201ENST00000604724 SLFN5Q08AF3 891 aa14.29□□□□□ -0.12
LINC01235-201ENST00000604724 DIP2AQ14689 1571 aa14.29□□□□□ -0.12
LINC01235-201ENST00000604724 RRP7AQ9Y3A4 280 aaKnown RBP14.29□□□□□ -0.12
LINC01235-201ENST00000604724 TOPAZ1Q8N9V7 1692 aa14.28□□□□□ -0.12
LINC01235-201ENST00000604724 NME9Q86XW9 330 aa14.28□□□□□ -0.12
LINC01235-201ENST00000604724 RUNDC1Q96C34 613 aa14.28□□□□□ -0.12
LINC01235-201ENST00000604724 U2AF1L5P0DN76 240 aaPredicted RBP14.27□□□□□ -0.12
LINC01235-201ENST00000604724 U2AF1Q01081 240 aaKnown RBP eCLIP14.27□□□□□ -0.12
LINC01235-201ENST00000604724 ZRANB1Q9UGI0 708 aa14.27□□□□□ -0.12
LINC01235-201ENST00000604724 PTCH1Q13635 1447 aa14.27□□□□□ -0.12
LINC01235-201ENST00000604724 XRN1Q8IZH2 1706 aaKnown RBP14.27□□□□□ -0.12
LINC01235-201ENST00000604724 NEUROD2Q15784 382 aa14.27□□□□□ -0.13
LINC01235-201ENST00000604724 TRMT2AQ8IZ69 625 aaKnown RBP14.27□□□□□ -0.13
LINC01235-201ENST00000604724 TCP11L2Q8N4U5 519 aa14.27□□□□□ -0.13
LINC01235-201ENST00000604724 NKTRP30414 1462 aaKnown RBP14.27□□□□□ -0.13
LINC01235-201ENST00000604724 ZNF142P52746 1687 aaPredicted RBP14.27□□□□□ -0.13
LINC01235-201ENST00000604724 PLIN1O60240 522 aa14.26□□□□□ -0.13
LINC01235-201ENST00000604724 WWC1Q8IX03 1113 aa14.26□□□□□ -0.13
LINC01235-201ENST00000604724 PNPLA6Q8IY17 1366 aa14.25□□□□□ -0.13
LINC01235-201ENST00000604724 MAP2P11137 1827 aaKnown RBP14.25□□□□□ -0.13
LINC01235-201ENST00000604724 U2SURPO15042 1029 aaKnown RBP14.25□□□□□ -0.13
LINC01235-201ENST00000604724 NRKQ7Z2Y5 1582 aa14.25□□□□□ -0.13
LINC01235-201ENST00000604724 POLKQ9UBT6 870 aa14.24□□□□□ -0.13
LINC01235-201ENST00000604724 NGEFQ8N5V2 710 aa14.24□□□□□ -0.13
LINC01235-201ENST00000604724 EXOC6Q8TAG9 804 aa14.24□□□□□ -0.13
LINC01235-201ENST00000604724 KCNA6P17658 529 aa14.23□□□□□ -0.13
LINC01235-201ENST00000604724 PHF23Q9BUL5 403 aaPredicted RBP14.23□□□□□ -0.13
LINC01235-201ENST00000604724 ACEP12821 1306 aa14.23□□□□□ -0.13
LINC01235-201ENST00000604724 E9PSI1 815 aa14.23□□□□□ -0.13
LINC01235-201ENST00000604724 PPM1GO15355 546 aaPredicted RBP14.23□□□□□ -0.13
LINC01235-201ENST00000604724 RGPD8O14715 1765 aaPredicted RBP14.22□□□□□ -0.13
LINC01235-201ENST00000604724 EMILIN1Q9Y6C2 1016 aa14.22□□□□□ -0.13
LINC01235-201ENST00000604724 DIAPH1O60610 1272 aaKnown RBP14.21□□□□□ -0.13
LINC01235-201ENST00000604724 PLEKHF1Q96S99 279 aa14.21□□□□□ -0.13
LINC01235-201ENST00000604724 ZNF692Q9BU19 519 aaPredicted RBP14.21□□□□□ -0.13
LINC01235-201ENST00000604724 CCDC136Q96JN2 1154 aa14.21□□□□□ -0.13
LINC01235-201ENST00000604724 PLEKHG3A1L390 1219 aa14.2□□□□□ -0.14
LINC01235-201ENST00000604724 C20orf194Q5TEA3 1177 aa14.2□□□□□ -0.14
LINC01235-201ENST00000604724 ANKLE2Q86XL3 938 aa14.2□□□□□ -0.14
LINC01235-201ENST00000604724 COG3Q96JB2 828 aa14.2□□□□□ -0.14
LINC01235-201ENST00000604724 USP6P35125 1406 aa14.19□□□□□ -0.14
LINC01235-201ENST00000604724 SETD1BQ9UPS6 1966 aaKnown RBP14.19□□□□□ -0.14
LINC01235-201ENST00000604724 TTC21BQ7Z4L5 1316 aa14.19□□□□□ -0.14
LINC01235-201ENST00000604724 PIK3R4Q99570 1358 aa14.19□□□□□ -0.14
LINC01235-201ENST00000604724 PMFBP1Q8TBY8 1022 aa14.19□□□□□ -0.14
LINC01235-201ENST00000604724 LRRC7Q96NW7 1537 aa14.19□□□□□ -0.14
LINC01235-201ENST00000604724 AATKQ6ZMQ8 1374 aa14.18□□□□□ -0.14
LINC01235-201ENST00000604724 RRS1Q15050 365 aaKnown RBP14.18□□□□□ -0.14
LINC01235-201ENST00000604724 CCDC27Q2M243 656 aa14.18□□□□□ -0.14
LINC01235-201ENST00000604724 CHD2O14647 1828 aaKnown RBP14.18□□□□□ -0.14
LINC01235-201ENST00000604724 CDK12Q9NYV4 1490 aaPredicted RBP14.17□□□□□ -0.14
LINC01235-201ENST00000604724 CRBNQ96SW2 442 aa14.17□□□□□ -0.14
LINC01235-201ENST00000604724 OVOS2A0A0J9YW53 1432 aa14.17□□□□□ -0.14
LINC01235-201ENST00000604724 OVOS2Q6IE36 1432 aa14.17□□□□□ -0.14
LINC01235-201ENST00000604724 SSH2Q76I76 1423 aa14.17□□□□□ -0.14
LINC01235-201ENST00000604724 NALCNQ8IZF0 1738 aa14.16□□□□□ -0.14
LINC01235-201ENST00000604724 BCAR3O75815 825 aa14.16□□□□□ -0.14
LINC01235-201ENST00000604724 WDR63Q8IWG1 891 aa14.16□□□□□ -0.14
LINC01235-201ENST00000604724 RBM33Q96EV2 1170 aaKnown RBP14.16□□□□□ -0.14
LINC01235-201ENST00000604724 FMN2Q9NZ56 1722 aa14.15□□□□□ -0.14
LINC01235-201ENST00000604724 TMPOP42166 694 aaKnown RBP14.15□□□□□ -0.14
LINC01235-201ENST00000604724 MAPK8IP3Q9UPT6 1336 aa14.15□□□□□ -0.14
LINC01235-201ENST00000604724 TRIM35Q9UPQ4 493 aa14.15□□□□□ -0.14
LINC01235-201ENST00000604724 RSPH6AQ9H0K4 717 aa14.14□□□□□ -0.15
LINC01235-201ENST00000604724 HMOX1P09601 288 aa14.14□□□□□ -0.15
LINC01235-201ENST00000604724 IL13P35225 146 aa14.14□□□□□ -0.15
LINC01235-201ENST00000604724 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
LINC01235-201ENST00000604724 DAXXQ9UER7 740 aaPredicted RBP14.13□□□□□ -0.15
LINC01235-201ENST00000604724 FCHSD2O94868 740 aa14.13□□□□□ -0.15
LINC01235-201ENST00000604724 PRKAR2BP31323 418 aa14.13□□□□□ -0.15
LINC01235-201ENST00000604724 ANKARQ7Z5J8 1434 aa14.12□□□□□ -0.15
LINC01235-201ENST00000604724 NGDNQ8NEJ9 315 aaKnown RBP14.12□□□□□ -0.15
LINC01235-201ENST00000604724 PEAK1Q9H792 1746 aa14.12□□□□□ -0.15
LINC01235-201ENST00000604724 NPHP4O75161 1426 aaPredicted RBP14.12□□□□□ -0.15
LINC01235-201ENST00000604724 PIK3C2AO00443 1686 aa14.11□□□□□ -0.15
LINC01235-201ENST00000604724 SOX12O15370 315 aa14.11□□□□□ -0.15
LINC01235-201ENST00000604724 RIPK4P57078 832 aa14.11□□□□□ -0.15
LINC01235-201ENST00000604724 PHACTR3Q96KR7 559 aa14.11□□□□□ -0.15
LINC01235-201ENST00000604724 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
LINC01235-201ENST00000604724 TSR2Q969E8 191 aaKnown RBP14.1□□□□□ -0.15
LINC01235-201ENST00000604724 USP31Q70CQ4 1352 aa14.1□□□□□ -0.15
LINC01235-201ENST00000604724 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.1□□□□□ -0.15
LINC01235-201ENST00000604724 PNNQ9H307 717 aaKnown RBP14.09□□□□□ -0.15
LINC01235-201ENST00000604724 RBM19Q9Y4C8 960 aaKnown RBP14.09□□□□□ -0.15
LINC01235-201ENST00000604724 TTC21AQ8NDW8 1320 aa14.09□□□□□ -0.15
LINC01235-201ENST00000604724 FANCIQ9NVI1 1328 aa14.09□□□□□ -0.15
LINC01235-201ENST00000604724 POTEDQ86YR6 584 aa14.09□□□□□ -0.15
LINC01235-201ENST00000604724 MYH16Q9H6N6 1097 aa14.09□□□□□ -0.15
LINC01235-201ENST00000604724 RARSP54136 660 aaKnown RBP14.08□□□□□ -0.16
LINC01235-201ENST00000604724 EIF4A2Q14240 407 aaKnown RBP14.07□□□□□ -0.16
LINC01235-201ENST00000604724 HSP90AB2PQ58FF8 381 aa14.07□□□□□ -0.16
LINC01235-201ENST00000604724 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
LINC01235-201ENST00000604724 ADGRL3Q9HAR2 1447 aa14.07□□□□□ -0.16
LINC01235-201ENST00000604724 BCL2L13Q9BXK5 485 aa14.07□□□□□ -0.16
LINC01235-201ENST00000604724 AEBP1Q8IUX7 1158 aa14.06□□□□□ -0.16
LINC01235-201ENST00000604724 MAP3K19Q56UN5 1328 aa14.05□□□□□ -0.16
LINC01235-201ENST00000604724 NFE2L2Q16236 605 aa14.05□□□□□ -0.16
LINC01235-201ENST00000604724 NUTM2GQ5VZR2 741 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms