RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 SPATA31A3Q5VYP0 1347 aa13.19□□□□□ -0.3
SQSTM1P1-201ENST00000603451 KRT28Q7Z3Y7 464 aa13.19□□□□□ -0.3
SQSTM1P1-201ENST00000603451 PMFBP1Q8TBY8 1022 aa13.19□□□□□ -0.3
SQSTM1P1-201ENST00000603451 CABP1Q9NZU7 370 aa13.19□□□□□ -0.3
SQSTM1P1-201ENST00000603451 MARF1Q9Y4F3 1742 aaKnown RBP13.19□□□□□ -0.3
SQSTM1P1-201ENST00000603451 PIK3C2AO00443 1686 aa13.18□□□□□ -0.3
SQSTM1P1-201ENST00000603451 TTC21AQ8NDW8 1320 aa13.18□□□□□ -0.3
SQSTM1P1-201ENST00000603451 HDGFL2Q7Z4V5 671 aaPredicted RBP13.18□□□□□ -0.3
SQSTM1P1-201ENST00000603451 A0A1W2PP64 1363 aa13.18□□□□□ -0.3
SQSTM1P1-201ENST00000603451 KTN1Q86UP2 1357 aaKnown RBP13.18□□□□□ -0.3
SQSTM1P1-201ENST00000603451 PHRF1Q9P1Y6 1649 aaKnown RBP13.17□□□□□ -0.3
SQSTM1P1-201ENST00000603451 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
SQSTM1P1-201ENST00000603451 DDX17Q92841 729 aaKnown RBP13.15□□□□□ -0.3
SQSTM1P1-201ENST00000603451 SLIT3O75094 1523 aa13.14□□□□□ -0.31
SQSTM1P1-201ENST00000603451 TMC1Q8TDI8 760 aa13.14□□□□□ -0.31
SQSTM1P1-201ENST00000603451 KIF7Q2M1P5 1343 aa13.13□□□□□ -0.31
SQSTM1P1-201ENST00000603451 ANKRD26Q9UPS8 1709 aa13.13□□□□□ -0.31
SQSTM1P1-201ENST00000603451 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
SQSTM1P1-201ENST00000603451 SLC12A5Q9H2X9 1139 aa13.13□□□□□ -0.31
SQSTM1P1-201ENST00000603451 ABCC6O95255 1503 aa13.13□□□□□ -0.31
SQSTM1P1-201ENST00000603451 USP31Q70CQ4 1352 aa13.12□□□□□ -0.31
SQSTM1P1-201ENST00000603451 XPCQ01831 940 aaPredicted RBP13.12□□□□□ -0.31
SQSTM1P1-201ENST00000603451 USP19O94966 1318 aa13.12□□□□□ -0.31
SQSTM1P1-201ENST00000603451 TTC21BQ7Z4L5 1316 aa13.12□□□□□ -0.31
SQSTM1P1-201ENST00000603451 NWD2Q9ULI1 1742 aa13.11□□□□□ -0.31
SQSTM1P1-201ENST00000603451 LRP6O75581 1613 aa13.11□□□□□ -0.31
SQSTM1P1-201ENST00000603451 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.1□□□□□ -0.31
SQSTM1P1-201ENST00000603451 NSD2O96028 1365 aa13.1□□□□□ -0.31
SQSTM1P1-201ENST00000603451 PAK3O75914 559 aaPredicted RBP13.1□□□□□ -0.31
SQSTM1P1-201ENST00000603451 NLRP13Q86W25 1043 aa13.1□□□□□ -0.31
SQSTM1P1-201ENST00000603451 OVOS2A0A0J9YW53 1432 aa13.1□□□□□ -0.31
SQSTM1P1-201ENST00000603451 OVOS2Q6IE36 1432 aa13.1□□□□□ -0.31
SQSTM1P1-201ENST00000603451 WASHC2AQ641Q2 1341 aa13.1□□□□□ -0.31
SQSTM1P1-201ENST00000603451 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
SQSTM1P1-201ENST00000603451 ABTB2Q8N961 1025 aa13.09□□□□□ -0.31
SQSTM1P1-201ENST00000603451 NSD3Q9BZ95 1437 aa13.08□□□□□ -0.32
SQSTM1P1-201ENST00000603451 C11orf95C9JLR9 678 aaPredicted RBP13.08□□□□□ -0.32
SQSTM1P1-201ENST00000603451 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.32
SQSTM1P1-201ENST00000603451 CPDO75976 1380 aa13.07□□□□□ -0.32
SQSTM1P1-201ENST00000603451 KCNH5Q8NCM2 988 aa13.07□□□□□ -0.32
SQSTM1P1-201ENST00000603451 NFAT5O94916 1531 aa13.07□□□□□ -0.32
SQSTM1P1-201ENST00000603451 CGNL1Q0VF96 1302 aa13.07□□□□□ -0.32
SQSTM1P1-201ENST00000603451 LMOD2Q6P5Q4 547 aa13.06□□□□□ -0.32
SQSTM1P1-201ENST00000603451 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
SQSTM1P1-201ENST00000603451 NLRP6P59044 892 aa13.05□□□□□ -0.32
SQSTM1P1-201ENST00000603451 NPC1L1Q9UHC9 1359 aa13.05□□□□□ -0.32
SQSTM1P1-201ENST00000603451 LTN1O94822 1766 aa13.04□□□□□ -0.32
SQSTM1P1-201ENST00000603451 HAP1P54257 671 aaPredicted RBP13.04□□□□□ -0.32
SQSTM1P1-201ENST00000603451 SLIT2O94813 1529 aa13.03□□□□□ -0.32
SQSTM1P1-201ENST00000603451 NRAPQ86VF7 1730 aa13.03□□□□□ -0.32
SQSTM1P1-201ENST00000603451 POLR3GLQ9BT43 218 aa13.03□□□□□ -0.32
SQSTM1P1-201ENST00000603451 GCP02774 474 aa13.02□□□□□ -0.33
SQSTM1P1-201ENST00000603451 MEX3CQ5U5Q3 659 aaKnown RBP13.02□□□□□ -0.33
SQSTM1P1-201ENST00000603451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.02□□□□□ -0.33
SQSTM1P1-201ENST00000603451 COG3Q96JB2 828 aa13.02□□□□□ -0.33
SQSTM1P1-201ENST00000603451 CARD14Q9BXL6 1004 aa13.02□□□□□ -0.33
SQSTM1P1-201ENST00000603451 PANK3Q9H999 370 aa13.02□□□□□ -0.33
SQSTM1P1-201ENST00000603451 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.33
SQSTM1P1-201ENST00000603451 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.33
SQSTM1P1-201ENST00000603451 FYB1O15117 783 aa13.01□□□□□ -0.33
SQSTM1P1-201ENST00000603451 NME9Q86XW9 330 aa13.01□□□□□ -0.33
SQSTM1P1-201ENST00000603451 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
SQSTM1P1-201ENST00000603451 RTL1A6NKG5 1358 aa13.01□□□□□ -0.33
SQSTM1P1-201ENST00000603451 COL18A1P39060 1754 aa13.01□□□□□ -0.33
SQSTM1P1-201ENST00000603451 AATKQ6ZMQ8 1374 aa13□□□□□ -0.33
SQSTM1P1-201ENST00000603451 NUTM2BA6NNL0 878 aaPredicted RBP13□□□□□ -0.33
SQSTM1P1-201ENST00000603451 NUTM2EB1AL46 878 aaPredicted RBP13□□□□□ -0.33
SQSTM1P1-201ENST00000603451 NUTM2AQ8IVF1 878 aaPredicted RBP13□□□□□ -0.33
SQSTM1P1-201ENST00000603451 FNBP4Q8N3X1 1017 aaPredicted RBP13□□□□□ -0.33
SQSTM1P1-201ENST00000603451 BLMP54132 1417 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1P1-201ENST00000603451 KIAA0232Q92628 1395 aa12.99□□□□□ -0.33
SQSTM1P1-201ENST00000603451 ZNF772Q68DY9 489 aaPredicted RBP12.99□□□□□ -0.33
SQSTM1P1-201ENST00000603451 PRDM11Q9NQV5 511 aa12.99□□□□□ -0.33
SQSTM1P1-201ENST00000603451 PER1O15534 1290 aaPredicted RBP12.98□□□□□ -0.33
SQSTM1P1-201ENST00000603451 CABLES1Q8TDN4 633 aa12.98□□□□□ -0.33
SQSTM1P1-201ENST00000603451 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
SQSTM1P1-201ENST00000603451 SMG6Q86US8 1419 aaKnown RBP12.97□□□□□ -0.33
SQSTM1P1-201ENST00000603451 ADAMTS2O95450 1211 aa12.97□□□□□ -0.33
SQSTM1P1-201ENST00000603451 AMER1Q5JTC6 1135 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1P1-201ENST00000603451 NUTM2GQ5VZR2 741 aa12.97□□□□□ -0.33
SQSTM1P1-201ENST00000603451 ARHGEF25Q86VW2 580 aa12.97□□□□□ -0.33
SQSTM1P1-201ENST00000603451 C8orf37Q96NL8 207 aa12.97□□□□□ -0.33
SQSTM1P1-201ENST00000603451 PHF23Q9BUL5 403 aaPredicted RBP12.97□□□□□ -0.33
SQSTM1P1-201ENST00000603451 AFF2P51816 1311 aa12.96□□□□□ -0.33
SQSTM1P1-201ENST00000603451 NGLY1Q96IV0 654 aa12.96□□□□□ -0.33
SQSTM1P1-201ENST00000603451 GGNBP2Q9H3C7 697 aa12.96□□□□□ -0.33
SQSTM1P1-201ENST00000603451 COL5A2P05997 1499 aaPredicted RBP12.96□□□□□ -0.34
SQSTM1P1-201ENST00000603451 CDK12Q9NYV4 1490 aaPredicted RBP12.96□□□□□ -0.34
SQSTM1P1-201ENST00000603451 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
SQSTM1P1-201ENST00000603451 ZNF316A6NFI3 1004 aaPredicted RBP12.95□□□□□ -0.34
SQSTM1P1-201ENST00000603451 CAMTA1Q9Y6Y1 1673 aa12.95□□□□□ -0.34
SQSTM1P1-201ENST00000603451 ATRNO75882 1429 aa12.95□□□□□ -0.34
SQSTM1P1-201ENST00000603451 RGPD5Q99666 1765 aa12.94□□□□□ -0.34
SQSTM1P1-201ENST00000603451 FLT4P35916 1363 aa12.94□□□□□ -0.34
SQSTM1P1-201ENST00000603451 WNK3Q9BYP7 1800 aa12.93□□□□□ -0.34
SQSTM1P1-201ENST00000603451 FAM83GA6ND36 823 aa12.93□□□□□ -0.34
SQSTM1P1-201ENST00000603451 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
SQSTM1P1-201ENST00000603451 UNC5CLQ8IV45 518 aa12.93□□□□□ -0.34
SQSTM1P1-201ENST00000603451 ZRANB1Q9UGI0 708 aa12.93□□□□□ -0.34
SQSTM1P1-201ENST00000603451 USP21Q9UK80 565 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms