RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 AFF2P51816 1311 aa14.17□□□□□ -0.14
DDX55P1-201ENST00000603334 ATP7BP35670 1465 aa14.17□□□□□ -0.14
DDX55P1-201ENST00000603334 ITSN1Q15811 1721 aa14.17□□□□□ -0.14
DDX55P1-201ENST00000603334 CRYBG1Q9Y4K1 1723 aa14.17□□□□□ -0.14
DDX55P1-201ENST00000603334 CDCA8Q53HL2 280 aa14.16□□□□□ -0.14
DDX55P1-201ENST00000603334 PUS7Q96PZ0 661 aaKnown RBP14.16□□□□□ -0.14
DDX55P1-201ENST00000603334 CCDC61Q9Y6R9 512 aa14.16□□□□□ -0.14
DDX55P1-201ENST00000603334 PSME1Q06323 249 aa14.15□□□□□ -0.14
DDX55P1-201ENST00000603334 NUDT16Q96DE0 195 aaKnown RBP14.15□□□□□ -0.14
DDX55P1-201ENST00000603334 SPATA31A3Q5VYP0 1347 aa14.15□□□□□ -0.14
DDX55P1-201ENST00000603334 ZNF772Q68DY9 489 aaPredicted RBP14.15□□□□□ -0.14
DDX55P1-201ENST00000603334 QRICH2Q9H0J4 1663 aa14.15□□□□□ -0.14
DDX55P1-201ENST00000603334 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.14□□□□□ -0.15
DDX55P1-201ENST00000603334 TNS3Q68CZ2 1445 aa14.14□□□□□ -0.15
DDX55P1-201ENST00000603334 PLEKHG3A1L390 1219 aa14.14□□□□□ -0.15
DDX55P1-201ENST00000603334 CNGB1Q14028 1251 aaPredicted RBP14.14□□□□□ -0.15
DDX55P1-201ENST00000603334 C8orf37Q96NL8 207 aa14.14□□□□□ -0.15
DDX55P1-201ENST00000603334 ADAMTS2O95450 1211 aa14.13□□□□□ -0.15
DDX55P1-201ENST00000603334 SRPK2P78362 688 aaKnown RBP14.13□□□□□ -0.15
DDX55P1-201ENST00000603334 KRT28Q7Z3Y7 464 aa14.13□□□□□ -0.15
DDX55P1-201ENST00000603334 CDK12Q9NYV4 1490 aaPredicted RBP14.12□□□□□ -0.15
DDX55P1-201ENST00000603334 SBNO1A3KN83 1393 aa14.12□□□□□ -0.15
DDX55P1-201ENST00000603334 EP400Q96L91 3159 aa14.12□□□□□ -0.15
DDX55P1-201ENST00000603334 BCL9LQ86UU0 1499 aa14.11□□□□□ -0.15
DDX55P1-201ENST00000603334 BRD4O60885 1362 aaPredicted RBP14.11□□□□□ -0.15
DDX55P1-201ENST00000603334 ATAD2Q6PL18 1390 aa14.11□□□□□ -0.15
DDX55P1-201ENST00000603334 FNBP4Q8N3X1 1017 aaPredicted RBP14.11□□□□□ -0.15
DDX55P1-201ENST00000603334 PMFBP1Q8TBY8 1022 aa14.11□□□□□ -0.15
DDX55P1-201ENST00000603334 PLCH1Q4KWH8 1693 aa14.1□□□□□ -0.15
DDX55P1-201ENST00000603334 POLR3AO14802 1390 aaPredicted RBP14.1□□□□□ -0.15
DDX55P1-201ENST00000603334 RGS12O14924 1447 aa14.1□□□□□ -0.15
DDX55P1-201ENST00000603334 SLIT2O94813 1529 aa14.09□□□□□ -0.15
DDX55P1-201ENST00000603334 NGDNQ8NEJ9 315 aaKnown RBP14.09□□□□□ -0.15
DDX55P1-201ENST00000603334 ATRNO75882 1429 aa14.09□□□□□ -0.15
DDX55P1-201ENST00000603334 CABP2Q9NPB3 220 aa14.08□□□□□ -0.15
DDX55P1-201ENST00000603334 ARHGEF10O15013 1369 aa14.08□□□□□ -0.16
DDX55P1-201ENST00000603334 NGLY1Q96IV0 654 aa14.07□□□□□ -0.16
DDX55P1-201ENST00000603334 QTRT2Q9H974 415 aaKnown RBP14.07□□□□□ -0.16
DDX55P1-201ENST00000603334 NWD2Q9ULI1 1742 aa14.07□□□□□ -0.16
DDX55P1-201ENST00000603334 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
DDX55P1-201ENST00000603334 NRAPQ86VF7 1730 aa14.07□□□□□ -0.16
DDX55P1-201ENST00000603334 PPIP5K1Q6PFW1 1433 aa14.07□□□□□ -0.16
DDX55P1-201ENST00000603334 RXRBP28702 533 aa14.07□□□□□ -0.16
DDX55P1-201ENST00000603334 ZNF692Q9BU19 519 aaPredicted RBP14.07□□□□□ -0.16
DDX55P1-201ENST00000603334 PANK3Q9H999 370 aa14.07□□□□□ -0.16
DDX55P1-201ENST00000603334 PHRF1Q9P1Y6 1649 aaKnown RBP14.06□□□□□ -0.16
DDX55P1-201ENST00000603334 ACEP12821 1306 aa14.06□□□□□ -0.16
DDX55P1-201ENST00000603334 GLI3P10071 1580 aa14.06□□□□□ -0.16
DDX55P1-201ENST00000603334 TMC1Q8TDI8 760 aa14.06□□□□□ -0.16
DDX55P1-201ENST00000603334 CABLES1Q8TDN4 633 aa14.06□□□□□ -0.16
DDX55P1-201ENST00000603334 USP21Q9UK80 565 aa14.06□□□□□ -0.16
DDX55P1-201ENST00000603334 YTHDC1Q96MU7 727 aaKnown RBP14.05□□□□□ -0.16
DDX55P1-201ENST00000603334 CABP1Q9NZU7 370 aa14.05□□□□□ -0.16
DDX55P1-201ENST00000603334 RBM6P78332 1123 aaKnown RBP14.04□□□□□ -0.16
DDX55P1-201ENST00000603334 CCER2I3L3R5 266 aa14.03□□□□□ -0.16
DDX55P1-201ENST00000603334 PRKRIP1Q9H875 184 aaPredicted RBP14.02□□□□□ -0.16
DDX55P1-201ENST00000603334 BRWD3Q6RI45 1802 aa14.01□□□□□ -0.17
DDX55P1-201ENST00000603334 TRPC5Q9UL62 973 aaPredicted RBP14.01□□□□□ -0.17
DDX55P1-201ENST00000603334 KNSTRNQ9Y448 316 aa14.01□□□□□ -0.17
DDX55P1-201ENST00000603334 COL14A1Q05707 1796 aaKnown RBP14.01□□□□□ -0.17
DDX55P1-201ENST00000603334 AKAP12Q02952 1782 aa14□□□□□ -0.17
DDX55P1-201ENST00000603334 UPF1Q92900 1129 aaKnown RBP eCLIP14□□□□□ -0.17
DDX55P1-201ENST00000603334 TERF2IPQ9NYB0 399 aa14□□□□□ -0.17
DDX55P1-201ENST00000603334 USP6P35125 1406 aa14□□□□□ -0.17
DDX55P1-201ENST00000603334 CPSF1Q10570 1443 aaKnown RBP14□□□□□ -0.17
DDX55P1-201ENST00000603334 NRKQ7Z2Y5 1582 aa14□□□□□ -0.17
DDX55P1-201ENST00000603334 SSH2Q76I76 1423 aa13.99□□□□□ -0.17
DDX55P1-201ENST00000603334 FAM83GA6ND36 823 aa13.98□□□□□ -0.17
DDX55P1-201ENST00000603334 PAK3O75914 559 aaPredicted RBP13.98□□□□□ -0.17
DDX55P1-201ENST00000603334 CC2D1BQ5T0F9 858 aaKnown RBP13.98□□□□□ -0.17
DDX55P1-201ENST00000603334 LMOD2Q6P5Q4 547 aa13.98□□□□□ -0.17
DDX55P1-201ENST00000603334 HDGFL2Q7Z4V5 671 aaPredicted RBP13.98□□□□□ -0.17
DDX55P1-201ENST00000603334 UNC5CLQ8IV45 518 aa13.98□□□□□ -0.17
DDX55P1-201ENST00000603334 TTC21AQ8NDW8 1320 aa13.98□□□□□ -0.17
DDX55P1-201ENST00000603334 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
DDX55P1-201ENST00000603334 SLC12A5Q9H2X9 1139 aa13.98□□□□□ -0.17
DDX55P1-201ENST00000603334 PIK3C2AO00443 1686 aa13.98□□□□□ -0.17
DDX55P1-201ENST00000603334 KTN1Q86UP2 1357 aaKnown RBP13.97□□□□□ -0.17
DDX55P1-201ENST00000603334 MYOM1P52179 1685 aa13.97□□□□□ -0.17
DDX55P1-201ENST00000603334 NLRP13Q86W25 1043 aa13.97□□□□□ -0.17
DDX55P1-201ENST00000603334 GJD4Q96KN9 370 aaPredicted RBP13.97□□□□□ -0.17
DDX55P1-201ENST00000603334 LMO7Q8WWI1 1683 aa13.96□□□□□ -0.17
DDX55P1-201ENST00000603334 PER1O15534 1290 aaPredicted RBP13.96□□□□□ -0.18
DDX55P1-201ENST00000603334 HAP1P54257 671 aaPredicted RBP13.96□□□□□ -0.18
DDX55P1-201ENST00000603334 RALBP1Q15311 655 aa13.96□□□□□ -0.18
DDX55P1-201ENST00000603334 ABTB2Q8N961 1025 aa13.96□□□□□ -0.18
DDX55P1-201ENST00000603334 MON2Q7Z3U7 1717 aa13.95□□□□□ -0.18
DDX55P1-201ENST00000603334 TTC21BQ7Z4L5 1316 aa13.95□□□□□ -0.18
DDX55P1-201ENST00000603334 MRS2Q9HD23 443 aa13.94□□□□□ -0.18
DDX55P1-201ENST00000603334 USP19O94966 1318 aa13.94□□□□□ -0.18
DDX55P1-201ENST00000603334 ANKRD36BQ8N2N9 1353 aa13.94□□□□□ -0.18
DDX55P1-201ENST00000603334 EDC4Q6P2E9 1401 aaKnown RBP13.94□□□□□ -0.18
DDX55P1-201ENST00000603334 VPS72Q15906 364 aa13.93□□□□□ -0.18
DDX55P1-201ENST00000603334 CD163L1Q9NR16 1453 aa13.93□□□□□ -0.18
DDX55P1-201ENST00000603334 NUTM2GQ5VZR2 741 aa13.92□□□□□ -0.18
DDX55P1-201ENST00000603334 KIAA0232Q92628 1395 aa13.92□□□□□ -0.18
DDX55P1-201ENST00000603334 SLIT3O75094 1523 aa13.92□□□□□ -0.18
DDX55P1-201ENST00000603334 THSD7AQ9UPZ6 1657 aa13.92□□□□□ -0.18
DDX55P1-201ENST00000603334 A0A1W2PP64 1363 aa13.91□□□□□ -0.18
DDX55P1-201ENST00000603334 USP31Q70CQ4 1352 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms