RNA–Protein interactions for RNA: ENST00000602398.2

SBNO1-203, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBNO1, Length 4,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-203ENST00000602398 PLEKHO1Q53GL0 409 aaPredicted RBP11.33□□□□□ -0.6
SBNO1-203ENST00000602398 DZIP1LQ8IYY4 767 aaKnown RBP11.33□□□□□ -0.6
SBNO1-203ENST00000602398 ATP7AQ04656 1500 aa11.33□□□□□ -0.6
SBNO1-203ENST00000602398 TMPOP42166 694 aaKnown RBP11.33□□□□□ -0.6
SBNO1-203ENST00000602398 PDE3BQ13370 1112 aa11.33□□□□□ -0.6
SBNO1-203ENST00000602398 RWDD1Q9H446 243 aaPredicted RBP11.33□□□□□ -0.6
SBNO1-203ENST00000602398 NPATQ14207 1427 aa11.32□□□□□ -0.6
SBNO1-203ENST00000602398 GNAI1P63096 354 aa11.32□□□□□ -0.6
SBNO1-203ENST00000602398 ATP10AO60312 1499 aa11.32□□□□□ -0.6
SBNO1-203ENST00000602398 SLC39A6Q13433 755 aa11.32□□□□□ -0.6
SBNO1-203ENST00000602398 KRT24Q2M2I5 525 aa11.32□□□□□ -0.6
SBNO1-203ENST00000602398 NCLP19338 710 aaKnown RBP11.31□□□□□ -0.6
SBNO1-203ENST00000602398 C20orf194Q5TEA3 1177 aa11.31□□□□□ -0.6
SBNO1-203ENST00000602398 SLKQ9H2G2 1235 aaPredicted RBP11.31□□□□□ -0.6
SBNO1-203ENST00000602398 F6X3S4 739 aa11.31□□□□□ -0.6
SBNO1-203ENST00000602398 ABCA8O94911 1581 aa11.31□□□□□ -0.6
SBNO1-203ENST00000602398 WWC1Q8IX03 1113 aa11.31□□□□□ -0.6
SBNO1-203ENST00000602398 NOB1Q9ULX3 412 aaKnown RBP11.31□□□□□ -0.6
SBNO1-203ENST00000602398 BRD4O60885 1362 aaPredicted RBP11.31□□□□□ -0.6
SBNO1-203ENST00000602398 NEXNQ0ZGT2 675 aa11.31□□□□□ -0.6
SBNO1-203ENST00000602398 TCOF1Q13428 1488 aaKnown RBP11.3□□□□□ -0.6
SBNO1-203ENST00000602398 SIL1Q9H173 461 aa11.3□□□□□ -0.6
SBNO1-203ENST00000602398 PRAG1Q86YV5 1406 aa11.3□□□□□ -0.6
SBNO1-203ENST00000602398 TTC21BQ7Z4L5 1316 aa11.3□□□□□ -0.6
SBNO1-203ENST00000602398 C19orf44Q9H6X5 657 aa11.3□□□□□ -0.6
SBNO1-203ENST00000602398 UHRF1BP1Q6BDS2 1440 aa11.3□□□□□ -0.6
SBNO1-203ENST00000602398 BTBD11A6QL63 1104 aa11.3□□□□□ -0.6
SBNO1-203ENST00000602398 SCAF11Q99590 1463 aaKnown RBP11.3□□□□□ -0.6
SBNO1-203ENST00000602398 G3V3G9 751 aa11.29□□□□□ -0.6
SBNO1-203ENST00000602398 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
SBNO1-203ENST00000602398 GAS2L2Q8NHY3 880 aa11.29□□□□□ -0.6
SBNO1-203ENST00000602398 FBXW7Q969H0 707 aa11.29□□□□□ -0.6
SBNO1-203ENST00000602398 ANKRD24Q8TF21 1146 aa11.29□□□□□ -0.6
SBNO1-203ENST00000602398 ITSN2Q9NZM3 1697 aa11.29□□□□□ -0.6
SBNO1-203ENST00000602398 FAM182BQ5T319 152 aa11.28□□□□□ -0.6
SBNO1-203ENST00000602398 CASC1Q6TDU7 716 aa11.28□□□□□ -0.6
SBNO1-203ENST00000602398 CFAP43Q8NDM7 1665 aa11.28□□□□□ -0.6
SBNO1-203ENST00000602398 PHACTR3Q96KR7 559 aa11.28□□□□□ -0.6
SBNO1-203ENST00000602398 NEUROD6Q96NK8 337 aa11.28□□□□□ -0.6
SBNO1-203ENST00000602398 TOMM22Q9NS69 142 aa11.28□□□□□ -0.6
SBNO1-203ENST00000602398 RBM19Q9Y4C8 960 aaKnown RBP11.28□□□□□ -0.6
SBNO1-203ENST00000602398 MSH6P52701 1360 aa11.28□□□□□ -0.6
SBNO1-203ENST00000602398 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
SBNO1-203ENST00000602398 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
SBNO1-203ENST00000602398 POLKQ9UBT6 870 aa11.28□□□□□ -0.6
SBNO1-203ENST00000602398 PPIP5K1Q6PFW1 1433 aa11.27□□□□□ -0.6
SBNO1-203ENST00000602398 ZNF335Q9H4Z2 1342 aaPredicted RBP11.27□□□□□ -0.6
SBNO1-203ENST00000602398 FOXD4L6Q3SYB3 417 aaPredicted RBP11.27□□□□□ -0.6
SBNO1-203ENST00000602398 FOXD4L3Q6VB84 417 aaPredicted RBP11.27□□□□□ -0.6
SBNO1-203ENST00000602398 LMTK3Q96Q04 1460 aa11.27□□□□□ -0.61
SBNO1-203ENST00000602398 GCP02774 474 aa11.27□□□□□ -0.61
SBNO1-203ENST00000602398 SPINK5Q9NQ38 1064 aaPredicted RBP11.27□□□□□ -0.61
SBNO1-203ENST00000602398 METP08581 1390 aa11.26□□□□□ -0.61
SBNO1-203ENST00000602398 TOM1O60784 492 aa11.26□□□□□ -0.61
SBNO1-203ENST00000602398 KCNH5Q8NCM2 988 aa11.26□□□□□ -0.61
SBNO1-203ENST00000602398 CHMP4BQ9H444 224 aaKnown RBP11.26□□□□□ -0.61
SBNO1-203ENST00000602398 ZCCHC11Q5TAX3 1644 aaKnown RBP11.26□□□□□ -0.61
SBNO1-203ENST00000602398 CHMP4CQ96CF2 233 aa11.25□□□□□ -0.61
SBNO1-203ENST00000602398 SAMD9LQ8IVG5 1584 aa11.25□□□□□ -0.61
SBNO1-203ENST00000602398 TBX22Q9Y458 520 aa11.25□□□□□ -0.61
SBNO1-203ENST00000602398 DNMT1P26358 1616 aaKnown RBP11.24□□□□□ -0.61
SBNO1-203ENST00000602398 HMMRO75330 724 aa11.24□□□□□ -0.61
SBNO1-203ENST00000602398 FCHSD2O94868 740 aa11.24□□□□□ -0.61
SBNO1-203ENST00000602398 NFE2L2Q16236 605 aa11.24□□□□□ -0.61
SBNO1-203ENST00000602398 FAM161AQ3B820 660 aa11.24□□□□□ -0.61
SBNO1-203ENST00000602398 DMRT2Q9Y5R5 561 aa11.24□□□□□ -0.61
SBNO1-203ENST00000602398 GNAT3A8MTJ3 354 aa11.24□□□□□ -0.61
SBNO1-203ENST00000602398 EIF4A2Q14240 407 aaKnown RBP11.24□□□□□ -0.61
SBNO1-203ENST00000602398 BTG4Q9NY30 223 aa11.24□□□□□ -0.61
SBNO1-203ENST00000602398 ZNF219Q9P2Y4 722 aaPredicted RBP11.24□□□□□ -0.61
SBNO1-203ENST00000602398 A0A1W2PP64 1363 aa11.24□□□□□ -0.61
SBNO1-203ENST00000602398 HSP90AB1P08238 724 aaKnown RBP11.24□□□□□ -0.61
SBNO1-203ENST00000602398 GPTP24298 496 aa11.24□□□□□ -0.61
SBNO1-203ENST00000602398 SPG7Q9UQ90 795 aa11.24□□□□□ -0.61
SBNO1-203ENST00000602398 YTHDC2Q9H6S0 1430 aaKnown RBP11.24□□□□□ -0.61
SBNO1-203ENST00000602398 PHF14O94880 888 aa11.23□□□□□ -0.61
SBNO1-203ENST00000602398 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
SBNO1-203ENST00000602398 SLAIN2Q9P270 581 aa11.23□□□□□ -0.61
SBNO1-203ENST00000602398 TNNQ9UQP3 1299 aa11.23□□□□□ -0.61
SBNO1-203ENST00000602398 MAP3K19Q56UN5 1328 aa11.23□□□□□ -0.61
SBNO1-203ENST00000602398 MAP4K4O95819 1239 aaPredicted RBP11.23□□□□□ -0.61
SBNO1-203ENST00000602398 DUSP27Q5VZP5 1158 aa11.23□□□□□ -0.61
SBNO1-203ENST00000602398 STK11IPQ8N1F8 1099 aa11.23□□□□□ -0.61
SBNO1-203ENST00000602398 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
SBNO1-203ENST00000602398 SURF6O75683 361 aaKnown RBP11.23□□□□□ -0.61
SBNO1-203ENST00000602398 UBTFL1P0CB47 393 aaPredicted RBP11.23□□□□□ -0.61
SBNO1-203ENST00000602398 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
SBNO1-203ENST00000602398 ATP5J2-PTCD1G3V325 749 aa11.22□□□□□ -0.61
SBNO1-203ENST00000602398 KIAA1211Q6ZU35 1233 aa11.22□□□□□ -0.61
SBNO1-203ENST00000602398 TMEM2Q9UHN6 1383 aa11.22□□□□□ -0.61
SBNO1-203ENST00000602398 RAD21O60216 631 aa11.22□□□□□ -0.61
SBNO1-203ENST00000602398 DDX58O95786 925 aaKnown RBP11.22□□□□□ -0.61
SBNO1-203ENST00000602398 IL1RAPL2Q9NP60 686 aa11.22□□□□□ -0.61
SBNO1-203ENST00000602398 EXOC5O00471 708 aa11.21□□□□□ -0.61
SBNO1-203ENST00000602398 PER1O15534 1290 aaPredicted RBP11.21□□□□□ -0.61
SBNO1-203ENST00000602398 SAMD1Q6SPF0 538 aaPredicted RBP11.21□□□□□ -0.61
SBNO1-203ENST00000602398 NPHP3Q7Z494 1330 aa11.21□□□□□ -0.61
SBNO1-203ENST00000602398 EYA1Q99502 592 aa11.21□□□□□ -0.61
SBNO1-203ENST00000602398 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.61
SBNO1-203ENST00000602398 CCDC30Q5VVM6 783 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms