RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 SKAP1Q86WV1 359 aa13.72□□□□□ -0.21
ZNF558-207ENST00000601372 GOLGA6L3A6NEY3 463 aa13.72□□□□□ -0.21
ZNF558-207ENST00000601372 GSE1Q14687 1217 aa13.71□□□□□ -0.21
ZNF558-207ENST00000601372 KIF6Q6ZMV9 814 aa13.71□□□□□ -0.21
ZNF558-207ENST00000601372 GBP4Q96PP9 640 aa13.71□□□□□ -0.21
ZNF558-207ENST00000601372 MCCP23508 829 aa13.71□□□□□ -0.21
ZNF558-207ENST00000601372 BCAR3O75815 825 aa13.71□□□□□ -0.21
ZNF558-207ENST00000601372 PRKAR2BP31323 418 aa13.71□□□□□ -0.21
ZNF558-207ENST00000601372 ZNF530Q6P9A1 599 aaPredicted RBP13.71□□□□□ -0.21
ZNF558-207ENST00000601372 TRIM6-TRIM34B2RNG4 842 aa13.71□□□□□ -0.22
ZNF558-207ENST00000601372 KIAA1211Q6ZU35 1233 aa13.7□□□□□ -0.22
ZNF558-207ENST00000601372 FKBP5Q13451 457 aaPredicted RBP13.7□□□□□ -0.22
ZNF558-207ENST00000601372 C8orf37Q96NL8 207 aa13.7□□□□□ -0.22
ZNF558-207ENST00000601372 NEO1Q92859 1461 aa13.69□□□□□ -0.22
ZNF558-207ENST00000601372 VPS37DQ86XT2 251 aa13.69□□□□□ -0.22
ZNF558-207ENST00000601372 NSD3Q9BZ95 1437 aa13.69□□□□□ -0.22
ZNF558-207ENST00000601372 ERCC6L2Q5T890 1561 aa13.69□□□□□ -0.22
ZNF558-207ENST00000601372 GNAI1P63096 354 aa13.68□□□□□ -0.22
ZNF558-207ENST00000601372 MSNP26038 577 aaKnown RBP13.68□□□□□ -0.22
ZNF558-207ENST00000601372 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.68□□□□□ -0.22
ZNF558-207ENST00000601372 DZIP1LQ8IYY4 767 aaKnown RBP13.67□□□□□ -0.22
ZNF558-207ENST00000601372 NME9Q86XW9 330 aa13.67□□□□□ -0.22
ZNF558-207ENST00000601372 USHBP1Q8N6Y0 703 aa13.67□□□□□ -0.22
ZNF558-207ENST00000601372 C14orf93Q9H972 538 aaKnown RBP13.66□□□□□ -0.22
ZNF558-207ENST00000601372 ABCA8O94911 1581 aa13.65□□□□□ -0.22
ZNF558-207ENST00000601372 KDM6BO15054 1643 aa13.64□□□□□ -0.23
ZNF558-207ENST00000601372 ARID3AQ99856 593 aa13.64□□□□□ -0.23
ZNF558-207ENST00000601372 NFKBIBQ15653 356 aa13.64□□□□□ -0.23
ZNF558-207ENST00000601372 CHRNA2Q15822 529 aa13.64□□□□□ -0.23
ZNF558-207ENST00000601372 NOL10Q9BSC4 688 aaKnown RBP13.63□□□□□ -0.23
ZNF558-207ENST00000601372 ZRSR1Q15695 479 aaKnown RBP13.63□□□□□ -0.23
ZNF558-207ENST00000601372 ZNF428Q96B54 188 aa13.63□□□□□ -0.23
ZNF558-207ENST00000601372 DNMT1P26358 1616 aaKnown RBP13.63□□□□□ -0.23
ZNF558-207ENST00000601372 ACEP12821 1306 aa13.63□□□□□ -0.23
ZNF558-207ENST00000601372 TCP11L2Q8N4U5 519 aa13.63□□□□□ -0.23
ZNF558-207ENST00000601372 TRIM34Q9BYJ4 488 aa13.63□□□□□ -0.23
ZNF558-207ENST00000601372 YEATS2Q9ULM3 1422 aa13.63□□□□□ -0.23
ZNF558-207ENST00000601372 TOMM22Q9NS69 142 aa13.62□□□□□ -0.23
ZNF558-207ENST00000601372 NPHP3Q7Z494 1330 aa13.62□□□□□ -0.23
ZNF558-207ENST00000601372 MYL6BP14649 208 aa13.62□□□□□ -0.23
ZNF558-207ENST00000601372 RPRD2Q5VT52 1461 aaKnown RBP13.62□□□□□ -0.23
ZNF558-207ENST00000601372 FOXD4L6Q3SYB3 417 aaPredicted RBP13.62□□□□□ -0.23
ZNF558-207ENST00000601372 FOXD4L3Q6VB84 417 aaPredicted RBP13.62□□□□□ -0.23
ZNF558-207ENST00000601372 RIMBP3CA6NJZ7 1639 aa13.62□□□□□ -0.23
ZNF558-207ENST00000601372 RIMBP3BA6NNM3 1639 aa13.62□□□□□ -0.23
ZNF558-207ENST00000601372 RIMBP3Q9UFD9 1639 aa13.62□□□□□ -0.23
ZNF558-207ENST00000601372 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
ZNF558-207ENST00000601372 C20orf194Q5TEA3 1177 aa13.62□□□□□ -0.23
ZNF558-207ENST00000601372 TSR2Q969E8 191 aaKnown RBP13.62□□□□□ -0.23
ZNF558-207ENST00000601372 DDX19BQ9UMR2 479 aa13.62□□□□□ -0.23
ZNF558-207ENST00000601372 LNPKQ9C0E8 428 aa13.61□□□□□ -0.23
ZNF558-207ENST00000601372 TMOD3Q9NYL9 352 aa13.61□□□□□ -0.23
ZNF558-207ENST00000601372 CFAP44Q96MT7 982 aa13.61□□□□□ -0.23
ZNF558-207ENST00000601372 TCOF1Q13428 1488 aaKnown RBP13.61□□□□□ -0.23
ZNF558-207ENST00000601372 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
ZNF558-207ENST00000601372 RILPL2Q969X0 211 aa13.61□□□□□ -0.23
ZNF558-207ENST00000601372 C19orf44Q9H6X5 657 aa13.61□□□□□ -0.23
ZNF558-207ENST00000601372 EXOC5O00471 708 aa13.6□□□□□ -0.23
ZNF558-207ENST00000601372 SCAF11Q99590 1463 aaKnown RBP13.6□□□□□ -0.23
ZNF558-207ENST00000601372 CCDC30Q5VVM6 783 aa13.6□□□□□ -0.23
ZNF558-207ENST00000601372 MAST1Q9Y2H9 1570 aa13.6□□□□□ -0.23
ZNF558-207ENST00000601372 MPRIPQ6WCQ1 1025 aa13.6□□□□□ -0.23
ZNF558-207ENST00000601372 BICDL1Q6ZP65 573 aa13.6□□□□□ -0.23
ZNF558-207ENST00000601372 CDK11BP21127 795 aaKnown RBP13.6□□□□□ -0.23
ZNF558-207ENST00000601372 BACH2Q9BYV9 841 aa13.6□□□□□ -0.23
ZNF558-207ENST00000601372 GOLGA6L4A6NEF3 574 aa13.6□□□□□ -0.23
ZNF558-207ENST00000601372 TTC37Q6PGP7 1564 aa13.59□□□□□ -0.23
ZNF558-207ENST00000601372 GNL2Q13823 731 aaKnown RBP13.59□□□□□ -0.23
ZNF558-207ENST00000601372 KCNA6P17658 529 aa13.59□□□□□ -0.23
ZNF558-207ENST00000601372 ADGBQ8N7X0 1667 aa13.59□□□□□ -0.23
ZNF558-207ENST00000601372 CABLES1Q8TDN4 633 aa13.59□□□□□ -0.23
ZNF558-207ENST00000601372 C1orf115Q9H7X2 142 aa13.58□□□□□ -0.23
ZNF558-207ENST00000601372 DRC7Q8IY82 874 aa13.58□□□□□ -0.24
ZNF558-207ENST00000601372 RAD21O60216 631 aa13.58□□□□□ -0.24
ZNF558-207ENST00000601372 API5Q9BZZ5 524 aaKnown RBP13.58□□□□□ -0.24
ZNF558-207ENST00000601372 PTMSP20962 102 aa13.57□□□□□ -0.24
ZNF558-207ENST00000601372 PDZRN3Q9UPQ7 1066 aa13.57□□□□□ -0.24
ZNF558-207ENST00000601372 EXOSC9Q06265 439 aaKnown RBP13.57□□□□□ -0.24
ZNF558-207ENST00000601372 PTCD1O75127 700 aaKnown RBP13.57□□□□□ -0.24
ZNF558-207ENST00000601372 G3BP1Q13283 466 aaKnown RBP eCLIP13.57□□□□□ -0.24
ZNF558-207ENST00000601372 PPIP5K1Q6PFW1 1433 aa13.57□□□□□ -0.24
ZNF558-207ENST00000601372 DDX11L8A8MPP1 907 aa13.56□□□□□ -0.24
ZNF558-207ENST00000601372 GNAT3A8MTJ3 354 aa13.56□□□□□ -0.24
ZNF558-207ENST00000601372 C22orf23Q9BZE7 217 aa13.56□□□□□ -0.24
ZNF558-207ENST00000601372 NOB1Q9ULX3 412 aaKnown RBP13.56□□□□□ -0.24
ZNF558-207ENST00000601372 DISP3Q9P2K9 1392 aa13.56□□□□□ -0.24
ZNF558-207ENST00000601372 HSP90B1P14625 803 aaKnown RBP13.56□□□□□ -0.24
ZNF558-207ENST00000601372 AMOTL1Q8IY63 956 aa13.55□□□□□ -0.24
ZNF558-207ENST00000601372 LRRC59Q96AG4 307 aaKnown RBP13.55□□□□□ -0.24
ZNF558-207ENST00000601372 ST18O60284 1047 aa13.55□□□□□ -0.24
ZNF558-207ENST00000601372 ANKRD24Q8TF21 1146 aa13.55□□□□□ -0.24
ZNF558-207ENST00000601372 HDGFL1Q5TGJ6 251 aa13.54□□□□□ -0.24
ZNF558-207ENST00000601372 EMILIN1Q9Y6C2 1016 aa13.54□□□□□ -0.24
ZNF558-207ENST00000601372 IFIT2P09913 472 aaKnown RBP13.54□□□□□ -0.24
ZNF558-207ENST00000601372 STARD3NLO95772 234 aa13.54□□□□□ -0.24
ZNF558-207ENST00000601372 HECW2Q9P2P5 1572 aa13.54□□□□□ -0.24
ZNF558-207ENST00000601372 CLSTN1O94985 981 aa13.54□□□□□ -0.24
ZNF558-207ENST00000601372 ZPR1O75312 459 aa13.53□□□□□ -0.24
ZNF558-207ENST00000601372 IL27Q8NEV9 243 aa13.53□□□□□ -0.24
ZNF558-207ENST00000601372 NEUROD6Q96NK8 337 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms