RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.33■■□□□ 1.16
RPS28-203ENST00000600659 CABLES1Q8TDN4 633 aa22.32■■□□□ 1.16
RPS28-203ENST00000600659 CABP1Q9NZU7 370 aa22.32■■□□□ 1.16
RPS28-203ENST00000600659 PLCH1Q4KWH8 1693 aa22.32■■□□□ 1.16
RPS28-203ENST00000600659 USP6P35125 1406 aa22.32■■□□□ 1.16
RPS28-203ENST00000600659 ATAD2Q6PL18 1390 aa22.32■■□□□ 1.16
RPS28-203ENST00000600659 CD163L1Q9NR16 1453 aa22.31■■□□□ 1.16
RPS28-203ENST00000600659 PIK3C2AO00443 1686 aa22.3■■□□□ 1.16
RPS28-203ENST00000600659 SLIT2O94813 1529 aa22.3■■□□□ 1.16
RPS28-203ENST00000600659 CPSF1Q10570 1443 aaKnown RBP22.3■■□□□ 1.16
RPS28-203ENST00000600659 FNBP4Q8N3X1 1017 aaPredicted RBP22.3■■□□□ 1.16
RPS28-203ENST00000600659 BCL9LQ86UU0 1499 aa22.29■■□□□ 1.16
RPS28-203ENST00000600659 ZNF772Q68DY9 489 aaPredicted RBP22.29■■□□□ 1.16
RPS28-203ENST00000600659 LMOD2Q6P5Q4 547 aa22.28■■□□□ 1.16
RPS28-203ENST00000600659 NWD2Q9ULI1 1742 aa22.28■■□□□ 1.16
RPS28-203ENST00000600659 BRD4O60885 1362 aaPredicted RBP22.27■■□□□ 1.16
RPS28-203ENST00000600659 NRAPQ86VF7 1730 aa22.27■■□□□ 1.16
RPS28-203ENST00000600659 NGLY1Q96IV0 654 aa22.26■■□□□ 1.15
RPS28-203ENST00000600659 ATRNO75882 1429 aa22.25■■□□□ 1.15
RPS28-203ENST00000600659 PAK3O75914 559 aaPredicted RBP22.25■■□□□ 1.15
RPS28-203ENST00000600659 PUS7Q96PZ0 661 aaKnown RBP22.24■■□□□ 1.15
RPS28-203ENST00000600659 COL14A1Q05707 1796 aaKnown RBP22.24■■□□□ 1.15
RPS28-203ENST00000600659 USP19O94966 1318 aa22.23■■□□□ 1.15
RPS28-203ENST00000600659 MYOM1P52179 1685 aa22.22■■□□□ 1.15
RPS28-203ENST00000600659 USP54Q70EL1 1684 aa22.22■■□□□ 1.15
RPS28-203ENST00000600659 SLIT3O75094 1523 aa22.22■■□□□ 1.15
RPS28-203ENST00000600659 PLEKHG5O94827 1062 aa22.22■■□□□ 1.15
RPS28-203ENST00000600659 SOCS7O14512 581 aa22.21■■□□□ 1.15
RPS28-203ENST00000600659 USP21Q9UK80 565 aa22.21■■□□□ 1.15
RPS28-203ENST00000600659 CDK12Q9NYV4 1490 aaPredicted RBP22.2■■□□□ 1.14
RPS28-203ENST00000600659 NUTM2GQ5VZR2 741 aa22.2■■□□□ 1.14
RPS28-203ENST00000600659 GLI3P10071 1580 aa22.19■■□□□ 1.14
RPS28-203ENST00000600659 FAM83GA6ND36 823 aa22.18■■□□□ 1.14
RPS28-203ENST00000600659 SLC12A5Q9H2X9 1139 aa22.18■■□□□ 1.14
RPS28-203ENST00000600659 QTRT2Q9H974 415 aaKnown RBP22.18■■□□□ 1.14
RPS28-203ENST00000600659 LMO7Q8WWI1 1683 aa22.18■■□□□ 1.14
RPS28-203ENST00000600659 RGS12O14924 1447 aa22.18■■□□□ 1.14
RPS28-203ENST00000600659 TTC21BQ7Z4L5 1316 aa22.18■■□□□ 1.14
RPS28-203ENST00000600659 A0A1W2PP64 1363 aa22.17■■□□□ 1.14
RPS28-203ENST00000600659 KTN1Q86UP2 1357 aaKnown RBP22.17■■□□□ 1.14
RPS28-203ENST00000600659 ABTB2Q8N961 1025 aa22.17■■□□□ 1.14
RPS28-203ENST00000600659 ZNF692Q9BU19 519 aaPredicted RBP22.17■■□□□ 1.14
RPS28-203ENST00000600659 HAP1P54257 671 aaPredicted RBP22.16■■□□□ 1.14
RPS28-203ENST00000600659 KIAA0232Q92628 1395 aa22.16■■□□□ 1.14
RPS28-203ENST00000600659 NINLQ9Y2I6 1382 aa22.16■■□□□ 1.14
RPS28-203ENST00000600659 RXRBP28702 533 aa22.15■■□□□ 1.14
RPS28-203ENST00000600659 TRPC5Q9UL62 973 aaPredicted RBP22.15■■□□□ 1.14
RPS28-203ENST00000600659 SLC24A1O60721 1099 aa22.14■■□□□ 1.14
RPS28-203ENST00000600659 TMF1P82094 1093 aa22.14■■□□□ 1.14
RPS28-203ENST00000600659 UNC5CLQ8IV45 518 aa22.14■■□□□ 1.14
RPS28-203ENST00000600659 COL18A1P39060 1754 aa22.13■■□□□ 1.13
RPS28-203ENST00000600659 RBM6P78332 1123 aaKnown RBP22.13■■□□□ 1.13
RPS28-203ENST00000600659 TTC21AQ8NDW8 1320 aa22.13■■□□□ 1.13
RPS28-203ENST00000600659 TMC1Q8TDI8 760 aa22.12■■□□□ 1.13
RPS28-203ENST00000600659 CPDO75976 1380 aa22.12■■□□□ 1.13
RPS28-203ENST00000600659 EDC4Q6P2E9 1401 aaKnown RBP22.12■■□□□ 1.13
RPS28-203ENST00000600659 NFAT5O94916 1531 aa22.12■■□□□ 1.13
RPS28-203ENST00000600659 NLRP13Q86W25 1043 aa22.11■■□□□ 1.13
RPS28-203ENST00000600659 CAMTA1Q9Y6Y1 1673 aa22.1■■□□□ 1.13
RPS28-203ENST00000600659 GCP02774 474 aa22.09■■□□□ 1.13
RPS28-203ENST00000600659 HSPA5P11021 654 aaKnown RBP22.09■■□□□ 1.13
RPS28-203ENST00000600659 NLRP6P59044 892 aa22.09■■□□□ 1.13
RPS28-203ENST00000600659 ZC3H6P61129 1189 aaKnown RBP22.09■■□□□ 1.13
RPS28-203ENST00000600659 USP31Q70CQ4 1352 aa22.09■■□□□ 1.13
RPS28-203ENST00000600659 ANKRD36BQ8N2N9 1353 aa22.09■■□□□ 1.13
RPS28-203ENST00000600659 BTG4Q9NY30 223 aa22.08■■□□□ 1.13
RPS28-203ENST00000600659 OVOS2A0A0J9YW53 1432 aa22.08■■□□□ 1.12
RPS28-203ENST00000600659 OVOS2Q6IE36 1432 aa22.08■■□□□ 1.12
RPS28-203ENST00000600659 CHRNA2Q15822 529 aa22.07■■□□□ 1.12
RPS28-203ENST00000600659 VPS72Q15906 364 aa22.07■■□□□ 1.12
RPS28-203ENST00000600659 GJD4Q96KN9 370 aaPredicted RBP22.07■■□□□ 1.12
RPS28-203ENST00000600659 PRDM11Q9NQV5 511 aa22.07■■□□□ 1.12
RPS28-203ENST00000600659 ZRANB1Q9UGI0 708 aa22.07■■□□□ 1.12
RPS28-203ENST00000600659 BRWD3Q6RI45 1802 aa22.07■■□□□ 1.12
RPS28-203ENST00000600659 EIF4G2P78344 907 aaKnown RBP eCLIP22.06■■□□□ 1.12
RPS28-203ENST00000600659 HDGFL2Q7Z4V5 671 aaPredicted RBP22.06■■□□□ 1.12
RPS28-203ENST00000600659 RGPD5Q99666 1765 aa22.06■■□□□ 1.12
RPS28-203ENST00000600659 NME9Q86XW9 330 aa22.06■■□□□ 1.12
RPS28-203ENST00000600659 TERF2IPQ9NYB0 399 aa22.06■■□□□ 1.12
RPS28-203ENST00000600659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.05■■□□□ 1.12
RPS28-203ENST00000600659 LTN1O94822 1766 aa22.04■■□□□ 1.12
RPS28-203ENST00000600659 KIF20BQ96Q89 1820 aa22.03■■□□□ 1.12
RPS28-203ENST00000600659 COL5A2P05997 1499 aaPredicted RBP22.03■■□□□ 1.12
RPS28-203ENST00000600659 THSD7AQ9UPZ6 1657 aa22.02■■□□□ 1.12
RPS28-203ENST00000600659 CDCA8Q53HL2 280 aa22.02■■□□□ 1.12
RPS28-203ENST00000600659 ABCC6O95255 1503 aa22■■□□□ 1.11
RPS28-203ENST00000600659 EP400Q96L91 3159 aa22■■□□□ 1.11
RPS28-203ENST00000600659 C11orf95C9JLR9 678 aaPredicted RBP22■■□□□ 1.11
RPS28-203ENST00000600659 AATKQ6ZMQ8 1374 aa21.99■■□□□ 1.11
RPS28-203ENST00000600659 SPATA31A5Q5VU36 1347 aa21.99■■□□□ 1.11
RPS28-203ENST00000600659 SPATA31A7Q8IWB4 1347 aa21.99■■□□□ 1.11
RPS28-203ENST00000600659 ARHGEF25Q86VW2 580 aa21.99■■□□□ 1.11
RPS28-203ENST00000600659 ONECUT3O60422 494 aaPredicted RBP21.98■■□□□ 1.11
RPS28-203ENST00000600659 KCNH5Q8NCM2 988 aa21.97■■□□□ 1.11
RPS28-203ENST00000600659 CARD14Q9BXL6 1004 aa21.97■■□□□ 1.11
RPS28-203ENST00000600659 WNK3Q9BYP7 1800 aa21.95■■□□□ 1.1
RPS28-203ENST00000600659 AXIN2Q9Y2T1 843 aa21.95■■□□□ 1.1
RPS28-203ENST00000600659 SPATA31A1Q5TZJ5 1347 aa21.95■■□□□ 1.1
RPS28-203ENST00000600659 SOX12O15370 315 aa21.94■■□□□ 1.1
RPS28-203ENST00000600659 NSD3Q9BZ95 1437 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms