RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 FMN2Q9NZ56 1722 aa26.61■■□□□ 1.85
PNKP-214ENST00000600573 AATKQ6ZMQ8 1374 aa26.61■■□□□ 1.85
PNKP-214ENST00000600573 NUTM2FA1L443 756 aa26.61■■□□□ 1.85
PNKP-214ENST00000600573 FKBP8Q14318 412 aa26.61■■□□□ 1.85
PNKP-214ENST00000600573 PROSER2Q86WR7 435 aaPredicted RBP26.61■■□□□ 1.85
PNKP-214ENST00000600573 NGDNQ8NEJ9 315 aaKnown RBP26.61■■□□□ 1.85
PNKP-214ENST00000600573 NUDCQ9Y266 331 aa26.59■■□□□ 1.85
PNKP-214ENST00000600573 SSH2Q76I76 1423 aa26.58■■□□□ 1.85
PNKP-214ENST00000600573 NME9Q86XW9 330 aa26.57■■□□□ 1.84
PNKP-214ENST00000600573 STRCQ7RTU9 1775 aa26.57■■□□□ 1.84
PNKP-214ENST00000600573 SHPRHQ149N8 1683 aa26.57■■□□□ 1.84
PNKP-214ENST00000600573 C14orf37Q86TY3 774 aa26.57■■□□□ 1.84
PNKP-214ENST00000600573 PNPLA6Q8IY17 1366 aa26.56■■□□□ 1.84
PNKP-214ENST00000600573 NALCNQ8IZF0 1738 aa26.56■■□□□ 1.84
PNKP-214ENST00000600573 C19orf44Q9H6X5 657 aa26.55■■□□□ 1.84
PNKP-214ENST00000600573 PMFBP1Q8TBY8 1022 aa26.54■■□□□ 1.84
PNKP-214ENST00000600573 PHF8Q9UPP1 1060 aa26.54■■□□□ 1.84
PNKP-214ENST00000600573 NRKQ7Z2Y5 1582 aa26.53■■□□□ 1.84
PNKP-214ENST00000600573 NCBP3Q53F19 620 aaKnown RBP26.52■■□□□ 1.84
PNKP-214ENST00000600573 POLKQ9UBT6 870 aa26.51■■□□□ 1.83
PNKP-214ENST00000600573 USP31Q70CQ4 1352 aa26.51■■□□□ 1.83
PNKP-214ENST00000600573 PNNQ9H307 717 aaKnown RBP26.5■■□□□ 1.83
PNKP-214ENST00000600573 DIAPH1O60610 1272 aaKnown RBP26.49■■□□□ 1.83
PNKP-214ENST00000600573 RUNDC1Q96C34 613 aa26.49■■□□□ 1.83
PNKP-214ENST00000600573 OVOS2A0A0J9YW53 1432 aa26.48■■□□□ 1.83
PNKP-214ENST00000600573 DCCP43146 1447 aa26.48■■□□□ 1.83
PNKP-214ENST00000600573 OVOS2Q6IE36 1432 aa26.48■■□□□ 1.83
PNKP-214ENST00000600573 COL3A1P02461 1466 aaPredicted RBP26.46■■□□□ 1.83
PNKP-214ENST00000600573 SENP3-EIF4A1A0A087X0R7 540 aa26.46■■□□□ 1.83
PNKP-214ENST00000600573 RBM33Q96EV2 1170 aaKnown RBP26.46■■□□□ 1.83
PNKP-214ENST00000600573 DMRT2Q9Y5R5 561 aa26.46■■□□□ 1.83
PNKP-214ENST00000600573 RGPD8O14715 1765 aaPredicted RBP26.45■■□□□ 1.82
PNKP-214ENST00000600573 U2AF1L5P0DN76 240 aaPredicted RBP26.44■■□□□ 1.82
PNKP-214ENST00000600573 U2AF1Q01081 240 aaKnown RBP eCLIP26.44■■□□□ 1.829e-9■■■■■ 30
PNKP-214ENST00000600573 ESCO1Q5FWF5 840 aa26.44■■□□□ 1.82
PNKP-214ENST00000600573 ZRANB1Q9UGI0 708 aa26.44■■□□□ 1.82
PNKP-214ENST00000600573 TMEM94Q12767 1356 aa26.43■■□□□ 1.82
PNKP-214ENST00000600573 CDK12Q9NYV4 1490 aaPredicted RBP26.43■■□□□ 1.82
PNKP-214ENST00000600573 ATF3P18847 181 aa26.43■■□□□ 1.82
PNKP-214ENST00000600573 ERICH6BQ5W0A0 696 aa26.42■■□□□ 1.82
PNKP-214ENST00000600573 APAF1O14727 1248 aa26.41■■□□□ 1.82
PNKP-214ENST00000600573 CADPS2Q86UW7 1296 aa26.41■■□□□ 1.82
PNKP-214ENST00000600573 CCDC146Q8IYE0 955 aa26.41■■□□□ 1.82
PNKP-214ENST00000600573 ZNF521Q96K83 1311 aa26.4■■□□□ 1.82
PNKP-214ENST00000600573 PSME1Q06323 249 aa26.4■■□□□ 1.82
PNKP-214ENST00000600573 SALL2Q9Y467 1007 aaPredicted RBP26.4■■□□□ 1.82
PNKP-214ENST00000600573 LRRC7Q96NW7 1537 aa26.38■■□□□ 1.81
PNKP-214ENST00000600573 U2SURPO15042 1029 aaKnown RBP26.38■■□□□ 1.81
PNKP-214ENST00000600573 PPM1GO15355 546 aaPredicted RBP26.38■■□□□ 1.81
PNKP-214ENST00000600573 FCHSD2O94868 740 aa26.38■■□□□ 1.81
PNKP-214ENST00000600573 PELP1Q8IZL8 1130 aaKnown RBP26.38■■□□□ 1.81
PNKP-214ENST00000600573 GOLGA2Q08379 1002 aa26.37■■□□□ 1.81
PNKP-214ENST00000600573 EMILIN1Q9Y6C2 1016 aa26.37■■□□□ 1.81
PNKP-214ENST00000600573 C1orf167Q5SNV9 1468 aa26.37■■□□□ 1.81
PNKP-214ENST00000600573 MAP2P11137 1827 aaKnown RBP26.37■■□□□ 1.81
PNKP-214ENST00000600573 RNF123Q5XPI4 1314 aa26.36■■□□□ 1.81
PNKP-214ENST00000600573 NLRP6P59044 892 aa26.36■■□□□ 1.81
PNKP-214ENST00000600573 CCDC27Q2M243 656 aa26.36■■□□□ 1.81
PNKP-214ENST00000600573 MSH6P52701 1360 aa26.36■■□□□ 1.81
PNKP-214ENST00000600573 ABTB2Q8N961 1025 aa26.36■■□□□ 1.81
PNKP-214ENST00000600573 KIF24Q5T7B8 1368 aa26.35■■□□□ 1.81
PNKP-214ENST00000600573 IL13P35225 146 aa26.34■■□□□ 1.81
PNKP-214ENST00000600573 STRCP1A6NGW2 1772 aa26.34■■□□□ 1.81
PNKP-214ENST00000600573 USP54Q70EL1 1684 aa26.33■■□□□ 1.81
PNKP-214ENST00000600573 PAK3O75914 559 aaPredicted RBP26.33■■□□□ 1.81
PNKP-214ENST00000600573 TCP11L2Q8N4U5 519 aa26.33■■□□□ 1.81
PNKP-214ENST00000600573 KIF1AQ12756 1690 aa26.33■■□□□ 1.8
PNKP-214ENST00000600573 NEFMP07197 916 aa26.32■■□□□ 1.8
PNKP-214ENST00000600573 FBLN1P23142 703 aa26.32■■□□□ 1.8
PNKP-214ENST00000600573 RRS1Q15050 365 aaKnown RBP26.32■■□□□ 1.8
PNKP-214ENST00000600573 PLEKHF1Q96S99 279 aa26.32■■□□□ 1.8
PNKP-214ENST00000600573 IQSEC2Q5JU85 1478 aa26.32■■□□□ 1.8
PNKP-214ENST00000600573 ORAI2Q96SN7 254 aa26.32■■□□□ 1.8
PNKP-214ENST00000600573 MAPK8IP3Q9UPT6 1336 aa26.31■■□□□ 1.8
PNKP-214ENST00000600573 IRX6P78412 446 aaPredicted RBP26.31■■□□□ 1.8
PNKP-214ENST00000600573 MST1RQ04912 1400 aa26.3■■□□□ 1.8
PNKP-214ENST00000600573 PIK3C2AO00443 1686 aa26.3■■□□□ 1.8
PNKP-214ENST00000600573 E9PSI1 815 aa26.29■■□□□ 1.8
PNKP-214ENST00000600573 WDR63Q8IWG1 891 aa26.29■■□□□ 1.8
PNKP-214ENST00000600573 PHF23Q9BUL5 403 aaPredicted RBP26.29■■□□□ 1.8
PNKP-214ENST00000600573 SBNO1A3KN83 1393 aa26.29■■□□□ 1.8
PNKP-214ENST00000600573 KCNH5Q8NCM2 988 aa26.28■■□□□ 1.8
PNKP-214ENST00000600573 WWC1Q8IX03 1113 aa26.28■■□□□ 1.8
PNKP-214ENST00000600573 CDCA7LQ96GN5 454 aa26.28■■□□□ 1.8
PNKP-214ENST00000600573 FOXO3O43524 673 aa26.27■■□□□ 1.8
PNKP-214ENST00000600573 SLFN5Q08AF3 891 aa26.27■■□□□ 1.8
PNKP-214ENST00000600573 FLT4P35916 1363 aa26.26■■□□□ 1.8
PNKP-214ENST00000600573 TRMT2AQ8IZ69 625 aaKnown RBP26.26■■□□□ 1.79
PNKP-214ENST00000600573 KRT28Q7Z3Y7 464 aa26.25■■□□□ 1.79
PNKP-214ENST00000600573 RCAN3Q9UKA8 241 aa26.25■■□□□ 1.79
PNKP-214ENST00000600573 MAP3K19Q56UN5 1328 aa26.25■■□□□ 1.79
PNKP-214ENST00000600573 RSPH6AQ9H0K4 717 aa26.25■■□□□ 1.79
PNKP-214ENST00000600573 ZNF335Q9H4Z2 1342 aaPredicted RBP26.24■■□□□ 1.79
PNKP-214ENST00000600573 AMPHP49418 695 aa26.23■■□□□ 1.79
PNKP-214ENST00000600573 DUSP27Q5VZP5 1158 aa26.23■■□□□ 1.79
PNKP-214ENST00000600573 TMPOP42166 694 aaKnown RBP26.22■■□□□ 1.79
PNKP-214ENST00000600573 EIF4A2Q14240 407 aaKnown RBP26.21■■□□□ 1.79
PNKP-214ENST00000600573 PPP4R2Q9NY27 417 aa26.21■■□□□ 1.79
PNKP-214ENST00000600573 NPHP3Q7Z494 1330 aa26.21■■□□□ 1.79
PNKP-214ENST00000600573 RTL1A6NKG5 1358 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms