RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 MEX3CQ5U5Q3 659 aaKnown RBP19.27■□□□□ 0.68
SNRPA-208ENST00000600456 SLC12A5Q9H2X9 1139 aa19.27■□□□□ 0.68
SNRPA-208ENST00000600456 TERF2IPQ9NYB0 399 aa19.27■□□□□ 0.68
SNRPA-208ENST00000600456 SSH2Q76I76 1423 aa19.26■□□□□ 0.67
SNRPA-208ENST00000600456 HDGFL2Q7Z4V5 671 aaPredicted RBP19.26■□□□□ 0.67
SNRPA-208ENST00000600456 PHF23Q9BUL5 403 aaPredicted RBP19.26■□□□□ 0.67
SNRPA-208ENST00000600456 CD163L1Q9NR16 1453 aa19.25■□□□□ 0.67
SNRPA-208ENST00000600456 KTN1Q86UP2 1357 aaKnown RBP19.25■□□□□ 0.67
SNRPA-208ENST00000600456 AKAP12Q02952 1782 aa19.24■□□□□ 0.67
SNRPA-208ENST00000600456 TTC21AQ8NDW8 1320 aa19.23■□□□□ 0.67
SNRPA-208ENST00000600456 ADAMTS2O95450 1211 aa19.22■□□□□ 0.67
SNRPA-208ENST00000600456 HAP1P54257 671 aaPredicted RBP19.22■□□□□ 0.67
SNRPA-208ENST00000600456 ABTB2Q8N961 1025 aa19.22■□□□□ 0.67
SNRPA-208ENST00000600456 MON2Q7Z3U7 1717 aa19.22■□□□□ 0.67
SNRPA-208ENST00000600456 TTC21BQ7Z4L5 1316 aa19.22■□□□□ 0.67
SNRPA-208ENST00000600456 A0A1W2PP64 1363 aa19.21■□□□□ 0.67
SNRPA-208ENST00000600456 ANKRD36BQ8N2N9 1353 aa19.21■□□□□ 0.67
SNRPA-208ENST00000600456 NRKQ7Z2Y5 1582 aa19.2■□□□□ 0.66
SNRPA-208ENST00000600456 EDC4Q6P2E9 1401 aaKnown RBP19.2■□□□□ 0.66
SNRPA-208ENST00000600456 NLRP13Q86W25 1043 aa19.2■□□□□ 0.66
SNRPA-208ENST00000600456 CABLES1Q8TDN4 633 aa19.2■□□□□ 0.66
SNRPA-208ENST00000600456 ZEB1P37275 1124 aaPredicted RBP19.19■□□□□ 0.66
SNRPA-208ENST00000600456 ABCA3Q99758 1704 aa19.19■□□□□ 0.66
SNRPA-208ENST00000600456 USP19O94966 1318 aa19.19■□□□□ 0.66
SNRPA-208ENST00000600456 C8orf37Q96NL8 207 aa19.18■□□□□ 0.66
SNRPA-208ENST00000600456 ZNF772Q68DY9 489 aaPredicted RBP19.17■□□□□ 0.66
SNRPA-208ENST00000600456 NGLY1Q96IV0 654 aa19.17■□□□□ 0.66
SNRPA-208ENST00000600456 CRYBG1Q9Y4K1 1723 aa19.17■□□□□ 0.66
SNRPA-208ENST00000600456 NLRP6P59044 892 aa19.16■□□□□ 0.66
SNRPA-208ENST00000600456 NUTM2GQ5VZR2 741 aa19.16■□□□□ 0.66
SNRPA-208ENST00000600456 RGS17Q9UGC6 210 aaPredicted RBP19.16■□□□□ 0.66
SNRPA-208ENST00000600456 PIK3C2AO00443 1686 aa19.15■□□□□ 0.66
SNRPA-208ENST00000600456 MYOM1P52179 1685 aa19.15■□□□□ 0.66
SNRPA-208ENST00000600456 MARF1Q9Y4F3 1742 aaKnown RBP19.15■□□□□ 0.66
SNRPA-208ENST00000600456 PLEKHG5O94827 1062 aa19.15■□□□□ 0.66
SNRPA-208ENST00000600456 FNBP4Q8N3X1 1017 aaPredicted RBP19.15■□□□□ 0.66
SNRPA-208ENST00000600456 AFF2P51816 1311 aa19.15■□□□□ 0.66
SNRPA-208ENST00000600456 USP31Q70CQ4 1352 aa19.15■□□□□ 0.66
SNRPA-208ENST00000600456 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.14■□□□□ 0.65
SNRPA-208ENST00000600456 PHRF1Q9P1Y6 1649 aaKnown RBP19.14■□□□□ 0.65
SNRPA-208ENST00000600456 C11orf95C9JLR9 678 aaPredicted RBP19.13■□□□□ 0.65
SNRPA-208ENST00000600456 POLR3GLQ9BT43 218 aa19.13■□□□□ 0.65
SNRPA-208ENST00000600456 SLIT3O75094 1523 aa19.12■□□□□ 0.65
SNRPA-208ENST00000600456 GCP02774 474 aa19.12■□□□□ 0.65
SNRPA-208ENST00000600456 CPDO75976 1380 aa19.11■□□□□ 0.65
SNRPA-208ENST00000600456 KIF7Q2M1P5 1343 aa19.11■□□□□ 0.65
SNRPA-208ENST00000600456 NME9Q86XW9 330 aa19.11■□□□□ 0.65
SNRPA-208ENST00000600456 KCNH5Q8NCM2 988 aa19.11■□□□□ 0.65
SNRPA-208ENST00000600456 SLIT2O94813 1529 aa19.1■□□□□ 0.65
SNRPA-208ENST00000600456 PRDM11Q9NQV5 511 aa19.1■□□□□ 0.65
SNRPA-208ENST00000600456 USP21Q9UK80 565 aa19.1■□□□□ 0.65
SNRPA-208ENST00000600456 USP54Q70EL1 1684 aa19.1■□□□□ 0.65
SNRPA-208ENST00000600456 KIAA0232Q92628 1395 aa19.09■□□□□ 0.65
SNRPA-208ENST00000600456 FAM83GA6ND36 823 aa19.09■□□□□ 0.65
SNRPA-208ENST00000600456 POTEAQ6S8J7 498 aa19.08■□□□□ 0.64
SNRPA-208ENST00000600456 CARD14Q9BXL6 1004 aa19.08■□□□□ 0.64
SNRPA-208ENST00000600456 COL14A1Q05707 1796 aaKnown RBP19.08■□□□□ 0.64
SNRPA-208ENST00000600456 BCL9LQ86UU0 1499 aa19.08■□□□□ 0.64
SNRPA-208ENST00000600456 OVOS2A0A0J9YW53 1432 aa19.08■□□□□ 0.64
SNRPA-208ENST00000600456 OVOS2Q6IE36 1432 aa19.08■□□□□ 0.64
SNRPA-208ENST00000600456 NSD3Q9BZ95 1437 aa19.08■□□□□ 0.64
SNRPA-208ENST00000600456 CCDC7Q96M83 1385 aa19.06■□□□□ 0.64
SNRPA-208ENST00000600456 NWD2Q9ULI1 1742 aa19.06■□□□□ 0.64
SNRPA-208ENST00000600456 ZC3H6P61129 1189 aaKnown RBP19.06■□□□□ 0.64
SNRPA-208ENST00000600456 UNC5CLQ8IV45 518 aa19.06■□□□□ 0.64
SNRPA-208ENST00000600456 TRPC5Q9UL62 973 aaPredicted RBP19.06■□□□□ 0.64
SNRPA-208ENST00000600456 COG3Q96JB2 828 aa19.05■□□□□ 0.64
SNRPA-208ENST00000600456 ZRANB1Q9UGI0 708 aa19.05■□□□□ 0.64
SNRPA-208ENST00000600456 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.05■□□□□ 0.64
SNRPA-208ENST00000600456 PLCH1Q4KWH8 1693 aa19.05■□□□□ 0.64
SNRPA-208ENST00000600456 WASHC2AQ641Q2 1341 aa19.04■□□□□ 0.64
SNRPA-208ENST00000600456 FYB1O15117 783 aa19.04■□□□□ 0.64
SNRPA-208ENST00000600456 ATRNO75882 1429 aa19.04■□□□□ 0.64
SNRPA-208ENST00000600456 QTRT2Q9H974 415 aaKnown RBP19.04■□□□□ 0.64
SNRPA-208ENST00000600456 PANK3Q9H999 370 aa19.04■□□□□ 0.64
SNRPA-208ENST00000600456 NFAT5O94916 1531 aa19.04■□□□□ 0.64
SNRPA-208ENST00000600456 CGNL1Q0VF96 1302 aa19.03■□□□□ 0.64
SNRPA-208ENST00000600456 BTG4Q9NY30 223 aa19.03■□□□□ 0.64
SNRPA-208ENST00000600456 AATKQ6ZMQ8 1374 aa19.03■□□□□ 0.64
SNRPA-208ENST00000600456 CHRNA2Q15822 529 aa19.02■□□□□ 0.64
SNRPA-208ENST00000600456 RXRBP28702 533 aa19.01■□□□□ 0.63
SNRPA-208ENST00000600456 RBM6P78332 1123 aaKnown RBP19.01■□□□□ 0.63
SNRPA-208ENST00000600456 ARHGEF25Q86VW2 580 aa19.01■□□□□ 0.63
SNRPA-208ENST00000600456 VPS72Q15906 364 aa19■□□□□ 0.63
SNRPA-208ENST00000600456 GGNBP2Q9H3C7 697 aa19■□□□□ 0.63
SNRPA-208ENST00000600456 ABCC6O95255 1503 aa19■□□□□ 0.63
SNRPA-208ENST00000600456 LMO7Q8WWI1 1683 aa18.99■□□□□ 0.63
SNRPA-208ENST00000600456 SOX12O15370 315 aa18.99■□□□□ 0.63
SNRPA-208ENST00000600456 KIF20BQ96Q89 1820 aa18.99■□□□□ 0.63
SNRPA-208ENST00000600456 NRAPQ86VF7 1730 aa18.99■□□□□ 0.63
SNRPA-208ENST00000600456 CDK12Q9NYV4 1490 aaPredicted RBP18.98■□□□□ 0.63
SNRPA-208ENST00000600456 ILDR2Q71H61 639 aa18.98■□□□□ 0.63
SNRPA-208ENST00000600456 GJD4Q96KN9 370 aaPredicted RBP18.98■□□□□ 0.63
SNRPA-208ENST00000600456 NSD2O96028 1365 aa18.97■□□□□ 0.63
SNRPA-208ENST00000600456 KNSTRNQ9Y448 316 aa18.97■□□□□ 0.63
SNRPA-208ENST00000600456 CAMTA1Q9Y6Y1 1673 aa18.97■□□□□ 0.63
SNRPA-208ENST00000600456 ZBTB7CA1YPR0 619 aa18.96■□□□□ 0.63
SNRPA-208ENST00000600456 EVA1CP58658 441 aa18.95■□□□□ 0.62
SNRPA-208ENST00000600456 COL18A1P39060 1754 aa18.94■□□□□ 0.62
SNRPA-208ENST00000600456 STRN4Q9NRL3 753 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms